Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  18
• Reference
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
• ID
  MGI:2449335

Genes

Gene	Assay Type
Dele1	assembly
Cndp2	assembly
Cystm1	assembly
Mtpap	assembly
Gypc	assembly
0710001A04Rik	assembly
Gata6os	assembly
Dctn4	assembly
1110001M07Rik	assembly
Wdr33	assembly
Ankhd1	assembly
Ecscr	assembly
Mocos	assembly
Dsc1	assembly
Rbfa	assembly
Rock1	assembly
Jcad	assembly
Ier3ip1	assembly
Matr3	assembly
Wac	assembly
Mpp7	assembly
Prrc1	assembly
Dtwd2	assembly
Slc25a46	assembly
Ndst1	assembly
Socs6	assembly
1500015A07Rik	assembly
1700001G01Rik	assembly
Prelid2	assembly
1700003O11Rik	assembly
Il17b	assembly
Ttc39c	assembly
Plac8l1	assembly
Ccdc192	assembly
Stard6	assembly
Nol4	assembly
Plac8l1	assembly
Cabyr	assembly
1700017H01Rik	assembly
1700018A14Rik	assembly
Nme5	assembly
Ccny	assembly
1700034B16Rik	assembly
1700034E13Rik	assembly
Timm21	assembly
Lyzl1	assembly
1700044K03Rik	assembly
1700061H18Rik	assembly
Spmip10	assembly
1700065O20Rik	assembly
Smim33	assembly
1700066O22Rik	assembly
Iws1	assembly
1700074L02Rik	assembly
1700086O06Rik	assembly
St8sia3os	assembly
1700095A13Rik	assembly
Loxhd1	assembly
1700120E14Rik	assembly
Pudp	assembly
1700127G19Rik	assembly
Hsbp1l1	assembly
Eif3j1	assembly
Sec11c	assembly
Arhgap26	assembly
Mzb1	assembly
Smim3	assembly
Pcdh1	assembly
2010010A06Rik	assembly
Ctnna1	assembly
Mospd4	assembly
2010110K18Rik	assembly
2010320O07Rik	assembly
2210016H18Rik	assembly
Nfatc1	assembly
Dtna	assembly
2210409D07Rik	assembly
2210409O19Rik	assembly
2210411G17Rik	assembly
2210414L08Rik	assembly
2210420H20Rik	assembly
Polr2d	assembly
Dynap	assembly
Commd10	assembly
2310007O11Rik	assembly
Slc66a2	assembly
Wdr33	assembly
Srp19	assembly
Rab27b	assembly
2310026I22Rik	assembly
Afg3l2	assembly
Paip2	assembly
Tubb6	assembly
Prrc1	assembly
Spink5	assembly
Rmc1	assembly
Epb41l4aos	assembly
Tmco6	assembly
Dcp2	assembly
Psma8	assembly
Wdr55	assembly
Rsl24d1	assembly
Hmgxb3	assembly
2600014K08Rik	assembly
Rnmt	assembly
2610005L07Rik	assembly
Seh1l	assembly
Arhgap26	assembly
Gnal	assembly
Elac1	assembly
Fam13b	assembly
Polr2d	assembly
Slc35a4	assembly
Isoc1	assembly
Usp14	assembly
Sft2d3	assembly
Csnk1a1	assembly
Sap130	assembly
Sting1	assembly
Yipf5	assembly
Fem1c	assembly
2610317O13Rik	assembly
Zmat2	assembly
Taf4b	assembly
Timm21	assembly
Dele1	assembly
Spata24	assembly
2700046A07Rik	assembly
2700062C07Rik	assembly
Dnajc18	assembly
Eif3j1	assembly
Pfdn1	assembly
Snx24	assembly
Arhgap12	assembly
Fam53c	assembly
Matr3	assembly
Wdr33	assembly
2810028B13Rik	assembly
Srfbp1	assembly
Mpp7	assembly
Chmp1b	assembly
Ska1	assembly
Ttc39c	assembly
Ark2c	assembly
Ppp2r2b	assembly
2900040J22Rik	assembly
2900046H12Rik	assembly
Kctd16	assembly
2900057B20Rik	assembly
Iigp1	assembly
Zmat2	assembly
Megf10	assembly
Ythdc2	assembly
4930445N18Rik	assembly
Slc14a1	assembly
3100003M19Rik	assembly
Rmc1	assembly
Thoc1	assembly
Lipg	assembly
Katnal2	assembly
Zeb1	assembly
3110038A09Rik	assembly
Prrc1	assembly
Ccny	assembly
Hdhd2	assembly
3222401L13Rik	assembly
Csnk1g3	assembly
Tmed7	assembly
Brd8	assembly
Ccny	assembly
Rell2	assembly
Ppargc1b	assembly
Cep192	assembly
Csnk1a1	assembly
Stard4	assembly
Lvrn	assembly
4833419F23Rik	assembly
4833419G08Rik	assembly
Myoz3	assembly
4833420D23Rik	assembly
4833422B07Rik	assembly
Stard6	assembly
Chsy3	assembly
4921517O11Rik	assembly
4921524L21Rik	assembly
Ccdc178	assembly
4921531P14Rik	assembly
Rttn	assembly
Cxxc5	assembly
4930415O11Rik	assembly
4930415P13Rik	assembly
4930426D05Rik	assembly
Kctd16	assembly
4930445N18Rik	assembly
4930448D08Rik	assembly
4930455D15Rik	assembly
4930461L14Rik	assembly
Odad2	assembly
4930465K10Rik	assembly
4930471G03Rik	assembly
4930474G06Rik	assembly
4930477J04Rik	assembly
1700066O22Rik	assembly
4930503L19Rik	assembly
Mro	assembly
4930511M06Rik	assembly
4930511P09Rik	assembly
1700066O22Rik	assembly
4930520A20Rik	assembly
4930520E11Rik	assembly
4930527G23Rik	assembly
1700066O22Rik	assembly
4930545E07Rik	assembly
4930546C10Rik	assembly
4930549G23Rik	assembly
Rnf125	assembly
4930563E18Rik	assembly
Ctdp1	assembly
Nol4	assembly
4930572J10Rik	assembly
4930578E11Rik	assembly
4930578L24Rik	assembly
Spata24	assembly
Ccdc192	assembly
4930588A03Rik	assembly
4930592I03Rik	assembly
4930594M17Rik	assembly
4931439C15Rik	assembly
Cul2	assembly
Zfp608	assembly
4933401L05Rik	assembly
Kctd1	assembly
Fam210a	assembly
4933407I08Rik	assembly
Zfp474	assembly
Cfap53	assembly
Cabyr	assembly
4933424G05Rik	assembly
Slc66a2	assembly
Ccbe1	assembly
Dym	assembly
Ankhd1	assembly
4933434P08Rik	assembly
4933435E02Rik	assembly
Mro	assembly
Katnal2	assembly
Trappc8	assembly
2010010A06Rik	assembly
Spata24	assembly
5330430C04Rik	assembly
Pik3c3	assembly
Oacyl	assembly
Prr16	assembly
Epg5	assembly
5430416G10Rik	assembly
Mpp7	assembly
Dsc3	assembly
Csnk1a1	assembly
Ammecr1l	assembly
Chst9	assembly
5530401D11Rik	assembly
Ccny	assembly
5730411F24Rik	assembly
Tcf4	assembly
Snx24	assembly
Tpgs2	assembly
Wdr36	assembly
Tpgs2	assembly
Dcp2	assembly
Slc66a2	assembly
5830431N17Rik	assembly
Kdm3b	assembly
Tmed7	assembly
5930405F01Rik	assembly
5930427J20Rik	assembly
Fbxo38	assembly
Spire1	assembly
6030446J10Rik	assembly
Tmem241	assembly
Cep76	assembly
Igip	assembly
Klhl14	assembly
Psd2	assembly
Ppp2r2b	assembly
6330411E07Rik	assembly
Marchf3	assembly
6330412A17Rik	assembly
6330525I24Rik	assembly
Cbln2	assembly
Tmx3	assembly
Jakmip2	assembly
Zfp397	assembly
Smad2	assembly
Ark2n	assembly
Ldlrad4	assembly
Wdr33	assembly
Gm4013	assembly
Elac1	assembly
Adnp2	assembly
8430422H06Rik	assembly
Rbm22	assembly
Ccdc112	assembly
Stard4	assembly
Synpo	assembly
Piezo2	assembly
Gramd2b	assembly
9030625G05Rik	assembly
9130001E16Rik	assembly
Ankhd1	assembly
Sh3rf2	assembly
9130209A04Rik	assembly
Gramd2b	assembly
Spink12	assembly
9330132A10Rik	assembly
Synpo	assembly
Slc12a2	assembly
9430011C21Rik	assembly
Gjd4	assembly
Piezo2	assembly
Dpysl3	assembly
Redrum	assembly
9430078K10Rik	assembly
Prrc1	assembly
Zfp438	assembly
Ccbe1	assembly
Spinkl	assembly
9530025H10Rik	assembly
Gnal	assembly
9630026C02Rik	assembly
9630041I06Rik	assembly
Map3k2	assembly
Rbbp8	assembly
Fchsd1	assembly
Spry4	assembly
A130068F13Rik	assembly
A230038B01Rik	assembly
A230062I15Rik	assembly
Celf4	assembly
Prelid3a	assembly
A330041D05Rik	assembly
2700046A07Rik	assembly
Atg12	assembly
A330094K24Rik	assembly
Mapk4	assembly
A430019L02Rik	assembly
Npc1	assembly
A430102J17Rik	assembly
Ankhd1	assembly
Egr1	assembly
Marchf3	assembly
Hmgxb3	assembly
Minar2	assembly
Sema6a	assembly
Tmx3	assembly
A730036E13Rik	assembly
A730094L24Rik	assembly
Pcdha11	assembly
A930001D20Rik	assembly
Fhod3	assembly
A930012L18Rik	assembly
Esco1	assembly
Stk32a	assembly
Tnfaip8	assembly
Actg-ps1	assembly
Adamts19	assembly
Wac	assembly
Taf7	assembly
Rttn	assembly
4732423E21Rik	assembly
Ap3s1	assembly
Atg12	assembly
Atp5f1a	assembly
Atp9b	assembly
A330093E20Rik	assembly
Taf4b	assembly
Sall3	assembly
Rab27b	assembly
Zbtb7c	assembly
B430105A11Rik	assembly
B430212C06Rik	assembly
Svil	assembly
Zfp438	assembly
Zfp521	assembly
Bambi	assembly
Dtwd2	assembly
Lrrtm2	assembly
Brd8	assembly
C030004G16Rik	assembly
C030005K06Rik	assembly
Kctd16	assembly
Dcc	assembly
C030040K24Rik	assembly
Neto1	assembly
C130024J02Rik	assembly
Dctn4	assembly
Celf4	assembly
Gpr151	assembly
C230075M21Rik	assembly
C330008A17Rik	assembly
Prelid2	assembly
C330018D20Rik	assembly
C330024E10Rik	assembly
Zfp516	assembly
Csnk1g3	assembly
C430014O12Rik	assembly
C530030A11Rik	assembly
Rttn	assembly
Ptgr3	assembly
C630007K24Rik	assembly
Dmxl1	assembly
C630043D15Rik	assembly
C730049O14Rik	assembly
Mapre2	assembly
Cetn1	assembly
Cxxc1	assembly
Psmg2	assembly
Colec12	assembly
Crem	assembly
Cul2	assembly
Me2	assembly
Ino80c	assembly
Trappc8	assembly
Nrep	assembly
D330004O07Rik	assembly
D330023I04Rik	assembly
Ldlrad4	assembly
Asxl3	assembly
D430007A19Rik	assembly
Cep192	assembly
Malt1	assembly
Sh3tc2	assembly
Slc4a9	assembly
D730045A05Rik	assembly
Ablim3	assembly
Jakmip2	assembly
Dctn4	assembly
Txnl4a	assembly
Reep5	assembly
Dsc1	assembly
Arap3	assembly
Ppp2r2b	assembly
Rax	assembly
Riok3	assembly
Ammecr1l	assembly
E430002N23Rik	assembly
Impact	assembly
Mib1	assembly
Eif1a	assembly
Epc1	assembly
Ercc3	assembly
Slc39a6	assembly
Fbxo15	assembly
Fem1c	assembly
Ftmt	assembly
Ark2c	assembly
Galnt1	assembly
Gfra3	assembly
Gnpda1	assembly
Grpel2	assembly
Hars1	assembly
Hars2	assembly
Hsd17b4	assembly
Ik	assembly
Il17b	assembly
Impa2	assembly
Kcnn2	assembly
Lman1	assembly
Smad7	assembly
Pias2	assembly
Napg	assembly
Nars1	assembly
Ndfip1	assembly
Ndufa2	assembly
Nedd4l	assembly
Osbpl1a	assembly
Pard6g	assembly
Pcdh12	assembly
Pcdhga12	assembly
Pcdha4	assembly
Pcdhb14	assembly
Pcdhb15	assembly
Pcdhb16	assembly
Pcdhb19	assembly
Pcdhb20	assembly
Pcdhb22	assembly
Pcdhb3	assembly
Pcdhb4	assembly
Pcdhb5	assembly
Pcdhb6	assembly
Pcdhb7	assembly
Pcdhga1	assembly
Pcdhga5	assembly
Pcdhga7	assembly
Pcdhgb2	assembly
Pcdhgc3	assembly
Pggt1b	assembly
Phax	assembly
Pkd2l2	assembly
Pmaip1	assembly
Poli	assembly
Proc	assembly
Ptpn2	assembly
Camk2a	assembly
Rit2	assembly
Sema6a	assembly
St8sia3	assembly
St8sia5	assembly
Sil1	assembly
Slc14a1	assembly
Slc14a2	assembly
Slc26a2	assembly
Sncaip	assembly
Snx2	assembly
Socs6	assembly
Spink1	assembly
Sra1	assembly
Ss18	assembly
Elp2	assembly
Riok3	assembly
Tcerg1	assembly
Rnf138	assembly
Myot	assembly
Txnl1	assembly
Ube2d2a	assembly
Zfp24	assembly
Zfp397	assembly
Zeb1	assembly
Kif5b	assembly
Usp14	assembly
Lama3	assembly
Npc1	assembly
Aqp4	assembly
Dsc2	assembly
Dsg1a	assembly
Dsg3	assembly
Mapre2	assembly
Ttr	assembly
D18Ertd232e	assembly
Dsg2	assembly
Ctnna1	assembly
Camk4	assembly
Bin1	assembly
Apc	assembly
Hbegf	assembly
Hspa9	assembly
Matr3	assembly
Camk4	assembly
Diaph1	assembly
Hdac3	assembly
Kif20a	assembly
Rnf14	assembly
Dtna	assembly
Slc23a1	assembly
Fgf1	assembly
Nr3c1	assembly
Npy6r	assembly
Trim36	assembly
Cdo1	assembly
Gykl1	assembly
Aldh7a1	assembly
Fbn2	assembly
Lmnb1	assembly
Csf1r	assembly
Rps14	assembly
Pde6a	assembly
Cd74	assembly
Adrb2	assembly
Mc2r	assembly
Fech	assembly
Mbd2	assembly
Acaa2	assembly
Dcc	assembly
Mbd1	assembly
Smad2	assembly
Smad4	assembly
Myo5b	assembly
Txnl4a	assembly
Nfatc1	assembly
Cyb5a	assembly
Mbp	assembly
Tshz1	assembly

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.