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1700086O06Rik Gene Detail
Summary
  • Symbol
    1700086O06Rik
  • Name
    RIKEN cDNA 1700086O06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920766
    NCBI Gene: 73516
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:38371458-38383618 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 20.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    428 from dbSNP Build 142
  • Strain Annotations
    31
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920766
 lncRNA gene Chr18:38371428-38383690 (-)
129S1/SvImJ ENSMUSG00200041415
 protein coding gene Chr18:35368873-35381320 (-)
129S1/SvImJ ENSMUSG00200044896
 lncRNA gene Chr18:35368837-35381351 (-)
A/J ENSMUSG00195037187
 lncRNA gene Chr18:35521434-35533946 (-)
A/J ENSMUSG00195032756
 protein coding gene Chr18:35521470-35533915 (-)
AKR/J ENSMUSG00220017263
 lncRNA gene Chr18:35489478-35501991 (-)
AKR/J ENSMUSG00220016250
 protein coding gene Chr18:35489514-35501960 (-)
BALB/cJ ENSMUSG00180021707
 lncRNA gene Chr18:35971061-35983575 (-)
BALB/cJ ENSMUSG00180018269
 protein coding gene Chr18:35971097-35983544 (-)
C3H/HeJ ENSMUSG00175037448
 protein coding gene Chr18:35484016-35496201 (-)
C3H/HeJ ENSMUSG00175038949
 lncRNA gene Chr18:35483971-35496232 (-)
C57BL/6NJ ENSMUSG00215033909
 lncRNA gene Chr18:35241065-35253327 (-)
C57BL/6NJ ENSMUSG00215010675
 protein coding gene Chr18:35241107-35253296 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005257
 lincRNA gene Chr18:35429744-35441265 (-)
CAST/EiJ ENSTCUG00005024972
 lncRNA gene Chr18:35100355-35112641 (-)
CBA/J ENSMUSG00210021877
 lncRNA gene Chr18:35513084-35525598 (-)
CBA/J ENSMUSG00210020283
 protein coding gene Chr18:35513120-35525567 (-)
DBA/2J ENSMUSG00185018599
 protein coding gene Chr18:35447710-35460154 (-)
DBA/2J ENSMUSG00185020719
 lncRNA gene Chr18:35447674-35460185 (-)
FVB/NJ ENSMUSG00205033655
 lncRNA gene Chr18:35147768-35160284 (-)
FVB/NJ ENSMUSG00205015074
 protein coding gene Chr18:35147804-35160253 (-)
JF1/MsJ ENSUMUG00000050275
 lncRNA gene Chr18:35578993-35591272 (-)
LP/J ENSMUSG00230045733
 protein coding gene Chr18:37562993-37575437 (-)
LP/J ENSMUSG00230048635
 lncRNA gene Chr18:37562957-37575468 (-)
NOD/ShiLtJ ENSMUSG00190022092
 lncRNA gene Chr18:35232298-35244557 (-)
NOD/ShiLtJ ENSMUSG00190016966
 protein coding gene Chr18:35232359-35244526 (-)
NZO/HlLtJ ENSMUSG00225047580
 lncRNA gene Chr18:37469822-37482083 (-)
NZO/HlLtJ ENSMUSG00225044040
 protein coding gene Chr18:37469883-37482052 (-)
PWK/PhJ ENSLUMG00010013053
 lncRNA gene Chr18:35727775-35740046 (-)
SPRET/EiJ ENSMSPG00010022157
 lncRNA gene Chr18:35759841-35771294 (-)
WSB/EiJ ENSIUOG00005008456
 lncRNA gene Chr18:35227563-35239826 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    15
Sequences &
Gene Models
less
  • All Sequences
    94
  • RefSeq
    3
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73516 NCBI Gene Model | MGI Sequence Detail 12161 C57BL/6J ±  kb
transcript NR_015475 RefSeq | MGI Sequence Detail 1564 C57BL/6  
polypeptide Q3V3J7 UniProt | EBI | MGI Sequence Detail 71 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory