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Mammalian Phenotype Ontology Annotations
Query Results - Summary
341 genotypes with 478 annotations displayed of selected term and subterms
Searched Term: abnormal midbrain morphology
Allelic Composition
(Genetic Background)		 Annotated Term Reference
Adh7tm1Gdu/Adh7tm1Gdu
(B6.129(Cg)-Adh7tm1Gdu) 		abnormal substantia nigra morphology J:167234
Ambra1em1(IMPC)Bay/Ambra1em1(IMPC)Bay
(C57BL/6N-Ambra1em1(IMPC)Bay/BayMmucd) 		abnormal midbrain morphology J:211773
Anapc15tm1.1(KOMP)Vlcg/Anapc15tm1.1(KOMP)Vlcg
(B6N(Cg)-Anapc15tm1.1(KOMP)Vlcg/J) 		abnormal midbrain morphology J:211773
Ap3b1pe/Ap3b1pe
(B6.C3-Ap3b1pe/J) 		abnormal midbrain roof plate morphology J:29747
abnormal superior colliculus morphology J:12089
Apaf1Gt(IRESBetageo)XIX18Pgr/Apaf1Gt(IRESBetageo)XIX18Pgr
(involves: 129S1/Sv * 129X1/SvJ * NMRI) 		midbrain hyperplasia J:49840
ApcMin/Apctm1Tno
(involves: 129 * 129S4/SvJae * C57BL/6) 		absent midbrain J:156864
Apctm1.1Tno/Apctm1Tno
(involves: 129 * 129S4/SvJae * BALB/cJ * C57BL/6) 		absent midbrain J:156864
Apctm3Mmt/Apctm3Mmt
(involves: 129X1/SvJ * C57BL/6N) 		absent midbrain J:81402
Ascl1tm1And/Ascl1tm1And
Neurod4tm1Kag/Neurod4tm1Kag
(either: (involves: 129S2/SvPas * C57BL/6 * CBA) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA)) 		abnormal tectum morphology J:65410
small tectum J:65410
Atg5tm1Myok/Atg5tm1Myok
Tg(Nes-cre)1Kln/?
(involves: 129S/SvEv * C57BL/6 * SJL) 		abnormal inferior colliculus morphology J:110050
Atg7tm1Tchi/Atg7tm1Tchi
En1tm2(cre)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6NCrlj * CBA/JNCrlj) 		abnormal substantia nigra pars compacta morphology J:192452
Atg7tm1Tchi/Atg7tm1Tchi
Slc6a3tm1(cre)Xz/Slc6a3+
(involves: 129S1/Sv * C57BL/6NCrlj * CBA/JNCrlj) 		abnormal substantia nigra pars compacta morphology J:192452
Bag6tm1Pmc/Bag6tm1Pmc
(involves: 129S1/Sv * C57BL/6) 		abnormal midbrain morphology J:119857
Bbox1tm1b(KOMP)Wtsi/Bbox1tm1b(KOMP)Wtsi
(C57BL/6N-Bbox1tm1b(KOMP)Wtsi/Bay) 		abnormal midbrain morphology J:211773
Bcl2l1tm1.1Mam/Bcl2l1tm1.1Mam
7630403G23RikTg(Th-cre)1Tmd/?
(involves: 129S6/SvEvTac * C57BL/6 * SJL) 		decreased substantia nigra size J:99848
Bdnftm1Jae/Bdnftm1Jae
(involves: 129S4/SvJae) 		small mesencephalic trigeminal nucleus J:17123
Bdnftm1Krj/Bdnftm1Lfr
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S2/SvPas * C57BL/6 * CBA) 		abnormal substantia nigra morphology J:99291
abnormal substantia nigra pars compacta morphology J:99291
Bdnftm1Lfr/Bdnftm1Lfr
(involves: 129S2/SvPas * C57BL/6) 		small mesencephalic trigeminal nucleus J:67231
Bicd2tm1.1Hgrd/Bicd2tm1.1Hgrd
(involves: C57BL/6) 		cerebral aqueductal stenosis J:210236
Caluem1(IMPC)Tcp/Caluem1(IMPC)Tcp
(C57BL/6N-Caluem1(IMPC)Tcp/Tcp) 		abnormal midbrain morphology J:211773
Casp9tm1Flv/Casp9tm1Flv
(involves: 129S1/Sv * C57BL/6) 		increased midbrain size J:49088
Ccdc85chhy/Ccdc85chhy
(involves: BALB/cHeA * STS/A) 		abnormal midbrain morphology J:93608
cerebral aqueductal stenosis J:93608
Ccnftm1.1Sje/Ccnftm1.1Sje
(involves: 129S7/SvEvBrd * C57BL/6) 		midbrain hypoplasia J:89060
Cd247tm1Lov/Cd247tm1Lov
(involves: 129S4/SvJae) 		abnormal superior colliculus morphology J:66246
Cdc42tm1.1Rac/Cdc42tm1.1Rac
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * FVB/N * SJL) 		abnormal cerebral aqueduct morphology J:197886
cerebral aqueductal stenosis J:197886
Cdkn1ctm1Bbd/Cdkn1ctm1Bbd
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:88146
Cecr2tm2b(EUCOMM)Hmgu/Cecr2+
(C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp) 		abnormal midbrain morphology J:211773
Cecr2tm2b(EUCOMM)Hmgu/Cecr2tm2b(EUCOMM)Hmgu
(C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp) 		abnormal midbrain morphology J:211773
Cfap206tm1.2Gos/Cfap206tm1.2Gos
(involves: 129 * C57BL/6J * CD-1 * SJL) 		cerebral aqueductal stenosis J:293391
Chd7Gt(XK403)Byg/Chd7+
Fgf8tm2Mrt/Fgf8+
(involves: 129 * 129P2/OlaHsd * C57BL/6J * DBA/2J) 		abnormal inferior colliculus morphology J:207892
Chrnb2tm1Jpc/Chrnb2tm1Jpc
(B6.129P2-Chrnb2tm1Jpc) 		abnormal superior colliculus morphology J:77377
Cittm1Fdc/Cittm1Fdc
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)) 		decreased midbrain size J:77297
Cntnap4em1Smoc/Cntnap4em1Smoc
(C57BL/6J-Cntnap4em1Smoc) 		abnormal substantia nigra pars compacta morphology J:287186
Criptotm1Mms/Criptotm2Mms
(involves: 129S6/SvEvTac * C57BL/6) 		decreased midbrain size J:104418
Criptotm2Mms/Criptotm2.1Mms
(involves: 129S6/SvEvTac * C57BL/6) 		decreased midbrain size J:104418
Csnk2a1tm1Dcs/Csnk2a1tm1Dcs
(involves: 129S6/SvEvTac * C57BL/6) 		decreased midbrain size J:129208
Ctnnb1tm2Kem/Ctnnb1tm2.1Kem
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129/Sv * C57BL/6 * CBA) 		abnormal trigeminal V mesencephalic nucleus morphology J:67966
absent midbrain J:67966
Ctnnb1tm2Kem/Ctnnb1tm2Kem
Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129 * C57BL/6 * CBA/J) 		absent midbrain J:178971
Ctnnb1tm2Kem/Ctnnb1tm3Kba
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129 * C57BL/6 * CBA/J) 		abnormal midbrain morphology J:178971
Cycstm1Mak/Cycstm1Mak
(involves: C57BL/6) 		midbrain hyperplasia J:98949
Ddb1tm1Spg/Ddb1tm1Spg
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:117820
Del(5D5Mit73-D5Mit351)5Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(5D5Mit148-Qdpr)2Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(5D5Mit388-D5Mit351)4Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(5Letm1-Htt)1Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(7Coro1a-Spn)1Dolm/+
(involves: 129P2/OlaHsd * 129S1/Sv * C57BL/6N * CD-1) 		increased inferior colliculus size J:210018
increased superior colliculus size J:210018
Del(19Cyp26a1-Cyp26c1)1Hmd/Del(19Cyp26a1-Cyp26c1)1Hmd
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		midbrain hypoplasia J:119939
Del(19Poll-Dcpd)1Nmt/Del(19Poll-Dcpd)1Nmt
(involves: 129P2/OlaHsd) 		abnormal cerebral aqueduct morphology J:75779
Dennd1aem1Jgfu/Dennd1aem1Jgfu
(Not Specified) 		increased midbrain size J:276703
Dkk1tm1Lmgd/Dkk1tm1Lmgd
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		decreased midbrain size J:71787
Dlg5tm1Vv/Dlg5tm1Vv
(involves: 129 * C57BL/6) 		abnormal cerebral aqueduct morphology J:124940
Dp(10Prmt2-Pdxk)2Yey/0
Dp(16Lipi-Zbtb21)1Yey/0
Dp(17Abcg1-Rrp1b)3Yey/0
(B6.129S7-Dp(10Prmt2-Pdxk)2Yey Dp(16Lipi-Zbtb21)1Yey Dp(17Abcg1-Rrp1b)3Yey) 		cerebral aqueductal stenosis J:161325
Dscamdel17/Dscamdel17
(involves: BALB/cByJ * C57BL/6J) 		enlarged cerebral aqueduct J:222353
Dync2i1Tn(pb-Act-RFP)1.1Zhu/Dync2i1Tn(pb-Act-RFP)1.1Zhu
(involves: FVB/NJ) 		decreased midbrain size J:335806
Dync2i2Tn(pb-Act-RFP)1.1Zhu/Dync2i2Tn(pb-Act-RFP)1.1Zhu
(involves: C57BL/6 * FVB/NJ) 		decreased midbrain size J:335806
Dyrk1aem1Kzy/Dyrk1a+
(C57BL/6J-Dyrk1aem1Kzy) 		abnormal midbrain size J:259596
Dyrk1atm1Mla/Dyrk1a+
(involves: 129P2/OlaHsd * C57BL/6) 		decreased midbrain size J:78597
decreased superior colliculus size J:78597
small tectum J:78597
E2f1Tg(Wnt1-cre)2Sor/E2f1+
Snrpbem1Lajm/Snrpb+
(involves: C3H * C57BL/6 * C57BL/6J * CD1) 		midbrain hypoplasia J:326544
Eef1dtm1.2Mkma/Eef1dtm1.2Mkma
(B6J.B6N(Cg)-Eef1dtm1.2Mkma) 		midbrain atrophy J:288930
Emx2tm1Sia/Emx2tm1Sia
Otx1tm1Sia/Otx1tm1Sia
(involves: C57BL/6 * CBA) 		abnormal pretectal region morphology J:98539
Emx2tm1Sia/Emx2tm1Sia
Otx2tm1Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal midbrain morphology J:70745
abnormal pretectal region morphology J:70745
enlarged tectum J:70745
Emx2tm1Sia/Emx2tm1Sia
Pax6Sey/Pax6Sey
(involves: C57BL/6 * CBA) 		abnormal pretectal region morphology J:98539
abnormal tectum morphology J:98539
En1tm1(Otx2)Wrst/En1+
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)) 		abnormal corpora quadrigemina morphology J:57538
increased inferior colliculus size J:57538
increased superior colliculus size J:57538
En1tm1(Wnt1)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		increased inferior colliculus size J:91004
En1tm1(Wnt1)Wrst/En1tm1(Wnt1)Wrst
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		increased inferior colliculus size J:91004
En1tm1.1(Wnt1)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		increased inferior colliculus size J:91004
En1tm1Alj/En1tm1Alj
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J)) 		decreased inferior colliculus size J:19212
En1tm1Alj/En1tm1Alj
(B6.129-En1tm1Alj) 		decreased inferior colliculus size J:84363
En1tm1Alj/En1tm8.1Alj
En2tm1Alj/En2tm6Alj
Gt(ROSA)26Sortm1(cre/ERT2)Alj/Gt(ROSA)26Sor+
(involves: 129S2/SvPas * 129S6/SvEvTac * Swiss Webster) 		abnormal midbrain morphology J:156169
En1tm1Gld/En1tm1Gld
(involves: 129S/SvEv * C57BL/6) 		decreased midbrain size J:52637
En1tm2(cre)Wrst/?
Gli3tm1Alj/Gli3tm1Alj
(involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ * C57BL/6) 		abnormal tectum morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
En1tm2(cre)Wrst/?
Gli3tm1Alj/Gli3tm1Alj
Smotm2Amc/Smotm2Amc
(involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ * C57BL/6) 		abnormal tectum morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
En1tm2(cre)Wrst/En1+
Fgfr1tm1Jpa/Fgfr1tm1Jpa
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal midbrain morphology J:83004
absent inferior colliculus J:83004
En1tm2(cre)Wrst/En1+
Gbx2tm1.1Mrt/Gbx2tm1.1Alj
(involves: 129/Sv * C57BL/6 * SJL * Swiss Webster) 		increased inferior colliculus size J:79431
En1tm2(cre)Wrst/En1+
Tor1atm1Wtd/Tor1atm3.1Wtd
(involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6J) 		abnormal red nucleus morphology J:213785
En1tm2(cre)Wrst/En1+
Tor1atm2Wtd/Tor1atm3.1Wtd
(involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J * SJL) 		abnormal red nucleus morphology J:213785
En1tm2(cre)Wrst/En1tm8.1Alj
(involves: 129/Sv * Black Swiss * C57BL/6 * SJL) 		abnormal inferior colliculus morphology J:134516
En1tm2(cre)Wrst/En1tm8.1Alj
En2tm2Alj/En2+
(involves: 129/Sv * Black Swiss * C57BL/6 * SJL * Swiss Webster) 		absent inferior colliculus J:134516
decreased superior colliculus size J:134516
En1tm2(cre)Wrst/En1tm8.1Alj
En2tm2Alj/En2tm2Alj
(involves: 129/Sv * Black Swiss * C57BL/6 * SJL * Swiss Webster) 		absent colliculi J:134516
absent inferior colliculus J:134516
absent superior colliculus J:134516
absent tectum J:134516
En1tm2Alj/En1+
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		abnormal tectum morphology J:134516
absent inferior colliculus J:134516
decreased inferior colliculus size J:134516
small tectum J:134516
En1tm2Alj/En1tm2Alj
(involves: 129S1/Sv * 129X1/SvJ * Swiss Webster) 		absent inferior colliculus J:134516
decreased midbrain size J:134516
decreased superior colliculus size J:134516
En1tm2Alj/En1tm2Alj
En2tm2Alj/En2+
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		absent colliculi J:134516
absent inferior colliculus J:134516
absent superior colliculus J:134516
absent tectum J:134516
En1tm2Alj/En1tm2Alj
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		absent colliculi J:134516
absent inferior colliculus J:134516
absent midbrain J:66592
absent superior colliculus J:134516
absent tectum J:134516
En1tm2Alj/En1tm3(En2)Alj
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		decreased inferior colliculus size J:134516
En1tm4(en)Alj/En1tm4(en)Alj
(involves: 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:50311
En1tm5(en)Alj/En1+
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		decreased inferior colliculus size J:134516
En1tm5(en)Alj/En1tm5(en)Alj
(involves: 129S1/Sv * 129X1/SvJ) 		decreased midbrain size J:50311
En1tm5(en)Alj/En1tm5(en)Alj
En2tm2Alj/En2+
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		decreased inferior colliculus size J:134516
En1tm5(en)Alj/En1tm5(en)Alj
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		absent inferior colliculus J:134516
absent superior colliculus J:134516
decreased superior colliculus size J:134516
En1tm7(cre/ESR1)Alj/0
Fgf8tm1.1Jyhl/Fgf8tm1.3Mrt
(involves: 129P2/OlaHsd * 129S6/SvEvTac) 		abnormal midbrain morphology J:156717
abnormal substantia nigra morphology J:156717
En1tm7(cre/ESR1)Alj/0
Fgf8tm1.3Mrt/Fgf8tm1.4Mrt
(involves: 129P2/OlaHsd * 129S6/SvEvTac) 		abnormal midbrain morphology J:156717
abnormal substantia nigra morphology J:156717
En1tm7(cre/ESR1)Alj/En1+
En2tm2Alj/En2tm2Alj
Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+
(involves: 129S1/Sv * 129S4/SvJaeSor * 129S6/SvEvTac * 129X1/SvJ * Swiss Webster) 		abnormal tectum morphology J:134516
decreased midbrain size J:134516
En2tm1Alj/En2tm1Alj
(involves: 129/Sv * 129S2/SvPas) 		decreased colliculi size J:17203
En2tm2Alj/En2tm2Alj
(involves: 129S2/SvPas * Swiss Webster) 		decreased inferior colliculus size J:134516
Eno2tm1(DTA)Hsak/Eno2+
Tg(Gpr151-cre)#Ito/0
(involves: C57BL/6) 		abnormal midbrain morphology J:214076
Erbb3tm1Gne/Erbb3tm1Gne
(involves: 129S2/SvPas * C57BL/6) 		abnormal cerebral aqueduct morphology J:45302
abnormal midbrain morphology J:45302
Erftm1Gmav/Erftm1Gmav
(involves: 129S4/SvJae * C57BL/6 * CBA) 		midbrain hypoplasia J:123628
Esr2tm1Unc/Esr2tm1Unc
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal substantia nigra morphology J:67862
Ext1tm1Yama/Ext1tm1Yama
Tg(Nes-cre)1Kln/0
(involves: 129S5/SvEvBrd * C57BL/6 * SJL) 		absent inferior colliculus J:86465
Fbxw7tm1.1Axbe/Fbxw7tm1.1Axbe
Juntm4Wag/Jun+
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal tectum morphology J:166928
Fbxw7tm1.1Axbe/Fbxw7tm1.1Axbe
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * SJL) 		abnormal tectum morphology J:166928
Fgf8tm1.1Mrt/Fgf8tm1.1Mrt
(involves: 129P2/OlaHsd) 		absent inferior colliculus J:45909
Fgf8tm1.1Mrt/Fgf8tm1.2Mrt
(involves: 129P2/OlaHsd) 		abnormal midbrain morphology J:45909
absent inferior colliculus J:45909
Fgf8tm1.4Mrt/Fgf8+
Fgf17tm1Dor/Fgf17tm1Dor
(involves: 129P2/OlaHsd * 129S6/SvEvTac) 		decreased inferior colliculus size J:61429
Fgf8tm1.4Mrt/Fgf8+
Gli3tm1.1Alj/Gli3tm1.1Alj
(involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6) 		absent inferior colliculus J:137136
enlarged tectum J:137136
Fgf17tm1Dor/Fgf17tm1Dor
(involves: 129S6/SvEvTac) 		decreased inferior colliculus size J:61429, J:156717
Fgf17tm1Dor/Fgf17tm1Dor
Fgf8tm1.1Jyhl/Fgf8tm1.1Jyhl
(involves: 129S6/SvEvTac) 		decreased inferior colliculus size J:156717
Fgfr1tm1Jpa/Fgfr1tm1Jpa
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA) 		absent inferior colliculus J:83004
Fgfr1tm1Jrt/Fgfr1tm1Jrt
(either: (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) or (involves: 129S1/Sv * 129X1/SvJ * CD-1)) 		abnormal midbrain morphology J:22117
Fgfr1tm2Jrt/Fgfr1tm2Jrt
(involves: 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:83004
Fgfr1tm6Jrt/Fgfr1tm6Jrt
(involves: 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:83004
Fkrptm1Scbr/?
(Not Specified) 		abnormal inferior colliculus morphology J:258757
abnormal superior colliculus morphology J:258757
abnormal tectum morphology J:258757
Foxb1tm1Lby/Foxb1tm1Lby
(involves: 129S6/SvEvTac * Black Swiss) 		decreased inferior colliculus size J:67882
Foxb1tm1Lby/Foxb1tm1Lby
(B6.129S6-Foxb1tm1Lby) 		decreased inferior colliculus size J:67882
Foxb1tm1Pgr/Foxb1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:44764
decreased inferior colliculus size J:44764
Foxb1tm1Pgr/Foxb1tm1Pgr
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:44764
decreased inferior colliculus size J:44764
Foxc1ch/Foxc1ch
(involves: CBA * STOCK Tyrc f) 		abnormal cerebral aqueduct morphology J:75733
Fts/Fts
(involves: C57BL/6 * SJL) 		absent midbrain J:20159
FuzGt(AN0439)Wtsi/FuzGt(AN0439)Wtsi
(involves: 129P2/OlaHsd * C3H) 		abnormal midbrain morphology J:154370
Gas2l2tm1a(KOMP)Wtsi/Gas2l2tm1a(KOMP)Wtsi
(C57BL/6N-Gas2l2tm1a(KOMP)Wtsi/Wtsi) 		abnormal midbrain morphology J:239583
Gbx2tm1.1Mrt/Gbx2tm1.1Mrt
(either: (involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * DBA/2J) or (involves: 129S1/Sv * 129X1/SvJ * FVB/N)) 		abnormal inferior colliculus morphology J:42110
abnormal midbrain morphology J:42110
Gdf7tm2Tmj/Gdf7+
Tg(Hsp70-1-cre)6Arge/0
(involves: 129S1/Sv * C57BL/6J * CBA) 		decreased midbrain size J:60594
Gdnftm1Bbd/Gdnftm1Jlob
Tg(CAG-cre/Esr1*)5Amc/0
(involves: 129S1/Sv * C57BL/6 * CBA) 		abnormal substantia nigra morphology J:139371
abnormal tegmentum morphology J:139371
Gli3tm1.1Alj/Gli3tm1.1Alj
(involves: 129S6/SvEvTac * C57BL/6) 		abnormal inferior colliculus morphology J:137136
abnormal midbrain morphology J:137136
abnormal superior colliculus morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
Gli3tm1.1Alj/Gli3Xt
(involves: 101/H * 129S6/SvEvTac * C3H/HeH * C57BL/6 * CBA/H) 		abnormal inferior colliculus morphology J:137136
abnormal midbrain morphology J:137136
abnormal superior colliculus morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
Gli3tm1Alj/Gli3tm1Alj
Tg(Nes-cre)1Kln/?
(involves: 129S6/SvEvTac * C57BL/6 * SJL) 		enlarged tectum J:137136
Gli3Xt/Gli3Xt
(involves: 101/H * C3H/HeH * C57BL/6 * CBA/H) 		abnormal inferior colliculus morphology J:137136
abnormal midbrain morphology J:137136
abnormal superior colliculus morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
Gli3Xt/Gli3Xt
(involves: 101/H * C3H/HeH * CBA/H) 		abnormal midbrain morphology J:5049
Gnl3tm2.1Rylt/Gnl3tm2.1Rylt
Tg(Nes-cre)1Kln/0
(involves: 129 * C57BL/6 * CBA) 		abnormal tectum morphology J:198698
decreased tegmentum size J:198698
Gpr37tm2Gtva/Gpr37tm2Gtva
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal substantia nigra morphology J:91390
Gpr161tm1.2Smuk/Gpr161tm1.2Smuk
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: C57BL/6J * CBA/J) 		abnormal midbrain morphology J:316181
enlarged cerebral aqueduct J:316181
enlarged tectum J:316181
increased midbrain size J:316181
Gpr161tm1.2Smuk/Gpr161tm1.2Smuk
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * C57BL/6J * SJL) 		enlarged tectum J:316181
Grid2Lc/Grid2Lc
(B6CBACa Aw-J/A-Grid2Lc/J) 		abnormal midbrain morphology J:39109
Grntm1.1Hiok/Grn+
(involves: C57BL/6J) 		abnormal midbrain morphology J:308471
Gt(ROSA)26Sortm1(DTA)Jpmb/Gt(ROSA)26Sor+
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(either: (involves: 129S/SvEv * C57BL/6 * CBA) or (involves: 129S/SvEv * C57BL/6 * CBA * CD-1)) 		decreased midbrain size J:103417
Gt(ROSA)26Sortm1(GAP43/EGFP)Gld/Gt(ROSA)26Sor+
Ngfrtm1Klee/Ngfrtm1Klee
Tg(Pax6-cre,GFP)2Pgr/0
(involves: 129S1/Sv) 		abnormal superior colliculus morphology J:145459
H2az2Tg(Wnt1-cre)11Rth/H2az2+
Srsf3tm1Pjln/Srsf3tm1Pjln
(involves: BALB/c * C57BL/6J * CBA/J) 		decreased midbrain size J:308882
midbrain hypoplasia J:308882
Hdctm1Nagy/Hdc+
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal substantia nigra morphology J:220412
Hdctm1Nagy/Hdctm1Nagy
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal substantia nigra morphology J:220412
Hes1tm1Fgu/Hes1tm1Fgu
Hes3tm1Kag/Hes3tm1Kag
(involves: C57BL/6 * CBA * ICR) 		abnormal midbrain morphology J:71074
abnormal oculomotor nucleus morphology J:71074
Hgstn/Hgstn
(B6.C3-Hgstn) 		decreased midbrain size J:5025
HhatTg(TFAP2A-cre)1Will/HhatTg(TFAP2A-cre)1Will
(Not Specified) 		abnormal midbrain morphology J:190013
Hipk2tm1Ejh/Hipk2tm1Ejh
(involves: 129X1/SvJ * C57BL/6) 		decreased substantia nigra size J:117465
decreased tegmentum size J:117465
Hnrnph2em1Jpat/Y
(C57BL/6J-Hnrnph2em1Jpat) 		abnormal cerebral aqueduct morphology J:338313
Hnrnph2em2Jpat/Hnrnph2+
(C57BL/6J-Hnrnph2em2Jpat) 		abnormal cerebral aqueduct morphology J:338313
Hsd17b7tm1Gibo/Hsd17b7tm1Gibo
(involves: 129S1/Sv * C57BL/6) 		decreased midbrain size J:140055
midbrain hypoplasia J:140055
Htttm1Mem/Htttm7Mem
(involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * CD-1) 		abnormal cerebral aqueduct morphology J:44391
abnormal midbrain morphology J:44391
Htttm7Mem/Htttm7Mem
(involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * CD-1) 		abnormal cerebral aqueduct morphology J:44391
abnormal midbrain morphology J:44391
enlarged cerebral aqueduct J:44391
hy1/hy1
(Not Specified) 		cerebral aqueductal stenosis J:12162
Hydinhy3/Hydinhy3
(involves: CBA) 		abnormal cerebral aqueduct morphology J:5377
Hyou1tm1Oga/Hyou1+
(involves: 129S1/Sv) 		abnormal substantia nigra pars compacta morphology J:117737
Ift88cbbs/Ift88tm1.1Bky
(involves: 129P2/OlaHsd * 129S4/SvJae * C57BL/6) 		midbrain hyperplasia J:142500
Ift88fxo/Ift88fxo
(C3.B6J-Ift88fxo) 		abnormal midbrain morphology J:86437
Il6tm1Mur/Il6tm1Mur
(B6.129P2(B6)-Il6tm1Mur) 		abnormal substantia nigra pars compacta morphology J:86039
Inpp5etm1.1(KOMP)Vlcg/Inpp5etm1.1(KOMP)Vlcg
(C57BL/6N-Inpp5etm1.1(KOMP)Vlcg/MbpMmucd) 		abnormal midbrain morphology J:211773
Ireb2tm1.1Eal/Ireb2tm1.1Eal
(B6J.129-Ireb2tm1.1Eal) 		abnormal superior colliculus morphology J:217335
Ireb2tm1Roua/Ireb2tm1Roua
(involves: C57BL/6) 		abnormal corpora quadrigemina morphology J:67313
Kat2atm2Roth/Kat2atm2Roth
(involves: 129S7/SvEvBrd * C57BL/6J) 		abnormal midbrain morphology J:121357
Kat6bGt(pKC199)1Pgr/Kat6bGt(pKC199)1Pgr
(involves: 129S2/SvPas) 		decreased inferior colliculus size J:62161
KatnipGt(RRG309)Byg/KatnipGt(RRG309)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		cerebral aqueductal stenosis J:239987
Kcnj6wv/Kcnj6+
(involves: C57BL/6J) 		abnormal substantia nigra pars compacta morphology J:38206
Kcnj6wv/Kcnj6wv
(B6CBACa Aw-J/A-Kcnj6wv/J) 		abnormal substantia nigra pars compacta morphology J:6717
Kcnq2tm1.1Lvi/Kcnq2+
(129-Kcnq2tm1.1Lvi/Lvi) 		increased superior colliculus size J:298666
Kdm2btm1Nobu/Kdm2btm1Nobu
(either: (involves: 129S/SvEv * 129P2/OlaHsd) or (involves: 129P2/OlaHsd * C57BL/6J)) 		absent cerebral aqueduct J:171291
increased midbrain size J:171291
Kif2atm1Noh/Kif2atm1Noh
(involves: 129S4/SvJae * C57BL/6J) 		abnormal midbrain morphology J:107737
abnormal tegmentum morphology J:107737
abnormal trigeminal V mesencephalic nucleus morphology J:107737
L1camtm1(tTA)Msch/Y
(involves: 129 * C57BL/6J) 		abnormal cerebral aqueduct morphology J:107878
L1camtm1Mtei/Y
(involves: 129 * C57BL/6J) 		abnormal cerebral aqueduct morphology J:107878
L1camtm1Sor/Y
(involves: 129S7/SvEvBrd) 		abnormal cerebral aqueduct morphology J:47995
Laptm4btm1e.1(KOMP)Wtsi/Laptm4btm1e.1(KOMP)Wtsi
(C57BL/6N-Laptm4btm1e.1(KOMP)Wtsi/Tcp) 		abnormal midbrain morphology J:211773
Lef1tm1Rug/Lef1tm1Rug
(involves: 129S2/SvPas * C57BL/6) 		absent mesencephalic trigeminal nucleus J:18378
Lemd2Gt(DD0639)Wtsi/Lemd2Gt(DD0639)Wtsi
(B6.129P2-Lemd2Gt(DD0639)Wtsi) 		abnormal midbrain morphology J:221495
Lhx1tm1Bhr/Lhx1tm1Bhr
(involves: 129S7/SvEvBrd * C57BL/6) 		absent midbrain J:24115
Lhx1tm3.1Bhr/Lhx1tm3.1Bhr
(involves: 129S7/SvEvBrd * C57BL/6) 		absent midbrain J:63192
Lmnb1tm2Sgy/Lmnb1tm2Sgy
(involves: 129P2/OlaHsd * C57BL/6) 		decreased midbrain size J:197315
Lmx1btm1Rjo/Lmx1btm1Rjo
(involves: 129S7/SvEvBrd) 		abnormal pretectal region morphology J:117035
abnormal superior colliculus morphology J:117035
abnormal tectum morphology J:117035
decreased superior colliculus size J:117035
small tectum J:117035
Lmx1btm1Rjo/Lmx1btm1Zfc
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S7/SvEvBrd * C57BL/6 * CBA) 		small tectum J:117035
Lrp6Gt(Ex187)Byg/Lrp6Gt(Ex187)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal midbrain morphology J:64989
absent inferior colliculus J:64989
m357Asp/m357Asp
Tg(Rr291-lacZ)#Mekk/0
(involves: C57BL/6J * FVB/N) 		midbrain hyperplasia J:136795
Magee2em1(IMPC)Wtsi/Y
(C57BL/6N-Magee2em1(IMPC)Wtsi) 		increased superior colliculus size J:324106
Mfn2tm1.1Arte/Mfn2tm1.1Arte
Slc6a3tm1(cre)Lrsn/Slc6a3+
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal substantia nigra pars compacta morphology J:188337
Mid1tm1Mero/Y
(B6.Cg-Mid1tm1Mero) 		abnormal tectum morphology J:157828
decreased inferior colliculus size J:157828
Mir9-2tm1Sia/Mir9-2tm1Sia
Mir9-3tm1Sia/Mir9-3tm1Sia
(involves: C57BL/6 * CBA) 		abnormal inferior colliculus morphology J:170671
Mks1tm1a(EUCOMM)Wtsi/Mks1tm1a(EUCOMM)Wtsi
(involves: C57BL/6 * C57BL/6N) 		abnormal cerebral aqueduct morphology J:196290
Morc2atm1.1Pngr/Morc2atm1.1Pngr
Mphosph8tm1c(EUCOMM)Wtsi/Mphosph8tm1c(EUCOMM)Wtsi
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6N * SJL) 		abnormal corpora quadrigemina morphology J:332344
Morc2atm1.1Pngr/Morc2atm1.1Pngr
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal corpora quadrigemina morphology J:332344
increased midbrain size J:332344
Mphosph8tm1c(EUCOMM)Wtsi/Mphosph8tm1c(EUCOMM)Wtsi
Tg(Nes-cre)1Kln/0
(involves: C57BL/6N * SJL) 		abnormal corpora quadrigemina morphology J:332344
Mptp1C57BL/6J/Mptp1C57BL/6J
(involves: C57BL/6J * Swiss Webster) 		abnormal substantia nigra morphology J:82236
Mptp1C57BL/6J/Mptp1Swiss Webster
(involves: C57BL/6J * Swiss Webster) 		abnormal substantia nigra morphology J:82236
Mptp1Swiss Webster/Mptp1Swiss Webster
(involves: C57BL/6J * Swiss Webster) 		abnormal substantia nigra morphology J:82236
Mtorflat/Mtorflat
(involves: BTBR/J * C57BL/6J) 		abnormal midbrain morphology J:53291
Mycbp2tm1.1Adia/Mycbp2tm1.1Adia
(involves: C57BL/6 * FVB/N) 		abnormal midbrain morphology J:125702
Myh10tm4Rsad/Myh10tm4Rsad
(involves: 129S6/SvEvTac * C57BL/6) 		abnormal cerebral aqueduct morphology J:168304
Myo9atm1.2Bah/Myo9atm1.2Bah
(involves: C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:251454
Myo9atm1.2Bah/Myo9atm1.2Bah
Rhobtm1Gcp/Rhobtm1Gcp
(involves: 129/Sv * C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:251454
Naglutm1Efn/Naglutm1Efn
(either: (involves: 129S/SvEv * C57BL/6) or (involves: C57BL/6)) 		abnormal midbrain morphology J:58950
Napahyh/Napahyh
(either: C57BL/10J or (C57BL/6J x C3HeB/FeJ-a/a)F1) 		abnormal cerebral aqueduct morphology J:86347
abnormal midbrain morphology J:86347
Ndst1tm1.1Grob/Ndst1tm1.1Grob
Shhtm1Chg/Shh+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:100425
Nek1kat-2J/Nek1kat-2J
(C57BL/6J-Nek1kat-2J/J) 		abnormal cerebral aqueduct morphology J:37799
Nek1kat/Nek1kat
(involves: C3HeB/FeJLe * C57BL/6J * RBF/Dn) 		abnormal cerebral aqueduct morphology J:37799
Nf1tm1Tyj/Nf1tm1Tyj
Rasa1tm1Paw/Rasa1tm1Paw
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6) or (involves: 129S1/Sv * 129X1/SvJ * CD-1)) 		absent midbrain J:29825
Ngfrtm1Jae/Ngfrtm1Jae
(involves: 129S4/SvJae) 		abnormal superior colliculus morphology J:145459
Ngfrtm1Jae/Ngfrtm1Jae
(involves: 129S1/Sv * 129S4/SvJae) 		abnormal superior colliculus morphology J:145459
NodalTgR(MPSVNeo)413.dRob/Nodaltm4Rob
(involves: 129S/SvEv * C57BL/6) 		absent midbrain J:84300
Npas3tm1Ewb/Npas3tm1Ewb
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		enlarged cerebral aqueduct J:101561
Nr1h2tm1.1Gstr/Nr1h2tm1.1Gstr
Nr1h3tm1.1Gstr/Nr1h3tm1.1Gstr
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal cerebral aqueduct morphology J:81790
abnormal substantia nigra pars reticulata morphology J:81790
Nr4a2tm1Omc/Nr4a2tm1Omc
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal substantia nigra morphology J:46856
abnormal tegmentum morphology J:46856
Ntf3tm1Jae/Ntf3tm1Jae
(involves: 129S4/SvJae * BALB/c) 		small mesencephalic trigeminal nucleus J:23882
Ntf3tm1Lfr/Ntf3tm1Lfr
(involves: 129S2/SvPas) 		small mesencephalic trigeminal nucleus J:18984
oh/oh
(Not Specified) 		cerebral aqueductal stenosis J:5300
Opn4tm1.1(cre)Saha/Opn4+
Pou4f2tm4(DTA)Whk/Pou4f2+
Tg(CAG-Bgeo/ALPP)1Lbe/0
(involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal olivary pretectal nucleus morphology J:174940
Opn4tm1.1(cre)Saha/Opn4tm1Yau
Pou4f2tm4(DTA)Whk/Pou4f2+
(involves: 129S/SvEv * C57BL/6) 		abnormal olivary pretectal nucleus morphology J:174940
Otx1tm1Asim/Otx1tm1Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:35640
increased inferior colliculus size J:35640
increased superior colliculus size J:35640
Otx1tm1Asim/Otx1tm2(otd)Asim
Otx2tm1Pas/Otx2+
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:47899
Otx1tm1Sia/Otx1+
Otx2tm1Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal inferior colliculus morphology J:73592
abnormal midbrain morphology J:51989, J:73592
abnormal oculomotor nucleus morphology J:73592
abnormal pretectal region morphology J:51989
abnormal red nucleus morphology J:73592
abnormal superior colliculus morphology J:73592
abnormal tegmentum morphology J:73592
abnormal trigeminal V mesencephalic nucleus morphology J:73592
decreased midbrain size J:73592
decreased substantia nigra size J:73592
enlarged cerebral aqueduct J:73592
Otx1tm1Sia/Otx1+
Otx2tm2(Otx1)Sia/Otx2+
(involves: C57BL/6 * CBA) 		decreased midbrain size J:51989
Otx1tm1Sia/Otx1tm1Sia
(involves: C57BL/6 * CBA) 		abnormal trigeminal V mesencephalic nucleus morphology J:73592
Otx1tm1Sia/Otx1tm1Sia
Otx2tm5Sia/Otx2tm5Sia
(involves: C57BL/6NCrlj * CBA/JNCrlj) 		absent midbrain J:91011
Otx1tm1Sia/Otx1tm1Sia
Otx2tm8.2Sia/Otx2tm8.2Sia
(involves: C57BL/6 * CBA) 		absent midbrain J:166617
absent tectum J:166617
absent tegmentum J:166617
Otx1tm2(otd)Asim/Otx1tm2(otd)Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:47899
decreased inferior colliculus size J:47899
decreased superior colliculus size J:47899
Otx1tm2(otd)Asim/Otx1tm2(otd)Asim
Otx2tm1Pas/Otx2+
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:47899
Otx1tm3(OTX2)Asim/Otx1tm3(OTX2)Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		decreased midbrain size J:52989
Otx1tm4(cre)Asim/Otx1+
Otx2tm6Asim/Otx2tm6.1Asim
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * DBA/2) 		abnormal tegmentum morphology J:83110
small tectum J:83110
Otx2tm1.1Tlam/Otx2tm2(cre/ERT2)Tlam
(129/Sv) 		abnormal inferior colliculus morphology J:116888
abnormal midbrain morphology J:116888
decreased inferior colliculus size J:116888
Otx2tm1Pas/Otx2tm1Pas
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		absent midbrain J:29276
Otx2tm1Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal inferior colliculus morphology J:29682
abnormal trigeminal V mesencephalic nucleus morphology J:29682
absent midbrain J:29682
Otx2tm1Sia/Otx2tm1Sia
(involves: C57BL/6 * CBA) 		absent midbrain J:29682
Otx2tm1Sia/Otx2tm4Sia
(involves: C57BL/6 * CBA) 		abnormal midbrain morphology J:74631
Otx2tm1Sia/Otx2tm5Sia
(involves: C57BL/6NCrlj * CBA/JNCrlj) 		absent midbrain J:91011
Otx2tm1Sla/Otx2tm1Sla
(involves: 129S1/Sv * 129X1/SvJ * CD-1) 		absent midbrain J:30828
Otx2tm1Sla/Otx2tm2Sla
(involves: 129S1/Sv * 129X1/SvJ * CD-1) 		absent midbrain J:46641
Otx2tm2.1Imat/Otx2tm7Sia
(involves: C57BL/6NCrlj * CBA/JNCrlj) 		absent midbrain J:91012
Otx2tm2Asim/Otx2tm2Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		decreased midbrain size J:71034
Otx2tm3(Emx2)Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal pretectal region morphology J:70745
Otx2tm3Tlam/Otx2tm3Tlam
(129/Sv-Otx2tm3Tlam) 		abnormal midbrain morphology J:130649
Otx2tm12.1Asim/Otx2tm11Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		midbrain hypoplasia J:207121
Pak1ip1mray/Pak1ip1mray
(involves: C57BL/6J * FVB/NJ) 		increased midbrain size J:204457
Park7tm1Dsp/Park7tm1Dsp
(B6.129P2-Park7tm1Dsp) 		abnormal substantia nigra pars compacta morphology J:190315
Pax21Neu/Pax21Neu
(involves: 102 * C3H) 		abnormal corpora quadrigemina morphology J:37055
abnormal midbrain morphology J:37055
Pax2tm1Mbu/Pax2tm1Mbu
(C3.129P2-Pax2tm1Mbu) 		abnormal midbrain morphology J:63683
absent tectum J:63683
Pax3tm1Mrc/Pax3+
Tg(CMV-cre)1Cgn/?
(involves: 129S1/Sv * 129X1/SvJ * BALB/cJ * C57BL/6) 		midbrain hyperplasia J:93443
Pax5tm1Mbu/Pax5tm1Mbu
(involves: 129S2/SvPas * C57BL/6) 		decreased inferior colliculus size J:113076
Pax6Sey/Pax6Sey
(Not Specified) 		abnormal pretectal region morphology J:98539
Pcdhatm3Tyag/Pcdhatm3Tyag
(B6.Cg-Pcdhatm3Tyag) 		abnormal substantia nigra morphology J:151979
Pdss2tm1.1Jdhu/Pdss2tm1.2Jdhu
Tg(Pax2-cre)1Akg/0
(involves: 129 * C57BL/6N * FVB/N) 		decreased midbrain size J:179845
midbrain hypoplasia J:179845
Pdzd8tm1b(EUCOMM)Wtsi/Pdzd8tm1b(EUCOMM)Wtsi
(C57BL/6N-Pdzd8tm1b(EUCOMM)Wtsi) 		decreased superior colliculus size J:317428
Pelotm1Slac/Pelotm1Slac
En1tm2(cre)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		decreased inferior colliculus size J:306384
decreased superior colliculus size J:306384
Phox2btm1Rth/Phox2b+
Hprt1tm1(CAG-cre)Mnn/?
(involves: 129 * 129S1/Sv * C57BL/6) 		abnormal trigeminal V mesencephalic nucleus morphology J:331513
Pignm1Nisw/Pignm1Nisw
(involves: 129S1/SvImJ * C3H/HeJ * C57BL/6J) 		midbrain hypoplasia J:187360
PikfyveGt(AT0926)Wtsi/PikfyveGt(AT0926)Wtsi
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal midbrain morphology J:190368
Pitx3ak/Pitx3ak
(either: (involves: 129/Sv * C57BLKS) or (involves: 129/Sv * C57BL/6)) 		abnormal midbrain morphology J:82907, J:82746
decreased substantia nigra size J:82746
Pitx3ak/Pitx3ak
(involves: 129S1/Sv * C57BL/6 * C57BLKS/J) 		abnormal substantia nigra pars compacta morphology J:109319
Pla2g6tm1.1Hlw/Pla2g6tm1.1Hlw
(involves: 129 * C57BL/6J) 		abnormal substantia nigra pars compacta morphology J:317126
Pomgnt1tm1.1Cfg/Pomgnt1tm1.1Cfg
(involves: C57BL/6) 		abnormal inferior colliculus morphology J:258757
abnormal superior colliculus morphology J:258757
Pou4f1tm1Nat/Pou4f1tm1Nat
(involves: 129S7/SvEvBrd * C57BL/6J) 		abnormal red nucleus morphology J:35877
Pou4f1tm1Rsd/Pou4f1tm1Rsd
(involves: 129S4/SvJae) 		absent red nucleus J:37118
Pou4f2tm1Nat/Pou4f2tm2.1Nat
Tg(Pax6-cre,GFP)2Pgr/?
(involves: 129S7/SvEvBrd) 		abnormal superior colliculus morphology J:147350
Pou4f2tm1Rsd/Pou4f2tm1Rsd
(involves: 129S4/SvJae) 		abnormal superior colliculus morphology J:33502
Ppargc1atm1Dpk/Ppargc1atm1Dpk
(B6.129X1-Ppargc1atm1Dpk/J) 		abnormal substantia nigra morphology J:298664
Prkntm1Roo/Prkntm1Roo
(involves: 129S2/SvPas) 		decreased substantia nigra size J:125148
Prkntm1Ykt/Prkntm1Ykt
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal substantia nigra pars compacta morphology J:117737
Psphtm1a(EUCOMM)Hmgu/Psphtm1a(EUCOMM)Hmgu
(C57BL/6N-Psphtm1a(EUCOMM)Hmgu/Wtsi) 		abnormal midbrain morphology J:239583
Ptentm1Hwu/Ptentm1Hwu
Slc6a3tm1.1(cre)Bkmn/Slc6a3+
(involves: 129S4/SvJae * C57BL/6) 		abnormal midbrain morphology J:153622
abnormal substantia nigra pars compacta morphology J:153622
abnormal substantia nigra pars reticulata morphology J:153622
Pygo2tm1b(EUCOMM)Wtsi/Pygo2tm1b(EUCOMM)Wtsi
(C57BL/6N-Pygo2tm1b(EUCOMM)Wtsi/Tcp) 		abnormal midbrain morphology J:211773
Ranbp1tm1b(KOMP)Wtsi/Ranbp1tm1b(KOMP)Wtsi
(C57BL/6N-Ranbp1tm1b(KOMP)Wtsi/Tcp) 		abnormal midbrain morphology J:211773
Raxtm1Mjam/Raxtm1Mjam
(Not Specified) 		decreased midbrain size J:40830
Rfx4Tg(Myh6-CYP2J2)Tr5Dcz/Rfx4+
(involves: C57BL/6NTac) 		cerebral aqueductal stenosis J:84751
Rhoatm1Yuyo/Rhoatm1Yuyo
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: C57BL/6J * CBA/J) 		abnormal midbrain morphology J:172044
increased midbrain size J:172044
Rnd3Gt(IST12405G10)Tigm/Rnd3Gt(IST12405G10)Tigm
(involves: C57BL/6N) 		abnormal cerebral aqueduct morphology J:197325
cerebral aqueductal stenosis J:197325
Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1ltm1a(EUCOMM)Wtsi
(C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi) 		abnormal midbrain morphology J:239583
Scribtm1b(NCOM)Mfgc/Scribtm1b(NCOM)Mfgc
(C57BL/6N-Scribtm1a(NCOM)Mfgc/Tcp) 		abnormal midbrain morphology J:211773
Shhtm1Chg/Shhtm1Chg
(involves: 129S1/Sv * 129X1/SvJ) 		decreased midbrain size J:35802
Shhtm2Chg/Shh+
Edil3Tg(Sox2-cre)1Amc/Edil3+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA) 		increased midbrain size J:125109
Six3tm1Gco/Six3tm1Gco
(involves: 129S1/Sv) 		increased midbrain size J:81797
Slc6a3tm2(tTA)Xz/Slc6a3+
Tg(tetO-COX8A/PstI*)1Ctm/0
(involves: 129X1/SvJ * C57BL/6 * C57BL/6J * SJL) 		abnormal substantia nigra morphology J:178139
Smad1tm1Rjle/Smad1+
(involves: 129S6/SvEvTac * NIH Black Swiss) 		abnormal midbrain morphology J:99098
Smad2tm1Rob/Smad2tm2Rob
Edil3Tg(Sox2-cre)1Amc/Edil3+
(involves: 129S/SvEv * C57BL/6 * CBA * CD-1) 		absent midbrain J:84300
Smad9tm1Mwst/Smad9tm1Mwst
(involves: 129S6/SvEvTac * NIH Black Swiss) 		abnormal midbrain morphology J:99098
Smarcb1em1Koke/Smarcb1em1Koke
(C57BL/6-Smarcb1em1Koke) 		cerebral aqueductal stenosis J:337790
Smg9em1(IMPC)J/Smg9em1(IMPC)J
(involves: C57BL/6NJ) 		decreased midbrain size J:231968
Smpd1tm1Esc/Smpd1tm1Esc
(involves: 129S1/Sv * C57BL/6J) 		midbrain atrophy J:26732
Snx3tm1.1(KOMP)Vlcg/Snx3tm1.1(KOMP)Vlcg
(C57BL/6N-Snx3tm1.1(KOMP)Vlcg/J) 		abnormal midbrain morphology J:211773
Sod2tm1Cje/Sod2+
Tg(SOD1*G93A)1Gur/0
(involves: C57BL/6 * CD-1 * SJL) 		decreased substantia nigra size J:62381
Sod2tm1Cje/Sod2tm1Cje
(involves: C57BL/6J * DBA/2J) 		abnormal trigeminal V mesencephalic nucleus morphology J:98007
Sos1tm1Dlb/Sos1tm1Dlb
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal midbrain morphology J:38321
Sos1tm1Dlb/Sos1tm1Dlb
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal midbrain morphology J:38321
Spp1tm1Blh/Spp1tm1Blh
(B6.129S6-Spp1tm1Blh) 		abnormal substantia nigra morphology J:118432
Sptan1Gt(RRQ171)Byg/Sptan1Gt(RRQ171)Byg
(B6.129P2-Sptan1Gt(RRQ171)Byg) 		cerebral aqueductal stenosis J:186305
Ssbp3Gt(XB276)Byg/Ssbp3Gt(XB276)Byg
(involves: 129P2/OlaHsd) 		absent midbrain J:111801
decreased midbrain size J:111801
st/st
(Not Specified) 		abnormal midbrain roof plate morphology J:15089
StrbpGt(pGT1.8geo)8Pgr/StrbpGt(pGT1.8geo)8Pgr
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal superior colliculus morphology J:69466
Suz12tm1Xmir/Suz12+
(Not Specified) 		enlarged tectum J:150128
increased inferior colliculus size J:150128
increased superior colliculus size J:150128
Tal2tm1Thr/Tal2tm1Thr
(involves: 129 * C57BL/6) 		abnormal inferior colliculus morphology J:65762
abnormal superior colliculus morphology J:65762
abnormal tectum morphology J:65762
decreased superior colliculus size J:65762
Tenm2tm1Cal/Tenm2tm1Cal
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal superior colliculus morphology J:199791
Tfap2dtm1Mos/Tfap2dtm1Mos
(Not Specified) 		absent inferior colliculus J:177585
Tg(Camk2a-tTA)1Mmay/0
Tg(tetO-SNCA)0Olri/0
(involves: C57BL/6) 		abnormal substantia nigra morphology J:132774
abnormal substantia nigra pars reticulata morphology J:132774
Tg(CMV-ATXN3*135Q)CPama/0
(C57BL/6-Tg(CMV-ATXN3*135Q)CPama) 		abnormal substantia nigra morphology J:222991
Tg(Gfap-TGFB1)64Lms/Tg(Gfap-TGFB1)64Lms
(involves: BALB/c * SJL) 		enlarged cerebral aqueduct J:27781
Tg(GFAP-tTA)6Hyms/0
Tg(tetO-HMOX1)6Hyms/0
(involves: FVB/N) 		abnormal substantia nigra morphology J:186620
Tg(PDGFB-LRRK2*G2019S)32Hlw/?
(FVB/N-Tg(PDGFB-LRRK2*G2019S)32Hlw) 		abnormal substantia nigra pars compacta morphology J:204793
Tg(Prnp-TARDBP)3cPtrc/Tg(Prnp-TARDBP)3cPtrc
(C57BL/6-Tg(Prnp-TARDBP)3cPtrc) 		abnormal red nucleus morphology J:163231
Tg(Slc6a3-PARK2*Q311X)AXwy/0
(FVB/NJ-Tg(Slc6a3-PARK2*Q311X)AXwy) 		abnormal substantia nigra morphology J:146833
Tg(Sod1*G86R)M1Jwg/0
(involves: FVB/N) 		abnormal oculomotor nucleus morphology J:58733
Tg(SOD1*G93A)1Gur/0
(B6SJL-Tg(SOD1*G93A)1Gur/J) 		abnormal midbrain morphology J:110437
abnormal oculomotor nucleus morphology J:110437
abnormal red nucleus morphology J:110437
abnormal substantia nigra morphology J:110437
abnormal superior colliculus morphology J:110437
abnormal tegmentum morphology J:110437
Tg(SOD1*G93A)1Gur/0
(involves: C57BL/6 * CD-1 * SJL) 		decreased substantia nigra size J:62381
Tg(Tek-tTA)1Rwng/0
Tg(tetO-Notch4*)1Rwng/0
(involves: FVB/N) 		abnormal midbrain morphology J:139943
Tg(THY1-SNCA*A53T)M53Sud/0
(B6.Cg-Tg(THY1-SNCA*A53T)M53Sud/J) 		abnormal midbrain morphology J:212732
abnormal red nucleus morphology J:212732
abnormal substantia nigra pars compacta morphology J:212732
Tg(UAS-Shh)1Rth/0
Tg(Wnt1-GAL4)1Rth/0
(involves: C57BL/6J * CBA/J) 		abnormal midbrain morphology J:57948
midbrain hyperplasia J:57948
Tgfbr2tm1Karl/Tgfbr2tm1Karl
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA) 		abnormal midbrain morphology J:96359
Tmem67tm1Dgen/Tmem67tm1Dgen
(B6.129P2-Tmem67tm1Dgen) 		abnormal tegmentum morphology J:193837
Tor1atm1Wtd/Tor1atm3.1Wtd
Tg(Nes-cre)1Kln/0
(involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J * SJL) 		abnormal red nucleus morphology J:213785
Tor1atm2Wtd/Tor1atm3.1Wtd
Tg(Nes-cre)1Kln/0
(involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J * SJL) 		absent red nucleus J:213785
Trappc9tm1a(EUCOMM)Wtsi/Trappc9tm1a(EUCOMM)Wtsi
(involves: C57BL/6N) 		decreased substantia nigra size J:294716
Tubb2bbrdp/Tubb2bbrdp
(involves: A/J * FVB) 		decreased midbrain size J:201099
Tulp3tm1Jng/Tulp3+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal midbrain morphology J:70060
Tulp3tm1Jng/Tulp3tm1Jng
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal midbrain morphology J:70060
Uchl5Gt(OST447189)Lex/Uchl5Gt(OST447189)Lex
(involves: 129S5/SvEvBrd * C57BL/6J) 		abnormal cerebral aqueduct morphology J:166694
abnormal midbrain morphology J:166694
Ufm1tm1.1Kmts/Ufm1tm1.1Kmts
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * C57BL/6N * SJL) 		decreased midbrain size J:240522
Ulk4tm1a(KOMP)Wtsi/Ulk4tm1a(KOMP)Wtsi
(involves: C57BL/6N) 		cerebral aqueductal stenosis J:234631
Unc5crcm/Unc5crcm
(B6C3Fe a/a-Unc5crcm/J) 		abnormal inferior colliculus morphology J:40243
Unc5crcm/Unc5crcm
(C57BL/6J-Unc5crcm) 		increased inferior colliculus size J:46670
Unc5crcmTg(Tert)5Hwl/Unc5crcmTg(Tert)5Hwl
(involves: FVB/N) 		abnormal corpora quadrigemina morphology J:85446
Unc5crcmTg(Ucp)1.23Kz/Unc5crcmTg(Ucp)1.23Kz
(involves: C57BL/6J * SJL/J) 		abnormal inferior colliculus morphology J:40243
Upf2tm1Btp/Upf2tm1Btp
En1tm2(cre)Wrst/En1+
(involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:306384
decreased superior colliculus size J:306384
Usp14ax-J/Usp14ax-J
(involves: STOCK Mafbkr) 		decreased midbrain size J:12283
Vac14Gt(RRP155)Byg/Vac14Gt(RRP155)Byg
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal midbrain morphology J:127106
abnormal superior colliculus morphology J:127106
Vangl2Lp/Vangl2Lp
(involves: A) 		abnormal midbrain morphology J:5544, J:133114
Vps35tm1.1Hlw/Vps35+
(involves: 129S/SvEv * C57BL/6J) 		abnormal substantia nigra pars compacta morphology J:329507
Wasltm1.1Ttha/Wasltm1.1Ttha
Tg(Nes-cre)1Kag/0
(involves: C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:207484
cerebral aqueductal stenosis J:207484
Wlstm1.1Lan/Wlstm1.1Lan
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S/SvEv * C57BL/6J * CBA/J * SJL) 		absent midbrain J:164701
Wlstm1.1Whsu/Wlstm1.1Whsu
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S6/SvEvTac * C57BL/6J * CBA/J) 		absent tectum J:167835
absent tegmentum J:167835
Wnt1sw/Wnt1sw
(Not Specified) 		abnormal inferior colliculus morphology J:30722
Wnt1tm1.1Mze/Wnt1tm1.1Mze
En1tm2(cre)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6N) 		abnormal midbrain morphology J:194842
decreased midbrain size J:194842
Wnt1tm1.1Mze/Wnt1tm1.1Mze
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
En1tm2(cre)Wrst/En1+
(involves: 129 * C57BL/6N) 		abnormal midbrain morphology J:194842
Wnt1tm1.1Mze/Wnt1tm1.1Mze
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Shhtm1(EGFP/cre)Cjt/Shh+
(involves: 129S6/SvEvTac * C57BL/6N) 		abnormal midbrain morphology J:194842
Wnt1tm1.1Mze/Wnt1tm1.1Mze
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Tg(Wnt1-cre/ERT)1Alj/0
(involves: 129S6/SvEvTac * C57BL/6N * Swiss Webster) 		abnormal midbrain morphology J:194842
Wnt1tm1Amc/Wnt1tm1Amc
(involves: 129S1/Sv * C57BL/6J) 		absent midbrain J:118582
Wnt1tm1Brd/Wnt1tm1Brd
(involves: 129S7/SvEvBrd * C57BL/6J) 		absent midbrain J:10730
Wnt1tm1Mrc/Wnt1tm1Mrc
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:67737
Zic3tm1Bca/Y
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:75951
Zic3tm1Bca/Zic3+
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:75951
Zic3tm1Bca/Zic3tm1Bca
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:75951
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04/23/2024
MGI 6.23 		The Jackson Laboratory