Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  6
• Reference
  J:78475 Mouse Genome Informatics Scientific Curators, Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database. 2002;
• ID
  MGI:2385480

Genes

Gene	Assay Type
Nxph1	assembly
Gngt1	assembly
Asns	assembly
Slc25a13	assembly
Gng11	assembly
Rpa3	assembly
Vps50	assembly
Ppp1r9a	assembly
Vps50	assembly
C1galt1	assembly
Glcci1	assembly
Coxfa4	assembly
Wnt2	assembly
Tmem168	assembly
Ankrd7	assembly
Phf14	assembly
Tmem106b	assembly
St7	assembly
Foxp2	assembly
Ppp1r3a	assembly
Grm8	assembly
Fscn3	assembly
Cpa1	assembly
Atp6v1f	assembly
Tnpo3	assembly
Ndufa5	assembly
Lingo1	assembly
Rnf148	assembly
Ing3	assembly
Wasl	assembly
Fezf1	assembly
1700080G18Rik	assembly
Gcc1	assembly
Hyal6	assembly
Hyal5	assembly
Ssmem1	assembly
6530409C15Rik	assembly
Klhdc10	assembly
Hyal4	assembly
Lmod2	assembly
Wnt16	assembly
Impdh1	assembly
Rab19	assembly
Trim24	assembly
Cnot4	assembly
Fmc1	assembly
Nup205	assembly
Chchd3	assembly
1700111E14Rik	assembly
1200014N16Rik	assembly
Lrguk	assembly
8030453O22Rik	assembly
Tmem213	assembly
Slc35b4	assembly
Atp6v0a4	assembly
Mtpn	assembly
Pip	assembly
Sva	assembly
Or2a7	assembly
Or2a57	assembly
Clec5a	assembly
Tpk1	assembly
Try4	assembly
Cntnap2	assembly
Prss37	assembly
Sval1	assembly
Ssbp1	assembly
1810009J06Rik	assembly
5830405F06Rik	assembly
Fam131b	assembly
Llcfc1	assembly
Tcaf1	assembly
Trpv6	assembly
Sval2	assembly
Prss1	assembly
Inmt	assembly
Hnrnpa2b1	assembly
Adcyap1r1	assembly
Cul1	assembly
Mturn	assembly
Npy	assembly
Scrn1	assembly
Chn2	assembly
Zfp398	assembly
Spmip4	assembly
Cpvl	assembly
9130019P16Rik	assembly
Osbpl3	assembly
Snx10	assembly
9030405F24Rik	assembly
Malsu1	assembly
Atp6v0e2	assembly
Prr15	assembly
Npvf	assembly
Ppp1r17	assembly
Tacstd2	assembly
Lsm5	assembly
4930544G11Rik	assembly
Prdm5	assembly
Mmrn1	assembly
Lancl2	assembly
Herc6	assembly
Nap1l5	assembly
Avl9	assembly
Vmn1r10	assembly
Vmn1r11	assembly
Vmn1r13	assembly
Vmn1r15	assembly
Vmn1r14	assembly
Vmn1r30	assembly
Capg	assembly
St3gal5	assembly
Mrpl35	assembly
Jkampl	assembly
Chmp3	assembly
Retsat	assembly
0610030E20Rik	assembly
6330415B21Rik	assembly
Sh2d6	assembly
Spmip9	assembly
Kcmf1	assembly
Immt	assembly
Suclg1	assembly
Ggcx	assembly
Vamp5	assembly
Cct7	assembly
Nagk	assembly
Pole4	assembly
Nat8	assembly
Mrpl53	assembly
Nat8f5	assembly
Dqx1	assembly
Ino80b	assembly
Pradc1	assembly
Ankrd53	assembly
Wdr54	assembly
Exoc6b	assembly
5430434F05Rik	assembly
Mogs	assembly
Nat8f2	assembly
Sfxn5	assembly
Tacr1	assembly
Tia1	assembly
Vmn1r51	assembly
Vmn1r45	assembly
Bmp10	assembly
Tpra1	assembly
Nfu1	assembly
Chchd6	assembly
Gkn1	assembly
Gkn2	assembly
Lsm3	assembly
Gkn3	assembly
Rab43	assembly
Slc41a3	assembly
1700031F10Rik	assembly
Tmem43	assembly
Kbtbd12	assembly
Isy1	assembly
Efcc1	assembly
Zxdc	assembly
Eefsec	assembly
Vmn1r43	assembly
Vmn1r42	assembly
Vmn1r52	assembly
V1ra8	assembly
Vmn1r50	assembly
Vmn1r53	assembly
Vmn1r44	assembly
Vmn1r40	assembly
Magi1	assembly
Suclg2	assembly
Slc25a26	assembly
Rbsn	assembly
Mrps25	assembly
Tpt1	assembly
Chl1	assembly
Gpr27	assembly
Foxp1	assembly
Rybp	assembly
Cntn4	assembly
Cntn6	assembly
Crbn	assembly
Arl8b	assembly
Trnt1	assembly
Edem1	assembly
Oxtr	assembly
Sec13	assembly
Tamm41	assembly
Fancd2os	assembly
Brox	assembly
Setd5	assembly
Atg7	assembly
Fancd2	assembly
Brpf1	assembly
Ghrl	assembly
Srgap3	assembly
Il17rc	assembly
Cidec	assembly
Ninj2	assembly
Tuba8	assembly
Cand2	assembly
3110021A11Rik	assembly
Zfand4	assembly
Washc2	assembly
Ankrd26	assembly
Rasgef1a	assembly
Marchf8	assembly
Zfp248	assembly
4931430N09Rik	assembly
4933440N22Rik	assembly
Erc1	assembly
9530062K07Rik	assembly
Slc6a12	assembly
Slc6a13	assembly
Aicda	assembly
Acrbp	assembly
Mrpl51	assembly
Ncapd2	assembly
Ptms	assembly
Clec4b1	assembly
Rimklb	assembly
Nanog	assembly
1700063H04Rik	assembly
Foxj2	assembly
Cd163	assembly
Mug1	assembly
Klra15	assembly
Clec7a	assembly
Tas2r103	assembly
Tas2r116	assembly
Tas2r140	assembly
Nrip2	assembly
Clec1b	assembly
Ndufa9	assembly
Tspan11	assembly
Clec2g	assembly
Tex52	assembly
Clec12b	assembly
5430401F13Rik	assembly
5530400C23Rik	assembly
Klrb1b	assembly
Clec2d	assembly
Clec2i	assembly
Clec2h	assembly
Klra18	assembly
Klra19	assembly
Arhgdib	assembly
Hebp1	assembly
Aebp2	assembly
Slco1b2	assembly
Igbp1b	assembly
Atf7ip	assembly
Pde3a	assembly
Slco1c1	assembly
Dera	assembly
Mgst1	assembly
Plbd1	assembly
Golt1b	assembly
Rpl38	assembly
Mansc1	assembly
Art4	assembly
Erp27	assembly
Fam234b	assembly
Gprc5d	assembly
Plcz1	assembly
Gpr19	assembly
C2cd5	assembly
C2cd5	assembly
Bicd1	assembly
Rep15	assembly
Resf1	assembly
Fgfr1op2	assembly
Ppfibp1	assembly
Tm7sf3	assembly
Smco2	assembly
Rassf8	assembly
1700034J05Rik	assembly
Ccdc91	assembly
Sinhcaf	assembly
Atp6v1b1	assembly
Calu	assembly
Tfec	assembly
Slco1a1	assembly
Hpgds	assembly
Gstk1	assembly
Slc6a1	assembly
Prss3	assembly
Prss2	assembly
Smyd5	assembly
Olr1	assembly
Gimap7	assembly
Nr2c2	assembly
Akr1b10	assembly
Prb1b	assembly
Pdia4	assembly
Klra23	assembly
Alms1	assembly
Klra21	assembly
Tas2r14	assembly
Vmn1r48	assembly
Vmn1r54	assembly
Vmn1r29	assembly
Vmn1r-ps8	assembly
Vmn1r25	assembly
Erc1	assembly
Vmn1r37	assembly
Vmn1r36	assembly
Vmn1r35	assembly
Vmn1r38	assembly
Vmn1r33	assembly
Vmn1r32	assembly
Vmn1r17	assembly
Vmn1r26	assembly
Vmn1r24	assembly
Vmn1r5	assembly
Vmn1r6	assembly
Vmn1r4	assembly
Vmn1r30	assembly
Vmn1r22	assembly
Vmn1r23	assembly
Vmn1r28	assembly
Vmn1r18	assembly
Vmn1r19	assembly
Vmn1r21	assembly
Vmn1r9	assembly
Vmn1r7	assembly
Vmn1r8	assembly
Vmn1r27	assembly
Cyp26b1	assembly
Clstn3	assembly
Il23r	assembly
Lrrc4	assembly
Akr1d1	assembly
Gys2	assembly
Mrps35	assembly
Moxd2	assembly
Mug2	assembly
Ruvbl1	assembly
Hnrnpf	assembly
Ndufb2	assembly
Gadd45a	assembly
Zfp422	assembly
Ccdc136	assembly
Tcaf2	assembly
Kbtbd2	assembly
Ano2	assembly
Gars1	assembly
Klre1	assembly
Tspan33	assembly
Parp12	assembly
Zfp786	assembly
Lncpint	assembly
Bmal2	assembly
Eva1a	assembly
Uroc1	assembly
Gm56926	assembly
Plekhg6	assembly
Aak1	assembly
Fkbp14	assembly
BC048671	assembly
Vgll4	assembly
Gxylt2	assembly
Far2	assembly
Bms1	assembly
Zfp775	assembly
C1rl	assembly
Casd1	assembly
D630045J12Rik	assembly
Fancd2	assembly
Hdac11	assembly
Luc7l2	assembly
Gprc5a	assembly
Rerg	assembly
Aoc1l3	assembly
Tas2r105	assembly
Tas2r108	assembly
Tas2r135	assembly
Tas2r136	assembly
Tas2r139	assembly
Tas2r143	assembly
Tas2r144	assembly
Vmn1r47	assembly
Vmn1r16	assembly
Vmn2r26	assembly
Iqub	assembly
Ccser1	assembly
Tnip3	assembly
Plxna4os2	assembly
A230083G16Rik	assembly
B4galnt3	assembly
Tmtc1	assembly
A2ml1	assembly
Thnsl2	assembly
Fam180a	assembly
Clec2e	assembly
Tcaf3	assembly
Prmt8	assembly
Clec12a	assembly
Tapbpl	assembly
Tas2r102	assembly
Tas2r104	assembly
Tas2r106	assembly
Tas2r107	assembly
Tas2r109	assembly
Tas2r110	assembly
Tas2r113	assembly
Tas2r114	assembly
Tas2r115	assembly
Tas2r117	assembly
Tas2r118	assembly
Tas2r120	assembly
Tas2r121	assembly
Tas2r123	assembly
Tas2r124	assembly
Tas2r125	assembly
Tas2r126	assembly
Tas2r129	assembly
Tas2r130	assembly
Tas2r131	assembly
Tas2r138	assembly
Vmn1r46	assembly
Zfp637	assembly
Rpl30-ps1	assembly
Minpp1-ps	assembly
Ybx1-ps2	assembly
Vmn1r-ps25	assembly
Vmn1r-ps26	assembly
Vmn1r-ps27	assembly
Vmn1r-ps28	assembly
Vmn1r-ps34	assembly
Vmn1r-ps10	assembly
Tas2r146-ps1	assembly
Tas2r111-ps2	assembly
Tas2r145-ps3	assembly
Tas2r141-ps4	assembly
Tas2r142-ps5	assembly
Prb1a	assembly
Zfp783	assembly
AY512915	assembly
Wipf3	assembly
Igkv9-129	assembly
Igkv7-33	assembly
Gapdh	assembly
Npm3-ps1	assembly
Mug3-ps	assembly
D15Ertd556e	ePCR
D0Nds23	ePCR
D0Nds34	ePCR
D0Nds38	ePCR
D0Nds42	ePCR
Mgll-rs2	ePCR

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. The chromosomal locations were downloaded from the Ensembl database. The relative band sizes and therefor cytogenetic positions within a chromosome are estimated from a drawing of the karyotype. The total bp length of the euchromatic chromosome sequence is divided up in
  proportion.