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Vmn1r9 Gene Detail
Summary
  • Symbol
    Vmn1r9
  • Name
    vomeronasal 1 receptor 9
  • Synonyms
    V1rc30
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159466
    NCBI Gene: 171203
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:57047880-57048930 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, 27.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159466
protein coding gene Chr6:57043772-57051891 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030789
protein coding gene Chr6:56589575-56597927 (+)
A/J MGP_AJ_G0030758
protein coding gene Chr6:53889559-54000695 (+)
AKR/J MGP_AKRJ_G0030685
protein coding gene Chr6:55696803-55789226 (+)
BALB/cJ MGP_BALBcJ_G0030770
protein coding gene Chr6:54305251-54402132 (+)
C3H/HeJ MGP_C3HHeJ_G0030483
protein coding gene Chr6:55771788-55912311 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031225
protein coding gene Chr6:57878005-57879189 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0030457
protein coding gene Chr6:60168366-60269291 (+)
DBA/2J MGP_DBA2J_G0030607
protein coding gene Chr6:53782827-53862283 (+)
FVB/NJ MGP_FVBNJ_G0030558
protein coding gene Chr6:53360139-53361321 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0030593
protein coding gene Chr6:62642320-62645062 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0029962
protein coding gene Chr6:55790563-55793787 (+)



Homology
more
  • Human Ortholog
    VN1R5, vomeronasal 1 receptor 5 (gene/pseudogene)
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VN1R5, vomeronasal 1 receptor 5 (gene/pseudogene)
  • Synonyms
    V1RL5
  • Links
    NCBI Gene ID: 317705
    neXtProt AC: NX_Q7Z5H4
    UniProt: Q7Z5H4

  • Chr Location
    1q44; chr1:247255972-247257210 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype reference
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 171203 NCBI Gene Model | MGI Sequence Detail 1051 C57BL/6J ±  kb
transcript NM_134185 RefSeq | MGI Sequence Detail 1051 Not Specified  
polypeptide NP_598946 RefSeq | MGI Sequence Detail 299 Not Specified  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:74518 Rodriguez I, et al., Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Nat Neurosci. 2002 Feb;5(2):134-40
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory