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Trav14n-3 Gene Detail
Summary
  • Symbol
    Trav14n-3
  • Name
    T cell receptor alpha variable 14N-3
  • Synonyms
    100043308, X76971
  • Feature Type
    gene segment
  • IDs
    MGI:3584039
    NCBI Gene: 100043308
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:53607534-53608032 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    4
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584039
 gene segment Chr14:53607534-53608032 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0002520
 gene segment Chr14:48147159-48454842 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0002472
 gene segment Chr14:50735305-51057017 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0002531
 gene segment Chr14:47568524-47687492 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRAV23DV6, T cell receptor alpha variable 23/delta variable 6
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV23DV6, T cell receptor alpha variable 23/delta variable 6
  • Synonyms
    hADV23S1, TCRAV17S1, TRAV23/DV6
  • Links
    NCBI Gene ID: 28660
    UniProt: A0A075B6W5

  • Chr Location
    14q11.2; chr14:22086407-22086961 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043308 NCBI Gene Model | MGI Sequence Detail 499 C57BL/6J ±  kb
transcript U07878 GenBank | ENA | DDBJ | MGI Sequence Detail 407 (SWR x NZB)F1  
polypeptide A0A075B645 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:3782535
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:16747 Tang XX, et al., Nucleotide sequences of three new members of the mouse V alpha 2 gene family. Mol Immunol. 1994 Jan;31(1):78-82
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory