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Mospd4 Pseudogene Detail
Summary
  • Symbol
    Mospd4
  • Name
    motile sperm domain containing 4
  • Synonyms
    2010013H21Rik
  • Feature Type
    pseudogene
  • IDs
    MGI:1919326
    NCBI Gene: 72076
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:46598282-46598857 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 18, 24.59 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    110 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919326
pseudogene Chr18:46598001-46598883 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011443
pseudogene Chr18:45263271-45263846 (-)
A/J MGP_AJ_G0011438
pseudogene Chr18:43632441-43633016 (-)
AKR/J MGP_AKRJ_G0011402
pseudogene Chr18:44821063-44821638 (-)
BALB/cJ MGP_BALBcJ_G0011417
pseudogene Chr18:43741833-43742408 (-)
C3H/HeJ MGP_C3HHeJ_G0011305
pseudogene Chr18:44924307-44924882 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011709
pseudogene Chr18:46866972-46867547 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0010262
pseudogene Chr18:43466516-43467091 (-)
CAST/EiJ MGP_CASTEiJ_G0011110
pseudogene Chr18:44879824-44880399 (-)
CBA/J MGP_CBAJ_G0011281
pseudogene Chr18:48122073-48122648 (-)
DBA/2J MGP_DBA2J_G0011334
pseudogene Chr18:43253313-43253888 (-)
FVB/NJ MGP_FVBNJ_G0011339
pseudogene Chr18:42816706-42817281 (-)
LP/J MGP_LPJ_G0011403
pseudogene Chr18:45336904-45337479 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011332
pseudogene Chr18:49478961-49479536 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011695
pseudogene Chr18:44743698-44744273 (-)
PWK/PhJ MGP_PWKPhJ_G0010973
pseudogene Chr18:43392628-43393203 (-)
SPRET/EiJ MGP_SPRETEiJ_G0010794
pseudogene Chr18:44908230-44908805 (-)
WSB/EiJ MGP_WSBEiJ_G0011142
pseudogene Chr18:44647469-44648044 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046487 Ensembl Gene Model | MGI Sequence Detail 576 C57BL/6J ±  kb
transcript ENSMUST00000180618 Ensembl | MGI Sequence Detail 576 Not Applicable  
polypeptide Q9D8A4 UniProt | EBI | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR013783 Immunoglobulin-like fold
    IPR000535 Major sperm protein (MSP) domain
    IPR008962 PapD-like superfamily
    IPR016763 Vesicle-associated membrane-protein-associated protein
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
07/05/2024
MGI 6.24
The Jackson Laboratory