1700018A14Rik Gene Detail

Summary

• Symbol
  1700018A14Rik
• Name
  RIKEN cDNA 1700018A14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1916641
  NCBI Gene: 69391
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:46332088-46332798 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 24.43 cM, cytoband C
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916641	lncRNA gene	Chr18:46332088-46332798 (+)
129S1/SvImJ	ENSMUSG00200030840	unclassified gene	Chr18:43355338-43356048 (+)
A/J	ENSMUSG00195025119	unclassified gene	Chr18:43533816-43534526 (+)
AKR/J	ENSMUSG00220021186	unclassified gene	Chr18:43483665-43484375 (+)
BALB/cJ	ENSMUSG00180007990	unclassified gene	Chr18:44022973-44023683 (+)
C3H/HeJ	ENSMUSG00175011184	unclassified gene	Chr18:43540909-43541619 (+)
C57BL/6NJ	ENSMUSG00215009787	unclassified gene	Chr18:43217160-43217870 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000775	unclassified gene	Chr18:43211822-43212547 (+)
CAST/EiJ	ENSTCUG00005014451	unclassified gene	Chr18:42977435-42978144 (+)
CBA/J	ENSMUSG00210022520	unclassified gene	Chr18:43592739-43593449 (+)
DBA/2J	ENSMUSG00185028448	unclassified gene	Chr18:43492888-43493598 (+)
FVB/NJ	ENSMUSG00205016151	unclassified gene	Chr18:42963958-42964668 (+)
JF1/MsJ	ENSUMUG00000032087	unclassified gene	Chr18:43517332-43518043 (+)
LP/J	ENSMUSG00230029852	unclassified gene	Chr18:45566886-45567596 (+)
NOD/ShiLtJ	ENSMUSG00190029633	unclassified gene	Chr18:43268572-43269282 (+)
NZO/HlLtJ	ENSMUSG00225027819	unclassified gene	Chr18:45432583-45433293 (+)
PWK/PhJ	ENSLUMG00010022247	unclassified gene	Chr18:43621724-43622435 (+)
SPRET/EiJ	ENSMSPG00010013668	unclassified gene	Chr18:43792457-43793167 (+)
WSB/EiJ	ENSIUOG00005009476	unclassified gene	Chr18:43182159-43182868 (+)

Homology

• Gene Tree
  1700018A14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving 1700018A14Rik
• Incidental Mutations
  Mutagenetix , APF , CvDC
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1
• CCDS
  CCDS50280.1

• Ensembl
  ENSMUSG00000103616 (Evidence)
• NCBI Gene
  69391

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103616	Ensembl Gene Model | MGI Sequence Detail	711	C57BL/6J
transcript	AK006077	GenBank | ENA | DDBJ | MGI Sequence Detail	714	C57BL/6J
polypeptide	Q9DA84	UniProt | EBI | MGI Sequence Detail	111	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 13

  Phenotypes 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67