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Traj27 Gene Detail
Summary
  • Symbol
    Traj27
  • Name
    T cell receptor alpha joining 27
  • Synonyms
    Gm16817
Location &
Maps
more
  • Sequence Map
    Chr14:54429760-54429818 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439741
 gene segment Chr14:54429760-54429818 (+)
129S1/SvImJ ENSMUSG00200044207
 gene segment Chr14:43021967-43022025 (+)
A/J ENSMUSG00195033633
 gene segment Chr14:43246240-43246298 (+)
AKR/J ENSMUSG00220030097
 gene segment Chr14:42574180-42574238 (+)
BALB/cJ ENSMUSG00180053477
 gene segment Chr14:42870004-42870062 (+)
C3H/HeJ ENSMUSG00175051488
 gene segment Chr14:44552447-44552505 (+)
C57BL/6NJ ENSMUSG00215049638
 gene segment Chr14:42752058-42752116 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002156
 gene segment Chr14:45625313-45625371 (+)
CAST/EiJ ENSTCUG00005050973
 gene segment Chr14:44548801-44548859 (+)
CBA/J ENSMUSG00210049279
 gene segment Chr14:43233010-43233068 (+)
DBA/2J ENSMUSG00185056168
 gene segment Chr14:48273691-48273749 (+)
FVB/NJ ENSMUSG00205043745
 gene segment Chr14:42615929-42615987 (+)
JF1/MsJ ENSUMUG00000055096
 gene segment Chr14:59532271-59532329 (+)
LP/J ENSMUSG00230052900
 gene segment Chr14:60387960-60388018 (+)
NOD/ShiLtJ ENSMUSG00190046567
 gene segment Chr14:42976753-42976811 (+)
NZO/HlLtJ ENSMUSG00225051677
 gene segment Chr14:50686051-50686109 (+)
PWK/PhJ ENSLUMG00010048542
 gene segment Chr14:42456069-42456127 (+)
SPRET/EiJ ENSMSPG00010046463
 gene segment Chr14:45846837-45846895 (+)
WSB/EiJ ENSIUOG00005043508
 gene segment Chr14:42447804-42447862 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100124362 NCBI Gene Model | MGI Sequence Detail 59 C57BL/6J ±  kb
polypeptide A0A0G2JFL6 UniProt | EBI | MGI Sequence Detail 20 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 18
    Phenotypes 2
  • Earliest
    J:7626 Chien Y, et al., A third type of murine T-cell receptor gene. Nature. 1984 Nov 1-7;312(5989):31-5
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory