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Trav7-3 Gene Detail
Summary
  • Symbol
    Trav7-3
  • Name
    T cell receptor alpha variable 7-3
  • Synonyms
    Gm13946
  • Feature Type
    gene segment
  • IDs
    MGI:3649556
    NCBI Gene: 547420
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:53680771-53681296 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.37 cM
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649556
gene segment Chr14:53680706-53681296 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0002496
gene segment Chr14:45597123-45597714 (+)
AKR/J MGP_AKRJ_G0002486
gene segment Chr14:47250469-47251060 (+)
BALB/cJ MGP_BALBcJ_G0002493
gene segment Chr14:45688278-45688869 (+)
C3H/HeJ MGP_C3HHeJ_G0002468
gene segment Chr14:46984958-46985549 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0002431
gene segment Chr14:43931475-43932066 (+)
CBA/J MGP_CBAJ_G0002460
gene segment Chr14:50358696-50359287 (+)
DBA/2J MGP_DBA2J_G0002469
gene segment Chr14:45333598-45334189 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0002524
gene segment Chr14:47439683-47440274 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002481
gene segment Chr14:50585611-50599767 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002616
gene segment Chr14:46575683-46576274 (+)
PWK/PhJ MGP_PWKPhJ_G0002413
gene segment Chr14:42105046-42105637 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0002463
gene segment Chr14:46875553-46876144 (+)



Homology
more
  • Human Ortholog
    TRAV12-3, T cell receptor alpha variable 12-3
  • Vertebrate Orthologs
    8
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV12-3, T cell receptor alpha variable 12-3
  • Synonyms
    TCRAV12S3, TCRAV2S2, TRAV123
  • Links
    NCBI Gene ID: 28672
    UniProt: A0A0B4J271

  • Chr Location
    14q11.2; chr14:21965451-21966061 (+)  GRCh38

Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 547420 NCBI Gene Model | MGI Sequence Detail 526 C57BL/6J ±  kb
polypeptide Q5R1I1 UniProt | EBI | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/02/2024
MGI 6.13
The Jackson Laboratory