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Trav12d-2 Gene Detail
Summary
  • Symbol
    Trav12d-2
  • Name
    T cell receptor alpha variable 12D-2
  • Synonyms
    ENSMUSG00000072547, Gm10888
Location &
Maps
more
  • Sequence Map
    Chr14:53153372-53153883 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642520
 gene segment Chr14:53153256-53153883 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J ENSMUSG00220032307
 gene segment Chr14:41663987-41664620 (-)
BALB/cJ ENSMUSG00180053651
 gene segment Chr14:42274452-42274875 (+)
C3H/HeJ ENSMUSG00175050835
 gene segment Chr14:43491791-43492424 (+)
C3H/HeJ ENSMUSG00175050937
 gene segment Chr14:43957665-43957715 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J ENSMUSG00185054284
 gene segment Chr14:47402288-47402927 (+)
FVB/NJ no annotation
JF1/MsJ ENSUMUG00000053384
 gene segment Chr14:58944853-58945546 (+)
LP/J ENSMUSG00230053492
 gene segment Chr14:59327871-59328496 (+)
NOD/ShiLtJ ENSMUSG00190046224
 gene segment Chr14:41850686-41851317 (+)
NZO/HlLtJ ENSMUSG00225052043
 gene segment Chr14:49625928-49626553 (+)
PWK/PhJ ENSLUMG00010049777
 gene segment Chr14:41843149-41843572 (+)
SPRET/EiJ ENSMSPG00010047529
 gene segment Chr14:45233624-45234385 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRAV18, T cell receptor alpha variable 18
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV18, T cell receptor alpha variable 18
  • Synonyms
    TCRAV18S1
  • Links
    NCBI Gene ID: 28665
    UniProt: A0A075B6X5

  • Chr Location
    14q11.2; chr14:22003106-22003673 (+)  GRCh38
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043197 NCBI Gene Model | MGI Sequence Detail 512 C57BL/6J ±  kb
polypeptide A0A0G2JF09 UniProt | EBI | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR051287 T cell receptor variable region
Molecular
Reagents
less

  • Microarray probesets 2
References
more
  • Summaries
    All 10
  • Earliest
    J:23982 Chou HS, et al., T cell receptor genes in an alloreactive CTL clone: implications for rearrangement and germline diversity of variable gene segments. EMBO J. 1986 Sep;5(9):2149-55
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory