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Traj13 Gene Detail
Summary
  • Symbol
    Traj13
  • Name
    T cell receptor alpha joining 13
  • Synonyms
    Gm16660
Location &
Maps
more
  • Sequence Map
    Chr14:54443198-54443254 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439584
 gene segment Chr14:54443198-54443254 (+)
129S1/SvImJ ENSMUSG00200044018
 gene segment Chr14:43035422-43035478 (+)
A/J ENSMUSG00195037379
 gene segment Chr14:43259697-43259753 (+)
AKR/J ENSMUSG00220035723
 gene segment Chr14:42587637-42587693 (+)
BALB/cJ ENSMUSG00180052298
 gene segment Chr14:42883460-42883516 (+)
C3H/HeJ ENSMUSG00175052325
 gene segment Chr14:44565901-44565957 (+)
C57BL/6NJ ENSMUSG00215050241
 gene segment Chr14:42765498-42765554 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002169
 gene segment Chr14:45638630-45638686 (+)
CAST/EiJ ENSTCUG00005050156
 gene segment Chr14:44562024-44562080 (+)
CBA/J ENSMUSG00210048516
 gene segment Chr14:43246465-43246521 (+)
DBA/2J ENSMUSG00185054927
 gene segment Chr14:48287155-48287211 (+)
FVB/NJ ENSMUSG00205048202
 gene segment Chr14:42629393-42629449 (+)
JF1/MsJ ENSUMUG00000055175
 gene segment Chr14:59545691-59545747 (+)
LP/J ENSMUSG00230053106
 gene segment Chr14:60401416-60401472 (+)
NOD/ShiLtJ ENSMUSG00190046908
 gene segment Chr14:42990215-42990271 (+)
NZO/HlLtJ ENSMUSG00225051326
 gene segment Chr14:50699505-50699561 (+)
PWK/PhJ ENSLUMG00010052403
 gene segment Chr14:42469523-42469579 (+)
SPRET/EiJ ENSMSPG00010048659
 gene segment Chr14:45860266-45860322 (+)
WSB/EiJ ENSIUOG00005046037
 gene segment Chr14:42461244-42461300 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100124390 NCBI Gene Model | MGI Sequence Detail 57 C57BL/6J ±  kb
polypeptide A0A0G2JER2 UniProt | EBI | MGI Sequence Detail 19 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 18
    Phenotypes 2
  • Earliest
    J:7626 Chien Y, et al., A third type of murine T-cell receptor gene. Nature. 1984 Nov 1-7;312(5989):31-5
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory