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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    18
  • Reference
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • ID
    MGI:2449335
Genes
GeneAlleleAssay TypeDescription
Dele1 assembly
Cndp2 assembly
Cystm1 assembly
Mtpap assembly
Gypc assembly
0710001A04Rik assembly
1010001N08Rik assembly
Dctn4 assembly
1110001M07Rik assembly
Wdr33 assembly
Ankhd1 assembly
Ecscr assembly
Mocos assembly
Dsc1 assembly
Rbfa assembly
Rock1 assembly
Jcad assembly
Ier3ip1 assembly
Matr3 assembly
Wac assembly
Mpp7 assembly
Prrc1 assembly
Dtwd2 assembly
Slc25a46 assembly
Ndst1 assembly
Socs6 assembly
1500015A07Rik assembly
1700001G01Rik assembly
Prelid2 assembly
1700003O11Rik assembly
Il17b assembly
Ttc39c assembly
Plac8l1 assembly
Ccdc192 assembly
Stard6 assembly
Nol4 assembly
Plac8l1 assembly
Cabyr assembly
1700017H01Rik assembly
1700018A14Rik assembly
Nme5 assembly
Ccny assembly
1700034B16Rik assembly
1700034E13Rik assembly
Timm21 assembly
Lyzl1 assembly
1700044K03Rik assembly
1700061H18Rik assembly
Tex43 assembly
1700065O20Rik assembly
1700066B19Rik assembly
1700066O22Rik assembly
Iws1 assembly
1700074L02Rik assembly
1700086O06Rik assembly
St8sia3os assembly
1700095A13Rik assembly
Loxhd1 assembly
1700120E14Rik assembly
Pudp assembly
1700127G19Rik assembly
Hsbp1l1 assembly
Eif3j1 assembly
Sec11c assembly
Arhgap26 assembly
Mzb1 assembly
Smim3 assembly
Pcdh1 assembly
2010010A06Rik assembly
Ctnna1 assembly
Mospd4 assembly
2010110K18Rik assembly
2010320O07Rik assembly
2210016H18Rik assembly
Nfatc1 assembly
Dtna assembly
2210409D07Rik assembly
2210409O19Rik assembly
2210411G17Rik assembly
2210414L08Rik assembly
2210420H20Rik assembly
Polr2d assembly
Dynap assembly
Commd10 assembly
2310007O11Rik assembly
Pqlc1 assembly
Wdr33 assembly
Srp19 assembly
Rab27b assembly
2310026I22Rik assembly
Afg3l2 assembly
Paip2 assembly
Tubb6 assembly
Prrc1 assembly
Spink5 assembly
Rmc1 assembly
Epb41l4aos assembly
Tmco6 assembly
Dcp2 assembly
Psma8 assembly
Wdr55 assembly
Rsl24d1 assembly
Hmgxb3 assembly
2600014K08Rik assembly
Rnmt assembly
2610005L07Rik assembly
Seh1l assembly
Arhgap26 assembly
Gnal assembly
Elac1 assembly
Fam13b assembly
Polr2d assembly
Slc35a4 assembly
Isoc1 assembly
Usp14 assembly
Sft2d3 assembly
Csnk1a1 assembly
Sap130 assembly
Tmem173 assembly
Yipf5 assembly
Fem1c assembly
2610317O13Rik assembly
Zmat2 assembly
Taf4b assembly
Timm21 assembly
Dele1 assembly
Spata24 assembly
2700046A07Rik assembly
2700062C07Rik assembly
Dnajc18 assembly
Eif3j1 assembly
Pfdn1 assembly
Snx24 assembly
Arhgap12 assembly
Fam53c assembly
Matr3 assembly
Wdr33 assembly
2810028B13Rik assembly
Srfbp1 assembly
Mpp7 assembly
Chmp1b assembly
Ska1 assembly
Ttc39c assembly
Rnf165 assembly
Ppp2r2b assembly
2900040J22Rik assembly
2900046H12Rik assembly
2900055J20Rik assembly
2900057B20Rik assembly
Iigp1 assembly
Zmat2 assembly
Megf10 assembly
Ythdc2 assembly
4930445N18Rik assembly
Slc14a1 assembly
3100003M19Rik assembly
Rmc1 assembly
Thoc1 assembly
Lipg assembly
Katnal2 assembly
Zeb1 assembly
3110038A09Rik assembly
Prrc1 assembly
Ccny assembly
Hdhd2 assembly
3222401L13Rik assembly
Csnk1g3 assembly
Tmed7 assembly
Brd8 assembly
Ccny assembly
Rell2 assembly
Ppargc1b assembly
Cep192 assembly
Csnk1a1 assembly
Stard4 assembly
Lvrn assembly
4833419F23Rik assembly
4833419G08Rik assembly
Myoz3 assembly
4833420D23Rik assembly
4833422B07Rik assembly
Stard6 assembly
Chsy3 assembly
4921517O11Rik assembly
4921524L21Rik assembly
Ccdc178 assembly
4921531P14Rik assembly
Rttn assembly
Cxxc5 assembly
4930415O11Rik assembly
4930415P13Rik assembly
4930426D05Rik assembly
Kctd16 assembly
4930445N18Rik assembly
4930448D08Rik assembly
4930455D15Rik assembly
4930461L14Rik assembly
Armc4 assembly
4930465K10Rik assembly
4930471G03Rik assembly
4930474G06Rik assembly
4930477J04Rik assembly
1700066O22Rik assembly
4930503L19Rik assembly
Mro assembly
4930511M06Rik assembly
4930511P09Rik assembly
1700066O22Rik assembly
4930520A20Rik assembly
4930520E11Rik assembly
4930527G23Rik assembly
1700066O22Rik assembly
4930545E07Rik assembly
4930546C10Rik assembly
4930549G23Rik assembly
Rnf125 assembly
4930563E18Rik assembly
Ctdp1 assembly
Nol4 assembly
4930572J10Rik assembly
4930578E11Rik assembly
4930578L24Rik assembly
Spata24 assembly
Ccdc192 assembly
4930588A03Rik assembly
4930592I03Rik assembly
4930594M17Rik assembly
4931439C15Rik assembly
Cul2 assembly
Zfp608 assembly
4933401L05Rik assembly
Kctd1 assembly
Fam210a assembly
4933407I08Rik assembly
Zfp474 assembly
Cfap53 assembly
Cabyr assembly
4933424G05Rik assembly
Pqlc1 assembly
Ccbe1 assembly
Dym assembly
Ankhd1 assembly
4933434P08Rik assembly
4933435E02Rik assembly
Mro assembly
Katnal2 assembly
Trappc8 assembly
2010010A06Rik assembly
Spata24 assembly
5330430C04Rik assembly
Pik3c3 assembly
Oacyl assembly
Prr16 assembly
Epg5 assembly
5430416G10Rik assembly
Mpp7 assembly
Dsc3 assembly
Csnk1a1 assembly
Ammecr1l assembly
Chst9 assembly
5530401D11Rik assembly
Ccny assembly
5730411F24Rik assembly
Tcf4 assembly
Snx24 assembly
Tpgs2 assembly
Wdr36 assembly
Tpgs2 assembly
Dcp2 assembly
Pqlc1 assembly
5830431N17Rik assembly
Kdm3b assembly
Tmed7 assembly
5930405F01Rik assembly
5930427J20Rik assembly
Fbxo38 assembly
Spire1 assembly
6030446J10Rik assembly
Tmem241 assembly
Cep76 assembly
Igip assembly
Klhl14 assembly
Psd2 assembly
Ppp2r2b assembly
6330411E07Rik assembly
March3 assembly
6330412A17Rik assembly
6330525I24Rik assembly
Cbln2 assembly
Tmx3 assembly
Jakmip2 assembly
Zfp397 assembly
Smad2 assembly
8030462N17Rik assembly
Ldlrad4 assembly
Wdr33 assembly
8430416G17Rik assembly
Elac1 assembly
Adnp2 assembly
8430422H06Rik assembly
Rbm22 assembly
Ccdc112 assembly
Stard4 assembly
Synpo assembly
Piezo2 assembly
Gramd3 assembly
9030625G05Rik assembly
9130001E16Rik assembly
Ankhd1 assembly
Sh3rf2 assembly
9130209A04Rik assembly
Gramd3 assembly
Spink12 assembly
9330132A10Rik assembly
Synpo assembly
Slc12a2 assembly
9430011C21Rik assembly
Gjd4 assembly
Piezo2 assembly
9430041P20Rik assembly
Redrum assembly
9430078K10Rik assembly
Prrc1 assembly
Zfp438 assembly
Ccbe1 assembly
Spinkl assembly
9530025H10Rik assembly
Gnal assembly
9630026C02Rik assembly
9630041I06Rik assembly
Map3k2 assembly
Rbbp8 assembly
Fchsd1 assembly
Spry4 assembly
A130068F13Rik assembly
A230038B01Rik assembly
A230062I15Rik assembly
Celf4 assembly
Prelid3a assembly
A330041D05Rik assembly
2700046A07Rik assembly
Atg12 assembly
A330094K24Rik assembly
Mapk4 assembly
A430019L02Rik assembly
Npc1 assembly
A430102J17Rik assembly
Ankhd1 assembly
Egr1 assembly
March3 assembly
Hmgxb3 assembly
Minar2 assembly
Sema6a assembly
Tmx3 assembly
A730036E13Rik assembly
A730094L24Rik assembly
Pcdha11 assembly
A930001D20Rik assembly
Fhod3 assembly
A930012L18Rik assembly
Esco1 assembly
Stk32a assembly
Tnfaip8 assembly
Actg-ps1 assembly
Adamts19 assembly
Wac assembly
Taf7 assembly
Rttn assembly
4732423E21Rik assembly
Ap3s1 assembly
Atg12 assembly
Atp5a1 assembly
Atp9b assembly
A330093E20Rik assembly
Taf4b assembly
Sall3 assembly
Rab27b assembly
Zbtb7c assembly
B430105A11Rik assembly
B430212C06Rik assembly
Svil assembly
Zfp438 assembly
Zfp521 assembly
Bambi assembly
Dtwd2 assembly
Lrrtm2 assembly
Brd8 assembly
C030004G16Rik assembly
C030005K06Rik assembly
C030017B01Rik assembly
Dcc assembly
C030040K24Rik assembly
Neto1 assembly
C130024J02Rik assembly
Dctn4 assembly
Celf4 assembly
Gpr151 assembly
C230075M21Rik assembly
C330008A17Rik assembly
Prelid2 assembly
C330018D20Rik assembly
C330024E10Rik assembly
Zfp516 assembly
Csnk1g3 assembly
C430014O12Rik assembly
C530030A11Rik assembly
Rttn assembly
Zadh2 assembly
C630007K24Rik assembly
Dmxl1 assembly
C630043D15Rik assembly
C730049O14Rik assembly
Mapre2 assembly
Cetn1 assembly
Cxxc1 assembly
Psmg2 assembly
Colec12 assembly
Crem assembly
Cul2 assembly
Me2 assembly
Ino80c assembly
Trappc8 assembly
Nrep assembly
D330004O07Rik assembly
D330023I04Rik assembly
Ldlrad4 assembly
Asxl3 assembly
D430007A19Rik assembly
Cep192 assembly
Malt1 assembly
Sh3tc2 assembly
Slc4a9 assembly
D730045A05Rik assembly
Ablim3 assembly
Jakmip2 assembly
Dctn4 assembly
Txnl4a assembly
Reep5 assembly
Dsc1 assembly
Arap3 assembly
Ppp2r2b assembly
Rax assembly
Riok3 assembly
Ammecr1l assembly
E430002N23Rik assembly
Impact assembly
Mib1 assembly
Eif1a assembly
Epc1 assembly
Ercc3 assembly
Slc39a6 assembly
Fbxo15 assembly
Fem1c assembly
Ftmt assembly
Rnf165 assembly
Galnt1 assembly
Gfra3 assembly
Gnpda1 assembly
Grpel2 assembly
Hars assembly
Hars2 assembly
Hsd17b4 assembly
Ik assembly
Il17b assembly
Impa2 assembly
Kcnn2 assembly
Lman1 assembly
Smad7 assembly
Pias2 assembly
Napg assembly
Nars assembly
Ndfip1 assembly
Ndufa2 assembly
Nedd4l assembly
Osbpl1a assembly
Pard6g assembly
Pcdh12 assembly
Pcdhga12 assembly
Pcdha4 assembly
Pcdhb14 assembly
Pcdhb15 assembly
Pcdhb16 assembly
Pcdhb19 assembly
Pcdhb20 assembly
Pcdhb22 assembly
Pcdhb3 assembly
Pcdhb4 assembly
Pcdhb5 assembly
Pcdhb6 assembly
Pcdhb7 assembly
Pcdhga1 assembly
Pcdhga5 assembly
Pcdhga7 assembly
Pcdhgb2 assembly
Pcdhgc3 assembly
Pggt1b assembly
Phax assembly
Pkd2l2 assembly
Pmaip1 assembly
Poli assembly
Proc assembly
Ptpn2 assembly
Camk2a assembly
Rit2 assembly
Sema6a assembly
St8sia3 assembly
St8sia5 assembly
Sil1 assembly
Slc14a1 assembly
Slc14a2 assembly
Slc26a2 assembly
Sncaip assembly
Snx2 assembly
Socs6 assembly
Spink1 assembly
Sra1 assembly
Ss18 assembly
Elp2 assembly
Riok3 assembly
Tcerg1 assembly
Rnf138 assembly
Myot assembly
Txnl1 assembly
Ube2d2a assembly
Zfp24 assembly
Zfp397 assembly
Zeb1 assembly
Kif5b assembly
Usp14 assembly
Lama3 assembly
Npc1 assembly
Aqp4 assembly
Dsc2 assembly
Dsg1a assembly
Dsg3 assembly
Mapre2 assembly
Ttr assembly
D18Ertd232e assembly
Dsg2 assembly
Ctnna1 assembly
Camk4 assembly
Bin1 assembly
Apc assembly
Hbegf assembly
Hspa9 assembly
Matr3 assembly
Camk4 assembly
Diaph1 assembly
Hdac3 assembly
Kif20a assembly
Rnf14 assembly
Dtna assembly
Slc23a1 assembly
Fgf1 assembly
Nr3c1 assembly
Npy6r assembly
Trim36 assembly
Cdo1 assembly
Gykl1 assembly
Aldh7a1 assembly
Fbn2 assembly
Lmnb1 assembly
Csf1r assembly
Rps14 assembly
Pde6a assembly
Cd74 assembly
Adrb2 assembly
Mc2r assembly
Fech assembly
Mbd2 assembly
Acaa2 assembly
Dcc assembly
Mbd1 assembly
Smad2 assembly
Smad4 assembly
Myo5b assembly
Txnl4a assembly
Nfatc1 assembly
Cyb5a assembly
Mbp assembly
Tshz1 assembly
Notes
  • Reference
    The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory