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Ybx1-ps2 Pseudogene Detail
Summary
  • Symbol
    Ybx1-ps2
  • Name
    Y box protein 1, pseudogene 2
  • Synonyms
    Msy-3
Location &
Maps
more
  • Sequence Map
    Chr6:37663174-37664130 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 16.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    184 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2137671
 pseudogene Chr6:37662572-37664240 (-)
129S1/SvImJ ENSMUSG00200047419
 pseudogene Chr6:34717960-34718916 (-)
A/J ENSMUSG00195044819
 pseudogene Chr6:34689779-34690735 (-)
AKR/J ENSMUSG00220009693
 pseudogene Chr6:34288439-34289395 (-)
BALB/cJ ENSMUSG00180047702
 pseudogene Chr6:34818273-34819229 (-)
C3H/HeJ ENSMUSG00175049685
 pseudogene Chr6:34647700-34648656 (-)
C57BL/6NJ ENSMUSG00215047802
 pseudogene Chr6:34724668-34725624 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011857
 pseudogene Chr6:32294033-32294952 (-)
CAST/EiJ ENSTCUG00005037971
 pseudogene Chr6:34209569-34210525 (-)
CBA/J ENSMUSG00210052133
 pseudogene Chr6:34704934-34705890 (-)
DBA/2J ENSMUSG00185048794
 pseudogene Chr6:34805500-34806456 (-)
FVB/NJ ENSMUSG00205049877
 pseudogene Chr6:34781787-34782744 (-)
JF1/MsJ ENSUMUG00000030167
 pseudogene Chr6:34455626-34456710 (-)
LP/J ENSMUSG00230044651
 pseudogene Chr6:35723866-35724822 (-)
NOD/ShiLtJ ENSMUSG00190048652
 pseudogene Chr6:34571713-34572669 (-)
NZO/HlLtJ ENSMUSG00225010481
 pseudogene Chr6:37706446-37707402 (-)
PWK/PhJ ENSLUMG00010047328
 pseudogene Chr6:34206626-34207710 (-)
SPRET/EiJ ENSMSPG00010034131
 pseudogene Chr6:34806620-34807564 (-)
WSB/EiJ ENSIUOG00005033586
 pseudogene Chr6:34905776-34906732 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107035 Ensembl Gene Model | MGI Sequence Detail 957 C57BL/6J ±  kb
transcript ENSMUST00000201305 Ensembl | MGI Sequence Detail 957 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 2
  • Earliest
    J:139507 Berghella L, et al., A highly conserved molecular switch binds MSY-3 to regulate myogenin repression in postnatal muscle. Genes Dev. 2008 Aug 1;22(15):2125-38
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory