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C330011M18Rik Gene Detail
Summary
  • Symbol
    C330011M18Rik
  • Name
    RIKEN cDNA C330011M18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3045248
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:84791865-84793916 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 40.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    22
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045248
 lncRNA gene Chr8:84791865-84793916 (-)
129S1/SvImJ ENSMUSG00200025960
 lncRNA gene Chr8:79165015-79167077 (-)
A/J ENSMUSG00195020323
 lncRNA gene Chr8:79518156-79520215 (-)
AKR/J ENSMUSG00220024207
 lncRNA gene Chr8:79564443-79566504 (-)
BALB/cJ ENSMUSG00180021277
 lncRNA gene Chr8:79363574-79365635 (-)
C3H/HeJ ENSMUSG00175011270
 lncRNA gene Chr8:79449020-79451078 (-)
C57BL/6NJ ENSMUSG00215015174
 protein coding gene Chr8:79085712-79088563 (-)
C57BL/6NJ ENSMUSG00215028614
 lncRNA gene Chr8:79086872-79088924 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031290
 protein coding gene Chr8:75405308-75407358 (-)
CAST/EiJ ENSTCUG00005037916
 lncRNA gene Chr8:78973653-78975699 (-)
CBA/J ENSMUSG00210020631
 lncRNA gene Chr8:79441353-79443411 (-)
DBA/2J ENSMUSG00185040363
 lncRNA gene Chr8:85550138-85552196 (-)
FVB/NJ ENSMUSG00205040002
 lncRNA gene Chr8:78498162-78500213 (-)
FVB/NJ ENSMUSG00205021988
 protein coding gene Chr8:78497002-78500229 (-)
JF1/MsJ ENSUMUG00000039136
 lncRNA gene Chr8:87852984-87855035 (-)
LP/J ENSMUSG00230030325
 lncRNA gene Chr8:89161986-89164047 (-)
NOD/ShiLtJ ENSMUSG00190029292
 lncRNA gene Chr8:79518184-79520242 (-)
NZO/HlLtJ ENSMUSG00225040866
 lncRNA gene Chr8:92547887-92549938 (-)
NZO/HlLtJ ENSMUSG00225040108
 protein coding gene Chr8:92546727-92549954 (-)
PWK/PhJ ENSLUMG00010029455
 lncRNA gene Chr8:79199776-79201828 (-)
SPRET/EiJ ENSMSPG00010024051
 lncRNA gene Chr8:81115099-81117151 (-)
WSB/EiJ ENSIUOG00005016056
 lncRNA gene Chr8:80257927-80259987 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056753 Ensembl Gene Model | MGI Sequence Detail 2052 C57BL/6J ±  kb
transcript ENSMUST00000071067 Ensembl | MGI Sequence Detail 1849 Not Applicable  
polypeptide Q8C7V4 UniProt | EBI | MGI Sequence Detail 161 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 42
    Phenotypes 32
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
  • Latest
    J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory