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Vmn1r27 Gene Detail
Summary
  • Symbol
    Vmn1r27
  • Name
    vomeronasal 1 receptor 27
  • Synonyms
    V1rc33
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159470
    NCBI Gene: 171206
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:58192091-58193002 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, 27.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159470
protein coding gene Chr6:58190076-58195806 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030799
protein coding gene Chr6:56932313-56933323 (+)
A/J MGP_AJ_G0030771
protein coding gene Chr6:54329590-54330496 (+)
AKR/J MGP_AKRJ_G0030708
protein coding gene Chr6:57082883-57083789 (-)
BALB/cJ MGP_BALBcJ_G0030782
protein coding gene Chr6:54719810-54720716 (+)
C3H/HeJ MGP_C3HHeJ_G0030495
protein coding gene Chr6:56225832-56226738 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031237
protein coding gene Chr6:58207063-58207974 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0030479
protein coding gene Chr6:61555543-61556449 (-)
DBA/2J MGP_DBA2J_G0030630
protein coding gene Chr6:54984431-54985337 (-)
FVB/NJ MGP_FVBNJ_G0030585
protein coding gene Chr6:54566130-54567036 (-)
LP/J MGP_LPJ_G0030702
protein coding gene Chr6:56879508-56880409 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030619
protein coding gene Chr6:64074318-64075224 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031275
protein coding gene Chr6:56951921-56952832 (-)
PWK/PhJ MGP_PWKPhJ_G0029609
protein coding gene Chr6:53853954-53854855 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0029984
protein coding gene Chr6:57125615-57126516 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171206 NCBI Gene Model | MGI Sequence Detail 912 C57BL/6J ±  kb
transcript NM_134436 RefSeq | MGI Sequence Detail 912 Not Specified  
polypeptide NP_602318 RefSeq | MGI Sequence Detail 303 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory