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Vmn1r13 Gene Detail
Summary
  • Symbol
    Vmn1r13
  • Name
    vomeronasal 1 receptor 13
  • Synonyms
    V1rc5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2148526
    NCBI Gene: 113862
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:57186843-57187745 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 27.82 cM, cytoband C1
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148526
 protein coding gene Chr6:57180275-57191784 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030792
 protein coding gene Chr6:56711232-56712134 (+)
A/J MGP_AJ_G0030762
 protein coding gene Chr6:54099915-54100817 (+)
AKR/J MGP_AKRJ_G0030689
 protein coding gene Chr6:55902686-55903588 (+)
BALB/cJ MGP_BALBcJ_G0030774
 protein coding gene Chr6:54507217-54508119 (+)
C3H/HeJ MGP_C3HHeJ_G0030487
 protein coding gene Chr6:56019970-56020872 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031229
 protein coding gene Chr6:57986613-57987515 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028429
 protein coding gene Chr6:51624657-51625558 (+)
CAST/EiJ MGP_CASTEiJ_G0029887
 protein coding gene Chr6:55816911-55817813 (+)
CBA/J MGP_CBAJ_G0030460
 protein coding gene Chr6:60401590-60402492 (+)
DBA/2J MGP_DBA2J_G0030611
 protein coding gene Chr6:53952480-53953382 (+)
FVB/NJ MGP_FVBNJ_G0030563
 protein coding gene Chr6:53562904-53563806 (+)
LP/J MGP_LPJ_G0030695
 protein coding gene Chr6:56677490-56678392 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030597
 protein coding gene Chr6:62859389-62860291 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031255
 protein coding gene Chr6:55873303-55874205 (+)
PWK/PhJ MGP_PWKPhJ_G0029601
 protein coding gene Chr6:53656426-53657328 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029434
 protein coding gene Chr6:55233312-55234214 (+)
WSB/EiJ MGP_WSBEiJ_G0029966
 protein coding gene Chr6:55960395-55961299 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 113862 NCBI Gene Model | MGI Sequence Detail 903 C57BL/6J ±  kb
transcript NM_053235 RefSeq | MGI Sequence Detail 903 Not Specified  
polypeptide NP_444465 RefSeq | MGI Sequence Detail 300 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 14
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:66234 Del Punta K, et al., Sequence diversity and genomic organization of vomeronasal receptor genes in the mouse. Genome Res. 2000 Dec;10(12):1958-67
  • Latest
    J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory