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Trav7d-4 Gene Detail
Summary
  • Symbol
    Trav7d-4
  • Name
    T cell receptor alpha variable 7D-4
Location &
Maps
more
  • Sequence Map
    Chr14:53007320-53007849 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.08 cM
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    20
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651273
 gene segment Chr14:53007210-53007849 (+)
129S1/SvImJ ENSMUSG00200042115
 gene segment Chr14:41802392-41803031 (+)
A/J ENSMUSG00195027261
 gene segment Chr14:42035893-42036532 (+)
A/J ENSMUSG00195038850
 gene segment Chr14:42436840-42437479 (+)
AKR/J ENSMUSG00220029903
 gene segment Chr14:41390028-41390667 (+)
BALB/cJ ENSMUSG00180053815
 gene segment Chr14:42059298-42059937 (+)
BALB/cJ ENSMUSG00180053706
 gene segment Chr14:41658344-41658983 (+)
C3H/HeJ ENSMUSG00175052812
 gene segment Chr14:43741769-43742408 (+)
C3H/HeJ ENSMUSG00175051012
 gene segment Chr14:43340839-43341478 (+)
C57BL/6NJ ENSMUSG00215050694
 gene segment Chr14:42021086-42021725 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210048856
 gene segment Chr14:42014126-42014765 (+)
CBA/J ENSMUSG00210049688
 gene segment Chr14:42415002-42415641 (+)
DBA/2J no annotation
FVB/NJ no annotation
JF1/MsJ no annotation
LP/J ENSMUSG00230053586
 gene segment Chr14:59577836-59578475 (+)
LP/J ENSMUSG00230053528
 gene segment Chr14:59176943-59177582 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ ENSMUSG00225052838
 gene segment Chr14:49875890-49876529 (+)
NZO/HlLtJ ENSMUSG00225052516
 gene segment Chr14:49475009-49475648 (+)
PWK/PhJ ENSLUMG00010052475
 gene segment Chr14:41628076-41628715 (+)
PWK/PhJ ENSLUMG00010044026
 gene segment Chr14:41227159-41227798 (+)
SPRET/EiJ ENSMSPG00010047284
 gene segment Chr14:44920995-44921634 (+)
WSB/EiJ ENSIUOG00005039113
 gene segment Chr14:41405420-41406059 (+)



Homology
more
  • Human Ortholog
    TRAV12-1, T cell receptor alpha variable 12-1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV12-1, T cell receptor alpha variable 12-1
  • Synonyms
    TCRAV12S1, TCRAV2S3, TRAV121
  • Links
    NCBI Gene ID: 28674
    UniProt: A0A0B4J245

  • Chr Location
    14q11.2; chr14:21841240-21841774 (+)  GRCh38
  • Human Ortholog
    TRAV12-2, T cell receptor alpha variable 12-2
  • Synonyms
    TCRAV12S2, TCRAV2S1, TRAV122
  • Links
    NCBI Gene ID: 28673
    UniProt: A0A075B6T6

  • Chr Location
    14q11.2; chr14:21887857-21888502 (+)  GRCh38
  • Human Ortholog
    TRAV12-3, T cell receptor alpha variable 12-3
  • Synonyms
    TCRAV12S3, TCRAV2S2, TRAV123
  • Links
    NCBI Gene ID: 28672
    UniProt: A0A0B4J271

  • Chr Location
    14q11.2; chr14:21965451-21966061 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 382180 NCBI Gene Model | MGI Sequence Detail 530 C57BL/6J ±  kb
transcript AY639036 GenBank | ENA | DDBJ | MGI Sequence Detail 402 BALB/c  
polypeptide Q5R1H9 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR003599 Immunoglobulin domain subtype
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR051006 T cell receptor variable domain
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory