4930520E11Rik Gene Detail

Summary

• Symbol
  4930520E11Rik
• Name
  RIKEN cDNA 4930520E11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1914893
  NCBI Gene: 102634716
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr18:77148188-77152826 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914893	lncRNA gene	Chr18:77148188-77152826 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving 4930520E11Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  3

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• NCBI Gene
  102634716

Representative Sequences			Length	Strain/Species
genomic	102634716	NCBI Gene Model | MGI Sequence Detail	4639	C57BL/6J
transcript	AK015850	GenBank | ENA | DDBJ | MGI Sequence Detail	933	C57BL/6J

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 4930520E11Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr153940	Chr18:77152768-77152815 (-)	34 bp
Tssr153939	Chr18:77152734-77152765 (-)	76 bp