D730045A05Rik Gene Detail

Summary

• Symbol
  D730045A05Rik
• Name
  RIKEN cDNA D730045A05 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1925105
  NCBI Gene: 77855
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:74150978-74153159 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 50.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  233 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1925105	lncRNA gene	Chr18:74150978-74153159 (+)
129S1/SvImJ	ENSMUSG00200028781	lncRNA gene	Chr18:71370127-71372312 (+)
A/J	ENSMUSG00195004913	lncRNA gene	Chr18:71416705-71418912 (+)
AKR/J	ENSMUSG00220017321	lncRNA gene	Chr18:71364887-71367092 (+)
BALB/cJ	ENSMUSG00180013483	lncRNA gene	Chr18:71995426-71997631 (+)
C3H/HeJ	ENSMUSG00175012672	lncRNA gene	Chr18:71564453-71566644 (+)
C57BL/6NJ	ENSMUSG00215020978	lncRNA gene	Chr18:70913580-70915763 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005271	lincRNA gene	Chr18:70476953-70479058 (+)
CAST/EiJ	ENSTCUG00005015836	lncRNA gene	Chr18:70487236-70489413 (+)
CBA/J	ENSMUSG00210037272	lncRNA gene	Chr18:71522019-71524204 (+)
DBA/2J	ENSMUSG00185011901	lncRNA gene	Chr18:71428152-71430337 (+)
FVB/NJ	ENSMUSG00205018654	lncRNA gene	Chr18:71038138-71040343 (+)
JF1/MsJ	ENSUMUG00000036083	lncRNA gene	Chr18:71333013-71335204 (+)
LP/J	ENSMUSG00230014585	lncRNA gene	Chr18:73494312-73496497 (+)
NOD/ShiLtJ	ENSMUSG00190024329	lncRNA gene	Chr18:71162313-71164518 (+)
NZO/HlLtJ	ENSMUSG00225035123	lncRNA gene	Chr18:73343906-73346111 (+)
PWK/PhJ	ENSLUMG00010007145	lncRNA gene	Chr18:71761152-71763319 (+)
SPRET/EiJ	ENSMSPG00010009842	lncRNA gene	Chr18:71986324-71988498 (+)
WSB/EiJ	ENSIUOG00005006676	lncRNA gene	Chr18:70969498-70971699 (+)

Homology

• Gene Tree
  D730045A05Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving D730045A05Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000090263 (Evidence)
• NCBI Gene
  77855

Representative Sequences			Length	Strain/Species
genomic	77855	NCBI Gene Model | MGI Sequence Detail	2182	C57BL/6J
transcript	NR_045390	RefSeq | MGI Sequence Detail	1269	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573