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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    19
  • Reference
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • ID
    MGI:2449336
Genes
GeneAlleleAssay TypeDescription
Acy3 assembly
Tmem223 assembly
Nudt22 assembly
Keg1 assembly
Pcgf5 assembly
Stn1 assembly
Hoga1 assembly
Cpn1 assembly
Efemp2 assembly
Tmem179b assembly
Sdhaf2 assembly
Rfk assembly
Acta2 assembly
Fads1 assembly
Ankrd13d assembly
Fbxl15 assembly
Ahnak assembly
Gnaq assembly
Tmem109 assembly
Psd assembly
Rab1b assembly
Vti1a assembly
Vps51 assembly
Osbp assembly
Rbm20 assembly
Vti1a assembly
Pdcd11 assembly
Hnrnpul2 assembly
Slc18a2 assembly
Pcgf5 assembly
Ints5 assembly
1110059E24Rik assembly
Lrrn4cl assembly
Pum3 assembly
Nhlrc2 assembly
Frmd8 assembly
Mus81 assembly
Cep55 assembly
D530017H19Rik assembly
Rab3il1 assembly
Mamdc2 assembly
Dock8 assembly
Vwce assembly
1500002I01Rik assembly
Tmem179b assembly
1500015L24Rik assembly
Zdhhc16 overlapping clones, direct sequencing
Hectd2os assembly
Rnaseh2c assembly
Snx15 assembly
Snx15 assembly
1500032F14Rik assembly
B4gat1 assembly
1700001K23Rik assembly
Aldh3b1 assembly
1700008F19Rik assembly
1700010L13Rik assembly
Ccdc172 assembly
1700016H03Rik assembly
1700017D01Rik assembly
Ak3 assembly
Catsperz assembly
1700019N19Rik assembly
1700020D05Rik assembly
Gsto2 assembly
1700021N20Rik assembly
1700021P04Rik assembly
1700022C07Rik assembly
1700023D09Rik assembly
1700025F22Rik assembly
1700028P14Rik assembly
1700039E22Rik assembly
1700048J15Rik assembly
1700048O14Rik assembly
1700054A03Rik assembly
Hrasls5 assembly
Aldh3b3 assembly
Ms4a13 assembly
1700061A03Rik assembly
Hspa12a assembly
Gbf1 assembly
Ptar1 assembly
1700084K02Rik assembly
Hrasls5 assembly
1700092M07Rik assembly
Stambpl1 assembly
1700105P06Rik assembly
1700106J12Rik assembly
Tmem138 assembly
1700122C19Rik assembly
Majin assembly
E030003E18Rik assembly
Tmem258 assembly
Pnlip assembly
1810007D17Rik assembly
1810009A15Rik assembly
Entpd7 assembly
Atg2a assembly
Tsga10ip assembly
March5 assembly
1810018F18Rik assembly
Papss2 assembly
Entpd7 assembly
Ccdc186 assembly
1810018F18Rik assembly
1810035K13Rik assembly
Pik3ap1 assembly
1810018F18Rik assembly
Fam45a assembly
1810055G02Rik assembly
1810058N15Rik assembly
Tmem179b assembly
Tbc1d10c assembly
1810073G21Rik assembly
Tm9sf3 assembly
Nt5c2 assembly
Ifit1bl2 assembly
Rbm20 assembly
Eif1ad assembly
2010003K11Rik assembly
Borcs7 assembly
Ptar1 assembly
2010100M03Rik assembly
2010105D22Rik assembly
Cyp2c66 assembly
Cyp2c55 assembly
Cyp2c65 assembly
Dpf2 assembly
Zfyve27 assembly
Ttc9c assembly
Malat1 assembly
Slc25a28 assembly
2210404E10Rik assembly
Ablim1 assembly
Ms4a6c assembly
Lipn assembly
Bbip1 assembly
Cyb561a3 assembly
March5 assembly
Avpi1 assembly
Sh3pxd2a assembly
2310034G01Rik assembly
Frmd8 assembly
2310035P21Rik assembly
Mrpl16 assembly
Nudt8 assembly
Cutc assembly
Neat1 assembly
Hif1an assembly
Ahnak assembly
Lipf assembly
Myof assembly
Klf9 assembly
Zfand5 assembly
Stn1 assembly
Uhrf2 assembly
Sorbs1 assembly
Fam204a assembly
2310066F23Rik assembly
Tmem134 assembly
Dnmbp assembly
Dnmbp assembly
Sac3d1 assembly
Asrgl1 assembly
Smndc1 assembly
Pold4 assembly
Cabp4 assembly
Gucy2g assembly
2410080I02Rik assembly
Bloc1s2 assembly
2410152P15Rik assembly
Bbip1 assembly
Trub1 assembly
Fam204a assembly
2610016A17Rik assembly
Map3k11 assembly
5730408K05Rik assembly
Exosc1 assembly
Cdca5 assembly
Ccdc88b assembly
Exosc1 assembly
Smarca2 assembly
Ablim1 assembly
Fgfbp3 assembly
Sf3b2 assembly
Exosc1 assembly
2610016A17Rik assembly
Cwf19l1 assembly
Cep55 assembly
Tut1 assembly
2700046G09Rik assembly
March5 assembly
Incenp assembly
Cacul1 assembly
2700081O15Rik assembly
2700089I24Rik assembly
Entpd7 assembly
Tm9sf3 assembly
Calhm2 assembly
Zfp518a assembly
2810404I24Rik assembly
Cacul1 assembly
Erlin1 assembly
Sf3b2 assembly
Tmem216 assembly
2810449D17Rik assembly
Crtac1 assembly
2810455D13Rik assembly
2900002J02Rik assembly
Fam122a assembly
Ndufb8 assembly
2900017F05Rik assembly
Cox15 assembly
2900042A17Rik assembly
Tmem138 assembly
Cuedc2 assembly
Lcor assembly
Tm7sf2 assembly
Vps51 assembly
Pyroxd2 assembly
4122401K19Rik assembly
4430402I18Rik assembly
Cfap43 assembly
Fam111a assembly
Lipm assembly
Atl3 assembly
Cpeb3 assembly
Ablim1 assembly
4833407H14Rik assembly
4833408A19Rik assembly
Pyroxd2 assembly
Glis3 assembly
4833417J20Rik assembly
4833424O12Rik assembly
Rbm4b assembly
Atad1 assembly
Hrasls5 assembly
Vti1a assembly
4930414N06Rik assembly
Pip5k1bos assembly
Gsto2 assembly
Cfap43 assembly
Ptar1 assembly
4930433M22Rik assembly
4930442E04Rik assembly
4930447K04Rik assembly
Mfsd13a assembly
4930449E18Rik assembly
Cfap43 assembly
4930470F04Rik assembly
Rab11fip2 assembly
4930481A15Rik assembly
4930484I04Rik assembly
4930504B16Rik assembly
4930505N22Rik assembly
Shtn1 assembly
Vps13a assembly
Tctn3 assembly
4930524O05Rik assembly
4930526L06Rik assembly
Ppp6r3 assembly
Dpp3 assembly
4930535F04Rik assembly
Mfsd13a assembly
Vps13a assembly
4930552P12Rik assembly
4930554I06Rik assembly
4930557B21Rik assembly
Bbip1 assembly
Zbtb3 assembly
Ppp1r32 assembly
4931403E22Rik assembly
4931408D14Rik assembly
Trpd52l3 assembly
Frmd8 assembly
Naa40 assembly
Plpp6 assembly
Pcgf6 assembly
Arhgap19 assembly
4933411K16Rik assembly
4933412A08Rik assembly
4933413C19Rik assembly
Tmc1 assembly
Golga7b assembly
4933421H12Rik assembly
4933429K18Rik assembly
Batf2 assembly
4933436E20Rik assembly
Smndc1 assembly
Plgrkt assembly
5033423O07Rik assembly
Ms4a18 assembly
Yif1a assembly
Dpcd assembly
Hps6 assembly
Tnks2 assembly
4833407H14Rik assembly
5430440L12Rik assembly
Kdm2a assembly
5730408K05Rik assembly
5730409K12Rik assembly
5730409N24Rik assembly
Tle4 assembly
Abhd17b assembly
Cpsf7 assembly
Fra10ac1 assembly
Zdhhc24 assembly
March5 assembly
Atl3 assembly
Cep78 assembly
Pcgf5 assembly
4833407H14Rik assembly
Zfp950 assembly
Pcgf5 assembly
Dock8 assembly
Zfand5 assembly
Zdhhc6 assembly
Hps1 assembly
Peli3 assembly
Slf2 assembly
6030458E02Rik assembly
Gnaq assembly
Sorcs3 assembly
Prune2 assembly
Zfp518a assembly
Taf5 assembly
Sfr1 assembly
Apba1 assembly
Eno4 assembly
Nrxn2 assembly
2810449D17Rik assembly
6720468P15Rik assembly
Ccdc86 assembly
6820402O18Rik assembly
Klc2 assembly
8030456M14Rik assembly
Stambpl1 assembly
8430434A19Rik assembly
E030024N20Rik assembly
Trub1 assembly
9030425L15Rik assembly
9030607L02Rik assembly
9130009M17Rik assembly
Armh3 assembly
9130016M20Rik assembly
Il33 assembly
9330185G11Rik assembly
Ablim1 assembly
9430020M11Rik assembly
9430030N17Rik assembly
Malat1 assembly
Sorbs1 assembly
Pcgf5 assembly
9530025L08Rik assembly
Pgm5 assembly
9530039L23Rik assembly
Sgms1 assembly
Zfyve27 assembly
9630005C17Rik assembly
Cacul1 assembly
E330013P04Rik assembly
9930021J03Rik assembly
Plekhs1 assembly
A130015J22Rik assembly
Dock8 assembly
Prune2 assembly
A330032B11Rik assembly
Prune2 assembly
Ms4a7 assembly
Catsperz assembly
A530045L16Rik assembly
Zfp91 assembly
Lpxn assembly
Ccdc186 assembly
Lcor assembly
Hectd2 assembly
Eif3a assembly
Hif1an assembly
A830039H05Rik assembly
Rab11fip2 assembly
A830080L01Rik assembly
A930001C03Rik assembly
Fads1 assembly
A930007I19Rik assembly
Tmem216 assembly
A930026I22Rik assembly
A930028N01Rik assembly
Kank1 assembly
Mlana assembly
Wdr74 assembly
Nmrk1 assembly
A1cf assembly
Acta2 assembly
Actr1a assembly
Glyat assembly
Btaf1 assembly
Pten assembly
Macrod1 assembly
4833438C02Rik assembly
Aldh3b2 assembly
Ak3 assembly
Rhod assembly
Arl2 assembly
Asah2 assembly
1110034N17Rik assembly
Afap1l2 assembly
Vps37c assembly
Lpxn assembly
Kank1 assembly
Exoc6 assembly
C030016D13Rik assembly
E330013P04Rik assembly
Flrt1 assembly
B130024M06Rik assembly
B130065D12Rik assembly
B230104F01Rik assembly
Syt7 assembly
B230214N19Rik assembly
B230217O12Rik assembly
B230378D16Rik assembly
Sf3b2 assembly
B3gat3 assembly
Pten assembly
Trpm3 assembly
Snx32 assembly
B930096F20Rik assembly
Bad assembly
Banf1 assembly
Brms1 assembly
Ric1 assembly
C130013I19Rik assembly
Rfx3 assembly
C330002G04Rik assembly
Kif20b assembly
C330026H20Rik assembly
C430005N20Rik assembly
Anxa1 assembly
Taf6l assembly
Kmt5b assembly
C730002L08Rik assembly
Fermt3 assembly
Sfxn2 assembly
Cabp2 assembly
Cdc37l1 assembly
Chrm1 assembly
Slc15a3 assembly
Cox8a assembly
Ankrd1 assembly
Smc3 assembly
Cstf2t assembly
Ctsf assembly
Ctsw assembly
Cyp2c37 assembly
As3mt assembly
Gldc assembly
Cacul1 assembly
Slc1a1 assembly
Uhrf2 assembly
Cdk2ap2 assembly
Bbs1 assembly
Ppp6r3 assembly
Ubxn1 assembly
Xpnpep1 assembly
Vps13a assembly
Slc35g1 assembly
D430030G11Rik assembly
D430033H22Rik assembly
Ccnj assembly
D530017H19Rik assembly
Slc22a19 assembly
Doc2g assembly
D830016O14Rik assembly
D930032P07Rik assembly
D930033H10Rik assembly
Dclre1a assembly
Dnajc4 assembly
Drap1 assembly
E030003E18Rik assembly
E030024N20Rik assembly
Myof assembly
E130107B13Rik assembly
Hells assembly
March5 assembly
E230008J23Rik assembly
Glis3 assembly
E330018D03Rik assembly
E430016L07Rik assembly
Eif3a assembly
Pdcd1lg2 assembly
Acsl5 assembly
Fads2 assembly
Fads3 assembly
Fen1 assembly
Fibp assembly
Sh3pxd2a assembly
Ganab assembly
Gfra1 assembly
Gif assembly
Ptgdr2 assembly
Gsto1 assembly
Hells assembly
Ifit1 assembly
Ifit2 assembly
Insl6 assembly
Kcnk7 assembly
Kif11 assembly
Klf9 assembly
Lgi1 assembly
Loxl4 assembly
Map4k2 assembly
Mgea5 assembly
Mms19 overlapping clones, direct sequencing
Mrpl11 assembly
Mrpl43 assembly
Ms4a10 assembly
Ms4a4b assembly
Ms4a4d assembly
Ms4a6b assembly
Ms4a6c assembly
Ms4a6d assembly
Ms4a7 assembly
Ms4a8a assembly
Mta2 assembly
Tesmin assembly
Ndufv1 assembly
Nolc1 assembly
Nrxn2 assembly
Nxf1 assembly
Oosp1 assembly
Znhit2 assembly
Ovol1 assembly
Pank1 assembly
Pdlim1 assembly
Pga5 assembly
Pi4k2a assembly
Pik3ap1 assembly
Pip5k1b assembly
Plce1 assembly
Pnliprp2 assembly
Pola2 assembly
Poll assembly
Polr2g assembly
Ppp1r3c assembly
Prkg1 assembly
Aldh18a1 assembly
Tmem132a assembly
Rbm14 assembly
Rbm4 assembly
Rce1 assembly
Rcor2 assembly
Rfx3 assembly
Rcl1 assembly
Rpp30 assembly
Rps6ka4 assembly
Rps6kb2 assembly
Rtn3 assembly
Sart1 assembly
Scd3 assembly
Scyl1 assembly
Exoc6 assembly
Sfxn3 assembly
Shoc2 assembly
Slc1a1 assembly
Slc22a8 assembly
Slc29a2 assembly
Sorcs1 assembly
Sssca1 assembly
Stip1 assembly
Slk assembly
Stx3 assembly
Stx5a assembly
Syt12 assembly
Syt7 assembly
Cd248 assembly
Tjp2 assembly
Cemip2 assembly
Trpt1 assembly
Trim8 assembly
Usmg5 assembly
Best1 assembly
Vti1a assembly
Zfpl1 assembly
Aip assembly
Cdc42ep2 assembly
Pcx assembly
Slc22a6 assembly
Slc3a2 assembly
Coro1b assembly
Prdx5 assembly
Ptprcap assembly
Ehd1 assembly
Ltbp3 assembly
Pygm assembly
Dpf2 assembly
Fam89b assembly
Plcb3 assembly
Capn1 assembly
Chka assembly
Esrra assembly
Mrpl49 assembly
Ccs assembly
Cst6 assembly
Gng3 assembly
Bscl2 assembly
Ms4a1 assembly
Cd5 assembly
Cd6 assembly
Ddb1 assembly
Prpf19 assembly
Tcirg1 assembly
Gna14 assembly
Ostf1 assembly
Zfand5 assembly
Gda assembly
Gcnt1 assembly
Smarca2 assembly
Anxa1 assembly
Pcsk5 assembly
Pdcd4 assembly
Vldlr assembly
Pum3 assembly
Fas assembly
Ankrd22 assembly
Pten assembly
Gldc assembly
Ide assembly
Papss2 assembly
Minpp1 assembly
Entpd1 assembly
Frat1 assembly
Rbp4 assembly
Dntt assembly
R3hcc1l assembly
Fbxw4 assembly
Scd1 assembly
Scd2 assembly
Wnt8b assembly
Chuk assembly
Pitx3 assembly
Add3 assembly
Elovl3 assembly
Sufu assembly
Hhex assembly
Ins1 assembly
Neurl1a assembly
Mxi1 assembly
Adra2a assembly
Casp7 assembly
Wbp1l assembly
Prdx3 assembly
Adrb1 assembly
Gpam assembly
Tectb assembly
1700018L02Rik assembly
Notes
  • Reference
    The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory