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Mapping Data
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
  • Reference
    J:78475 Mouse Genome Informatics Scientific Curators, Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database. 2002;
  • ID
GeneAlleleAssay TypeDescription
Map2k7 assembly
Cd209f assembly
Camsap3 assembly
Lrrc8e assembly
Evi5l assembly
Pex11g assembly
Saxo5 assembly
4932443L11Rik assembly
Shcbp1 assembly
Cers4 assembly
4921522P10Rik assembly
D530014G21Rik assembly
Mcf2l assembly
Grk1 assembly
Atp11a assembly
Naxd assembly
1700029H14Rik assembly
Proz assembly
Kbtbd11 assembly
Abhd13 assembly
Cdc16 assembly
Cars2 assembly
4931415C17Rik assembly
2900027M19Rik assembly
1700128E19Rik assembly
3930402G23Rik assembly
4930453L07Rik assembly
Kbtbd11 assembly
Upf3a assembly
Tex29 assembly
5830468F06Rik assembly
Spaca7b assembly
Spaca7 assembly
Csmd1 assembly
Adam18 assembly
Chrna6 assembly
Kcnu1 assembly
Ubxn8 assembly
Slc25a15 assembly
Dctn6 assembly
Ash2l assembly
Plpbp assembly
Mrps31 assembly
Dusp26 assembly
Lsm1 assembly
Bag4 assembly
Poteg assembly
Saraf assembly
Ccdc70 assembly
Gtf2e2 assembly
Leprotl1 assembly
Agpat5 assembly
Tm2d2 assembly
Vps36 assembly
Chrnb3 assembly
Gins4 assembly
Mcph1 assembly
4930518F22Rik assembly
Plpbp assembly
Plpp5 assembly
Ddhd2 assembly
Nkx6-3 assembly
Pomk assembly
Rab11fip1 assembly
Got1l1 assembly
Rnf170 assembly
Adgra2 assembly
1700104B16Rik assembly
Thsd1 assembly
Defb7 assembly
Eri1 assembly
Cldn23 assembly
9530004P13Rik assembly
Fgf20 assembly
Mtmr7 assembly
Vps37a assembly
Micu3 assembly
Tusc3 assembly
Adam20 assembly
Adam26a assembly
Acsl1 assembly
Tenm3 assembly
Cfap97 assembly
Lrp2bp assembly
Ing2 assembly
Cenpu assembly
Cldn22 assembly
4930448N21Rik assembly
Tlr3 assembly
Irf2 assembly
Spata4 assembly
Wdr17 assembly
4930555F03Rik assembly
Asb5 assembly
Gpm6a assembly
Hpgd assembly
Galnt7 assembly
Fbxo8 assembly
Mfap3l assembly
Hpf1 assembly
Tma16 assembly
Palld assembly
Tmem192 assembly
Tktl2 assembly
Eps15l1 assembly
Ell assembly
Rfxank assembly
Crlf1 assembly
Fkbp8 assembly
Klf2 assembly
Gdf15 assembly
Homer3 assembly
Pgls assembly
Rex1bd assembly
Dda1 assembly
Pgpep1 assembly
Ndufa13 assembly
Babam1 assembly
Ccdc124 assembly
Gtpbp3 assembly
Sugp1 assembly
Arrdc2 assembly
Ints10 assembly
Psd3 assembly
Abhd8 assembly
Cyp4f18 assembly
Sh2d4a assembly
Borcs8 assembly
Calr3 assembly
Unc13a assembly
Mvb12a assembly
Mau2 assembly
Haus8 assembly
Use1 assembly
Ssbp4 assembly
Ocel1 assembly
Tssk6 assembly
Slc5a5 assembly
B3gnt3 assembly
Ednra assembly
Sin3b assembly
Isx assembly
Iqcm assembly
Arhgap10 assembly
Hhip assembly
Il27ra assembly
Farsa assembly
Ndufb7 assembly
Mgat4d assembly
1700011L22Rik assembly
Yju2b assembly
Wdr83 assembly
Mri1 assembly
Fbxw9 assembly
Anapc10 assembly
Tecr assembly
Rnaseh2a assembly
Misp3 assembly
Usp38 assembly
Tbc1d9 assembly
4930431L18Rik assembly
Palm3 assembly
Brme1 assembly
Trir assembly
Slc10a7 assembly
Gipc1 assembly
Orc6 assembly
Dnajb1 assembly
Brd7 assembly
Zfp423 assembly
Snx20 assembly
Itfg1 assembly
Neto2 assembly
Cnep1r1 assembly
9430002A10Rik assembly
Dnaja2 assembly
Nkd1 assembly
Cfap20 assembly
Arl2bp assembly
Rspry1 assembly
Ces5a assembly
Capns2 assembly
Prss54 assembly
Crnde assembly
Psme3ip1 assembly
1700047G07Rik assembly
Spmip8 assembly
Katnb1 assembly
4930488L21Rik assembly
Herpud1 assembly
Ces1d assembly
Dok4 assembly
Ces3a assembly
Car7 assembly
Hsf4 assembly
Fbxl8 assembly
Tmem208 assembly
Tppp3 assembly
Ciao2b assembly
Matcap1 assembly
Cmtm2b assembly
Nol3 assembly
Bean1 assembly
Tlm assembly
Nip7 assembly
Tmed6 assembly
Dus2 assembly
Cyb5b assembly
Nob1 assembly
Gfod2 assembly
4933405L10Rik assembly
Tsnaxip1 assembly
C630050I24Rik assembly
Rplp1 assembly
Pard6a assembly
Smpd3 assembly
Thap11 assembly
Bcar1 assembly
Adat1 assembly
Tmem170 assembly
Zfhx3 assembly
4922502B01Rik assembly
4922502B01Rik assembly
8430428J23Rik assembly
Mlkl assembly
Zfp821 assembly
Dhx38 assembly
Kars1 assembly
Ddx19a assembly
Zfpm1 assembly
Taf1c assembly
Cyba assembly
Cbfa2t3 assembly
Snai3 assembly
Jph3 assembly
Wfdc1 assembly
Gcsh assembly
Dnaaf1 assembly
Cmc2 assembly
Trappc2l assembly
Atp2c2 assembly
1700030J22Rik assembly
Cdyl2 assembly
Cotl1 assembly
3100003L13Rik assembly
Gins2 assembly
1700016A09Rik assembly
Meak7 assembly
Cmip assembly
Syce1l assembly
Dynlrb2 assembly
Adad2 assembly
Zc3h18 assembly
Fbxo31 assembly
1700018B08Rik assembly
Fbxo31 assembly
Pkd1l2 assembly
Crispld2 assembly
Bco1 assembly
Mbtps1 assembly
Wwox assembly
Trhr2 assembly
Usp10 assembly
2810004N23Rik assembly
Tomm20 assembly
1810008B01Rik assembly
Vps9d1 assembly
Ccsap assembly
Capn9 assembly
Map10 assembly
Ccdc7a assembly
Ccdc7b assembly
Ankrd11 assembly
Gas8 assembly
Pard3 assembly
Galnt2 assembly
Itgb1 assembly
Cul4a assembly
Rpl13 assembly
Polr2c assembly
Ctrb1 assembly
Mphosph6 assembly
Syce2 assembly
Ciapin1 assembly
Vps4a assembly
Fgl1 assembly
Adam24 assembly
Utp4 assembly
Cx3cl1 assembly
Smarca5 assembly
Hook2 assembly
Adam34 assembly
Cntnap4 assembly
Tubgcp3 assembly
Aida assembly
Zfp709 assembly
Nae1 assembly
Tmem184c assembly
Phaf1 assembly
Cbr4 assembly
Klhdc4 assembly
Ttc13 assembly
Tti2 assembly
Tmem161a assembly
Rtbdn assembly
Ces4a assembly
Gatad2a assembly
Neil3 assembly
Ndrg4 assembly
Cc2d1a assembly
Prmt7 assembly
Dkk4 assembly
Klhl36 assembly
Ces2c assembly
Spg7 assembly
Erlin2 assembly
Cpne2 assembly
Best2 assembly
Sgcz assembly
Unc5d assembly
Lrrc25 assembly
Spire2 assembly
Il17c assembly
Defa2 assembly
St3gal2 assembly
Defa9 assembly
Defa8 assembly
Defa7 assembly
Defa6 assembly
Defa4 assembly
Defa15 assembly
Defa14 assembly
Defa13 assembly
Defa12 assembly
Defa11 assembly
Defa10 assembly
Mmaa assembly
Ccl22 assembly
Acsf3 assembly
Pou4f2 assembly
Zfp869 assembly
Map3k21 assembly
BC030500 assembly
Atp13a1 assembly
Pgbd5 assembly
Rln3 assembly
Sult5a1 assembly
Phgdh assembly
Adam29 assembly
Urb2 assembly
Ddx60 assembly
Cngb1 assembly
Edc4 assembly
Ccdc102a assembly
Yjefn3 assembly
Slc38a7 assembly
Triml1 assembly
Mpv17l2 assembly
Mthfsd assembly
Dcaf15 assembly
Atmin assembly
Hapln4 assembly
Cdk10 assembly
Cmtm1 assembly
Defb14 assembly
Defb34 assembly
Defb37 assembly
Defb38 assembly
Defb40 assembly
Elmo3 assembly
Fhod1 assembly
Fut10 assembly
Hsh2d assembly
Adgrl1 assembly
Nanos3 assembly
Sipa1l2 assembly
Thap1 assembly
Tm6sf2 assembly
Kctd19 assembly
6030452D12Rik assembly
A230052G05Rik assembly
Zfp958 assembly
Ces2b assembly
Wdr83os assembly
Mtss2 assembly
C330011M18Rik assembly
Exoc3l assembly
Trim67 assembly
Defb39 assembly
Dand5 assembly
Helt assembly
Lzts1 assembly
Mast3 assembly
Mela assembly
Clec18a assembly
Tox3 assembly
Hmgb1-rs17 assembly
Rpl30-ps2 assembly
Defa21 assembly
Defa20 assembly
4932416K20Rik assembly
5031438A03Rik assembly
A230085B16Rik assembly
4732419C18Rik assembly
Defa-ps1 assembly
D14Sfk4 ePCR
D1Ertd819 ePCR
D0Nds29 ePCR
Fth-ps3 ePCR
  • Reference
    The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. The chromosomal locations were downloaded from the Ensembl database. The relative band sizes and therefor cytogenetic positions within a chromosome are estimated from a drawing of the karyotype. The total bp length of the euchromatic chromosome sequence is divided up in

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
MGI 6.13
The Jackson Laboratory