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Sequence Detail
ID/Version
NG_007044 (RefSeq) Version: NG_007044.1
Sequence
description
from provider 		Mus musculus T cell receptor alpha delta locus (Tcra/tcrd@) on chromosome 14.
Provider RefSeq
Sequence
DNA 1797232 bp
For this sequence
Source
Library
Organism mouse
Strain/Species Not Specified
Sex Not Specified
Age Not Specified
Tissue Not Specified
Cell line Not Specified
Annotated genes and markers Follow the symbol links to get more information on the GO terms, expression assays, orthologs, phenotypic alleles, and other information for the genes or markers below.
Type Symbol Name GO Terms Expression
Assays		 Orthologs Phenotypic
Alleles
Pseudogene Gm17792 predicted gene, 17792 0 0 0 1
Pseudogene Gm18711 predicted gene, 18711 0 96 0 1
Pseudogene Gm3922 predicted gene 3922 0 96 0 1
Pseudogene Gm5408 predicted pseudogene 5408 0 96 0 1
Pseudogene Gm6740 predicted gene 6740 0 0 0 1
Pseudogene Gm6755 predicted gene 6755 0 96 0 1
Pseudogene Gm7122 predicted pseudogene 7122 0 0 0 1
Pseudogene Gm8704 predicted gene 8704 0 96 0 1
Pseudogene Gm9537 predicted gene 9537 0 0 0 1
Gene Or4e1 olfactory receptor family 4 subfamily E member 1 8 97 46 5
Gene Or4e2 olfactory receptor family 4 subfamily E member 2 32 99 46 3
Gene Or4e5 olfactory receptor family 4 subfamily E member 5 8 102 46 10
Pseudogene Rps19-ps1 ribosomal protein S19, pseudogene 1 0 96 0 1
Pseudogene Rps19-ps2 ribosomal protein S19, pseudogene 2 0 96 0 1
Complex/Cluster/Region Tcra T cell receptor alpha chain 12 13 0 126
Complex/Cluster/Region Tcrd T cell receptor delta chain 1 5 0 5
Gene Trac T cell receptor alpha constant 5 99 2 11
Pseudogene Traj1 T cell receptor alpha joining 1 0 96 0 2
Gene Traj11 T cell receptor alpha joining 11 0 96 0 1
Gene Traj12 T cell receptor alpha joining 12 0 96 0 1
Gene Traj13 T cell receptor alpha joining 13 0 96 0 1
Pseudogene Traj14 T cell receptor alpha joining 14 0 96 0 2
Gene Traj15 T cell receptor alpha joining 15 0 96 0 1
Gene Traj16 T cell receptor alpha joining 16 0 96 0 1
Gene Traj17 T cell receptor alpha joining 17 0 96 0 1
Gene Traj18 T cell receptor alpha joining 18 1 96 0 7
Gene Traj19 T cell receptor alpha joining 19 0 96 0 1
Gene Traj2 T cell receptor alpha joining 2 0 96 0 1
Gene Traj20 T cell receptor alpha joining 20 0 96 0 1
Gene Traj21 T cell receptor alpha joining 21 0 96 0 1
Gene Traj22 T cell receptor alpha joining 22 0 96 0 1
Gene Traj23 T cell receptor alpha joining 23 0 96 0 1
Gene Traj24 T cell receptor alpha joining 24 0 96 0 1
Gene Traj25 T cell receptor alpha joining 25 0 96 0 1
Gene Traj26 T cell receptor alpha joining 26 0 96 0 1
Gene Traj27 T cell receptor alpha joining 27 0 96 0 1
Gene Traj28 T cell receptor alpha joining 28 0 96 0 1
Gene Traj29 T cell receptor alpha joining 29 0 96 0 1
Gene Traj3 T cell receptor alpha joining 3 0 96 0 1
Gene Traj30 T cell receptor alpha joining 30 0 96 0 1
Gene Traj31 T cell receptor alpha joining 31 0 96 0 1
Gene Traj32 T cell receptor alpha joining 32 0 96 0 1
Gene Traj33 T cell receptor alpha joining 33 0 96 1 2
Gene Traj34 T cell receptor alpha joining 34 0 96 0 1
Gene Traj35 T cell receptor alpha joining 35 0 96 0 1
Pseudogene Traj36 T cell receptor alpha joining 36 0 96 0 2
Gene Traj37 T cell receptor alpha joining 37 0 96 0 1
Gene Traj38 T cell receptor alpha joining 38 0 96 1 1
Gene Traj39 T cell receptor alpha joining 39 0 96 0 1
Gene Traj4 T cell receptor alpha joining 4 0 96 0 1
Gene Traj40 T cell receptor alpha joining 40 0 96 0 1
Gene Traj41 T cell receptor alpha joining 41 0 96 0 1
Gene Traj42 T cell receptor alpha joining 42 0 96 0 1
Gene Traj43 T cell receptor alpha joining 43 0 96 0 1
Gene Traj44 T cell receptor alpha joining 44 0 96 0 1
Gene Traj45 T cell receptor alpha joining 45 0 96 0 1
Gene Traj46 T cell receptor alpha joining 46 0 96 0 1
Gene Traj47 T cell receptor alpha joining 47 0 96 0 1
Gene Traj48 T cell receptor alpha joining 48 0 96 0 1
Gene Traj49 T cell receptor alpha joining 49 0 96 0 1
Gene Traj5 T cell receptor alpha joining 5 0 96 0 1
Gene Traj50 T cell receptor alpha joining 50 0 96 0 1
Pseudogene Traj51 T cell receptor alpha joining 51 0 96 0 2
Gene Traj52 T cell receptor alpha joining 52 0 96 0 1
Gene Traj53 T cell receptor alpha joining 53 0 96 1 1
Pseudogene Traj54 T cell receptor alpha joining 54 0 96 0 2
Pseudogene Traj55 T cell receptor alpha joining 55 0 96 0 2
Gene Traj56 T cell receptor alpha joining 56 0 96 0 1
Gene Traj57 T cell receptor alpha joining 57 0 96 0 1
Gene Traj58 T cell receptor alpha joining 58 0 96 0 1
Gene Traj59 T cell receptor alpha joining 59 0 96 0 1
Gene Traj6 T cell receptor alpha joining 6 0 96 0 1
Pseudogene Traj60 T cell receptor alpha joining 60 0 96 0 2
Pseudogene Traj61 T cell receptor alpha joining 61 0 96 0 2
Gene Traj7 T cell receptor alpha joining 7 0 96 0 1
Pseudogene Traj8 T cell receptor alpha joining 8 0 96 0 2
Gene Traj9 T cell receptor alpha joining 9 0 96 0 1
Gene Trav1 T cell receptor alpha variable 1 1 96 2 3
Gene Trav10 T cell receptor alpha variable 10 1 96 11 0
Gene Trav10d T cell receptor alpha variable 10D 0 96 11 0
Gene Trav10n T cell receptor alpha variable 10N 1 96 11 0
Gene Trav11 T cell receptor alpha variable 11 1 96 1 0
Gene Trav11d T cell receptor alpha variable 11D 0 96 1 0
Pseudogene Trav11n T cell receptor alpha variable 11N 0 96 0 1
Gene Trav12-1 T cell receptor alpha variable 12-1 0 96 3 0
Gene Trav12-2 T cell receptor alpha variable 12-2 0 96 3 0
Gene Trav12-3 T cell receptor alpha variable 12-3 0 96 3 0
Pseudogene Trav12-4 T cell receptor alpha variable 12-4 0 96 0 1
Gene Trav12d-1 T cell receptor alpha variable 12D-1 0 96 3 0
Gene Trav12d-2 T cell receptor alpha variable 12D-2 0 96 3 0
Gene Trav12d-3 T cell receptor alpha variable 12D-3 0 96 3 0
Gene Trav12n-1 T cell receptor alpha variable 12N-1 0 96 3 0
Gene Trav12n-2 T cell receptor alpha variable 12N-2 0 96 3 0
Gene Trav12n-3 T cell receptor alpha variable 12N-3 0 96 3 0
Gene Trav13-1 T cell receptor alpha variable 13-1 0 96 2 0
Gene Trav13-2 T cell receptor alpha variable 13-2 0 96 2 0
Pseudogene Trav13-3 T cell receptor alpha variable 13-3 0 96 0 1
Gene Trav13-4-dv7 T cell receptor alpha variable 13-4-DV7 0 96 1 0
Gene Trav13-5 T cell receptor alpha variable 13-5 0 96 2 1
Gene Trav13d-1 T cell receptor alpha variable 13D-1 0 96 2 0
Gene Trav13d-2 T cell receptor alpha variable 13D-2 0 96 2 0
Gene Trav13d-3 T cell receptor alpha variable 13D-3 0 96 2 0
Gene Trav13d-4 T cell receptor alpha variable 13D-4 0 96 2 0
Gene Trav13n-1 T cell receptor alpha variable 13N-1 0 96 2 0
Gene Trav13n-2 T cell receptor alpha variable 13N-2 0 96 2 0
Gene Trav13n-3 T cell receptor alpha variable 13N-3 0 96 2 0
Gene Trav13n-4 T cell receptor alpha variable 13N-4 0 96 1 0
Gene Trav14-1 T cell receptor alpha variable 14-1 1 96 7 0
Gene Trav14-2 T cell receptor alpha variable 14-2 1 96 7 0
Gene Trav14-3 T cell receptor alpha variable 14-3 1 96 7 0
Gene Trav14d-1 T cell receptor alpha variable 14D-1 0 96 0 0
Gene Trav14d-2 T cell receptor alpha variable 14D-2 0 96 7 0
Gene Trav14d-3-dv8 T cell receptor alpha variable 14D-3-DV8 1 96 7 0
Gene Trav14n-1 T cell receptor alpha variable 14N-1 1 96 7 0
Gene Trav14n-2 T cell receptor alpha variable 14N-2 1 96 7 0
Gene Trav14n-3 T cell receptor alpha variable 14N-3 1 96 7 0
Gene Trav15-1-dv6-1 T cell receptor alpha variable 15-1-DV6-1 0 96 2 0
Gene Trav15-2-dv6-2 T cell receptor alpha variable 15-2-DV6-2 1 96 2 0
Pseudogene Trav15-3 T cell receptor alpha variable 15-3 0 96 0 1
Gene Trav15d-1-dv6d-1 T cell receptor alpha variable 15D-1-DV6D-1 2 96 2 0
Gene Trav15d-2-dv6d-2 T cell receptor alpha variable 15D-2-DV6D-2 0 96 2 0
Pseudogene Trav15d-3 T cell receptor alpha variable 15D-3 0 96 0 1
Gene Trav15n-1 T cell receptor alpha variable 15N-1 0 96 2 0
Gene Trav15n-2 T cell receptor alpha variable 15N-2 2 96 2 0
Pseudogene Trav15n-3 T cell receptor alpha variable 15N-3 0 96 0 1
Gene Trav16 T cell receptor alpha variable 16 2 96 2 0
Gene Trav16d-dv11 T cell receptor alpha variable 16D-DV11 2 96 2 0
Gene Trav16n T cell receptor alpha variable 16n 2 96 2 0
Gene Trav17 T cell receptor alpha variable 17 0 96 15 0
Gene Trav18 T cell receptor alpha variable 18 2 96 1 0
Gene Trav19 T cell receptor alpha variable 19 1 96 7 0
Gene Trav2 T cell receptor alpha variable 2 1 96 5 0
Pseudogene Trav20 T cell receptor alpha variable 20 0 96 0 1
Gene Trav21-dv12 T cell receptor alpha variable 21-DV12 1 96 5 0
Pseudogene Trav22 T cell receptor alpha variable 22 0 96 0 1
Pseudogene Trav23 T cell receptor alpha variable 23 1 96 1 1
Gene Trav3-1 T cell receptor alpha variable 3-1 1 96 10 0
Pseudogene Trav3-2 T cell receptor alpha variable 3-2 0 96 0 1
Gene Trav3-3 T cell receptor alpha variable 3-3 1 96 5 0
Gene Trav3-4 T cell receptor alpha variable 3-4 1 96 10 0
Gene Trav3d-2 T cell receptor alpha variable 3D-2 0 96 0 0
Gene Trav3d-3 T cell receptor alpha variable 3D-3 1 96 10 0
Gene Trav3n-2 T cell receptor alpha variable 3N-2 0 96 0 0
Gene Trav3n-3 T cell receptor alpha variable 3N-3 0 96 10 0
Pseudogene Trav4-1 T cell receptor alpha variable 4-1 0 96 0 1
Gene Trav4-2 T cell receptor alpha variable 4-2 0 96 1 0
Gene Trav4-3 T cell receptor alpha variable 4-3 0 96 0 0
Gene Trav4-4-dv10 T cell receptor alpha variable 4-4-DV10 0 96 0 0
Pseudogene Trav4d-2 T cell receptor alpha variable 4D-2 0 96 0 1
Gene Trav4d-3 T cell receptor alpha variable 4D-3 0 96 0 0
Gene Trav4d-4 T cell receptor alpha variable 4D-4 0 96 1 0
Gene Trav4n-3 T cell receptor alpha variable 4N-3 0 96 0 0
Gene Trav4n-4 T cell receptor alpha variable 4N-4 0 96 1 0
Gene Trav5-1 T cell receptor alpha variable 5-1 1 96 11 0
Pseudogene Trav5-2 T cell receptor alpha variable 5-2 0 96 0 1
Gene Trav5-4 T cell receptor alpha variable 5-4 1 96 12 0
Pseudogene Trav5d-2 T cell receptor alpha variable 5D-2 0 96 0 1
Pseudogene Trav5d-3 T cell receptor alpha variable 5D-3 0 96 0 1
Gene Trav5d-4 T cell receptor alpha variable 5D-4 1 96 12 0
Pseudogene Trav5n-2 T cell receptor alpha variable 5N-2 0 96 0 1
Pseudogene Trav5n-3 T cell receptor alpha variable 5N-3 0 96 0 1
Gene Trav5n-4 T cell receptor alpha variable 5N-4 0 96 12 0
Gene Trav6-1 T cell receptor alpha variable 6-1 0 96 3 0
Gene Trav6-2 T cell receptor alpha variable 6-2 0 96 3 0
Gene Trav6-3 T cell receptor alpha variable 6-3 0 96 3 0
Gene Trav6-4 T cell receptor alpha variable 6-4 0 96 3 0
Gene Trav6-5 T cell receptor alpha variable 6-5 0 96 11 0
Gene Trav6-6 T cell receptor alpha variable 6-6 0 96 4 0
Gene Trav6-7-dv9 T cell receptor alpha variable 6-7-DV9 0 96 3 0
Gene Trav6d-3 T cell receptor alpha variable 6D-3 0 96 3 0
Gene Trav6d-4 T cell receptor alpha variable 6D-4 0 96 3 0
Gene Trav6d-5 T cell receptor alpha variable 6D-5 0 96 11 0
Gene Trav6d-6 T cell receptor alpha variable 6D-6 0 96 4 0
Gene Trav6d-7 T cell receptor alpha variable 6D-7 0 96 3 0
Gene Trav6n-5 T cell receptor alpha variable 6N-5 0 96 11 0
Gene Trav6n-6 T cell receptor alpha variable 6N-6 0 96 4 0
Gene Trav6n-7 T cell receptor alpha variable 6N-7 0 96 3 0
Gene Trav7-1 T cell receptor alpha variable 7-1 1 96 6 0
Gene Trav7-2 T cell receptor alpha variable 7-2 4 96 9 0
Gene Trav7-3 T cell receptor alpha variable 7-3 1 96 8 0
Gene Trav7-4 T cell receptor alpha variable 7-4 1 96 9 2
Gene Trav7-5 T cell receptor alpha variable 7-5 1 96 9 0
Gene Trav7-6 T cell receptor alpha variable 7-6 1 96 9 0
Gene Trav7d-2 T cell receptor alpha variable 7D-2 0 96 9 0
Gene Trav7d-3 T cell receptor alpha variable 7D-3 0 96 8 0
Gene Trav7d-4 T cell receptor alpha variable 7D-4 1 96 9 0
Gene Trav7d-5 T cell receptor alpha variable 7D-5 0 96 9 0
Gene Trav7d-6 T cell receptor alpha variable 7D-6 1 97 6 0
Gene Trav7n-4 T cell receptor alpha variable 7N-4 1 96 9 0
Gene Trav7n-5 T cell receptor alpha variable 7N-5 1 96 9 0
Gene Trav7n-6 T cell receptor alpha variable 7N-6 0 96 6 0
Gene Trav8-1 T cell receptor alpha variable 8-1 1 96 1 0
Pseudogene Trav8-2 T-cell receptor alpha variable 8-2 0 96 0 1
Gene Trav8d-1 T cell receptor alpha variable 8D-1 1 96 1 0
Gene Trav8d-2 T cell receptor alpha variable 8D-2 1 96 1 0
Gene Trav8n-2 T cell receptor alpha variable 8n-2 1 96 1 0
Gene Trav9-1 T cell receptor alpha variable 9-1 0 96 9 0
Gene Trav9-2 T cell receptor alpha variable 9-2 0 96 17 0
Gene Trav9-4 T cell receptor alpha variable 9-4 0 96 17 0
Gene Trav9d-1 T cell receptor alpha variable 9D-1 0 96 15 0
Gene Trav9d-2 T cell receptor alpha variable 9D-2 0 96 18 0
Gene Trav9d-3 T cell receptor alpha variable 9D-3 0 96 17 0
Gene Trav9d-4 T cell receptor alpha variable 9D-4 0 96 17 0
Gene Trav9n-1 T cell receptor alpha variable 9N-1 0 96 0 0
Gene Trav9n-2 T cell receptor alpha variable 9N-2 0 96 18 0
Gene Trav9n-3 T cell receptor alpha variable 9N-3 0 96 17 0
Gene Trav9n-4 T cell receptor alpha variable 9N-4 0 96 19 0
Gene Trdc T cell receptor delta, constant region 1 97 1 3
Gene Trdd1 T cell receptor delta diversity 1 0 96 0 0
Gene Trdd2 T cell receptor delta diversity 2 0 96 0 0
Gene Trdj1 T cell receptor delta joining 1 0 96 0 0
Gene Trdj2 T cell receptor delta joining 2 0 96 1 0
Gene Trdv1 T cell receptor delta variable 1 1 96 2 0
Gene Trdv2-1 T cell receptor delta variable 2-1 2 96 3 0
Gene Trdv2-2 T cell receptor delta variable 2-2 2 96 3 0
Pseudogene Trdv3 T cell receptor delta variable 3 0 96 0 1
Gene Trdv4 T cell receptor delta variable 4 2 96 1 1
Gene Trdv5 T cell receptor delta variable 5 2 96 2 0
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory