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Trav4-3 Gene Detail
Summary
  • Symbol
    Trav4-3
  • Name
    T cell receptor alpha variable 4-3
  • Synonyms
    Gm17002
Location &
Maps
more
  • Sequence Map
    Chr14:53836368-53836867 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.43 cM
Strain
Comparison
more
  • SNPs within 2kb
    216 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4440478
 gene segment Chr14:53836285-53836867 (+)
129S1/SvImJ ENSMUSG00200043746
 gene segment Chr14:42372715-42373298 (+)
A/J ENSMUSG00195025778
 gene segment Chr14:42170932-42171513 (+)
AKR/J no annotation
BALB/cJ ENSMUSG00180053225
 gene segment Chr14:42220312-42220895 (+)
BALB/cJ ENSMUSG00180053221
 gene segment Chr14:41793362-41793943 (+)
C3H/HeJ ENSMUSG00175052132
 gene segment Chr14:43902766-43903349 (+)
C3H/HeJ ENSMUSG00175052123
 gene segment Chr14:43475855-43476436 (+)
C57BL/6NJ ENSMUSG00215050291
 gene segment Chr14:42158828-42159410 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005050873
 gene segment Chr14:43970383-43970965 (+)
CBA/J ENSMUSG00210048640
 gene segment Chr14:42149125-42149706 (+)
DBA/2J ENSMUSG00185055821
 gene segment Chr14:47666381-47666964 (+)
DBA/2J ENSMUSG00185055805
 gene segment Chr14:47071091-47071673 (+)
DBA/2J ENSMUSG00185055814
 gene segment Chr14:47379827-47380408 (+)
FVB/NJ no annotation
JF1/MsJ ENSUMUG00000055670
 gene segment Chr14:58922366-58922948 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010051052
 gene segment Chr14:41362171-41362752 (+)
PWK/PhJ ENSLUMG00010051068
 gene segment Chr14:41789009-41789592 (+)
SPRET/EiJ ENSMSPG00010047156
 gene segment Chr14:45215061-45215644 (+)
WSB/EiJ no annotation



Homology
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Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100126471 NCBI Gene Model | MGI Sequence Detail 500 C57BL/6J ±  kb
polypeptide A0A0B4J1K1 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR051896 T cell receptor alpha variable region
References
more
  • Summaries
    All 7
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory