1700111E14Rik MGI Mouse Gene Detail - MGI:1920835

Sequence Map

Chr6:36913977-36962719 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920835	lncRNA gene	Chr6:36913977-36962719 (+)
129S1/SvImJ	ENSMUSG00200046566	lncRNA gene	Chr6:33960458-34009205 (+)
A/J	ENSMUSG00195044378	lncRNA gene	Chr6:33937801-33986534 (+)
AKR/J	ENSMUSG00220009600	lncRNA gene	Chr6:33536480-33585212 (+)
BALB/cJ	ENSMUSG00180048621	lncRNA gene	Chr6:34066586-34115324 (+)
C3H/HeJ	ENSMUSG00175050636	lncRNA gene	Chr6:33894919-33943649 (+)
C57BL/6NJ	ENSMUSG00215048468	lncRNA gene	Chr6:33972701-34021439 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003840	antisense lncRNA gene	Chr6:31551765-31593316 (+)
CAST/EiJ	ENSTCUG00005038551	lncRNA gene	Chr6:33461120-33505709 (+)
CBA/J	ENSMUSG00210052394	lncRNA gene	Chr6:33952212-34000924 (+)
DBA/2J	ENSMUSG00185050341	lncRNA gene	Chr6:34053125-34101853 (+)
FVB/NJ	ENSMUSG00205051033	lncRNA gene	Chr6:34024456-34073188 (+)
JF1/MsJ	ENSUMUG00000030406	lncRNA gene	Chr6:33710208-33755159 (+)
LP/J	ENSMUSG00230044525	lncRNA gene	Chr6:34966566-35015304 (+)
NOD/ShiLtJ	ENSMUSG00190049263	lncRNA gene	Chr6:33818979-33867708 (+)
NZO/HlLtJ	ENSMUSG00225010449	lncRNA gene	Chr6:36954611-37003339 (+)
PWK/PhJ	ENSLUMG00010047850	lncRNA gene	Chr6:33457901-33500984 (+)
SPRET/EiJ	ENSMSPG00010035106	lncRNA gene	Chr6:34032230-34077553 (+)
WSB/EiJ	ENSIUOG00005035673	lncRNA gene	Chr6:34151401-34200128 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000029837	Ensembl Gene Model \| MGI Sequence Detail	48743	C57BL/6J	± kb
transcript	ENSMUST00000313184	Ensembl \| MGI Sequence Detail	972	Not Applicable
polypeptide	Q9D9B6	UniProt \| EBI \| MGI Sequence Detail	144	Not Applicable

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Summaries

All 12
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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