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Vmn1r4 Gene Detail
Summary
  • Symbol
    Vmn1r4
  • Name
    vomeronasal 1 receptor 4
  • Synonyms
    C230065D10Rik, V1rc21
Location &
Maps
more
  • Sequence Map
    Chr6:56901078-56934593 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 27.76 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    909 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159457
 protein coding gene Chr6:56901000-56935085 (+)
129S1/SvImJ ENSMUSG00200005804
 protein coding gene Chr6:53866848-53899089 (+)
A/J ENSMUSG00195033141
 protein coding gene Chr6:53612227-53651643 (+)
AKR/J ENSMUSG00220005665
 protein coding gene Chr6:53304604-53346240 (+)
BALB/cJ ENSMUSG00180009074
 protein coding gene Chr6:53901993-53948809 (+)
C3H/HeJ ENSMUSG00175034528
 protein coding gene Chr6:53670049-53710128 (+)
C57BL/6NJ ENSMUSG00215025004
 protein coding gene Chr6:53886821-53926919 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028426
 protein coding gene Chr6:51344885-51349754 (+)
CAST/EiJ ENSTCUG00005039585
 protein coding gene Chr6:53118288-53165877 (+)
CBA/J ENSMUSG00210030161
 protein coding gene Chr6:53707354-53747415 (+)
DBA/2J ENSMUSG00185018256
 protein coding gene Chr6:54287008-54329739 (+)
FVB/NJ ENSMUSG00205022775
 protein coding gene Chr6:53879649-53915053 (+)
JF1/MsJ ENSUMUG00000024701
 protein coding gene Chr6:53665939-53698195 (+)
LP/J ENSMUSG00230009514
 protein coding gene Chr6:55363754-55395983 (+)
NOD/ShiLtJ ENSMUSG00190008401
 protein coding gene Chr6:53620184-53660279 (+)
NZO/HlLtJ ENSMUSG00225012901
 protein coding gene Chr6:57355591-57387848 (+)
PWK/PhJ ENSLUMG00010017926
 protein coding gene Chr6:53425091-53457497 (+)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005019837
 protein coding gene Chr6:53974790-54015158 (+)



Homology
more
  • Human Ortholog
    VN1R17P, vomeronasal 1 receptor 17 pseudogene
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VN1R17P, vomeronasal 1 receptor 17 pseudogene
  • Synonyms
    GPCR
  • Links
    NCBI Gene ID: 441931
    UniProt: Q8TDU5

  • Chr Location
    1q44; chr1:247236868-247237957 (-)  GRCh38
  • Human Ortholog
    VN1R5, vomeronasal 1 receptor 5 (gene/pseudogene)
  • Synonyms
    V1RL5
  • Links
    NCBI Gene ID: 317705
    UniProt: Q7Z5H4

  • Chr Location
    1q44; chr1:247255972-247257210 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171194 NCBI Gene Model | MGI Sequence Detail 33516 C57BL/6J ±  kb
transcript NM_134176 RefSeq | MGI Sequence Detail 894 Not Specified  
polypeptide NP_598937 RefSeq | MGI Sequence Detail 297 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:2441897
References
more
  • Summaries
    All 22
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory