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Apc Gene Detail
Summary
  • Symbol
    Apc
  • Name
    adenomatosis polyposis coli
  • Synonyms
    CC1, Min
  • Feature Type
    protein coding gene
  • IDs
    MGI:88039
    NCBI Gene: 11789
  • Gene Overview
    MyGene.info: APC
Location & Maps
more
  • Sequence Map
    Chr18:34220924-34318608 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      97685 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 18.53 cM
  • Mapping Data
    20 experiments
Homology
more
  • Human Ortholog
    APC, APC, WNT signaling pathway regulator
  • Vertebrate Orthologs
    9
  • Human Ortholog
    APC, APC, WNT signaling pathway regulator
    Orthology source: HGNC, HomoloGene
  • Synonyms
    BTPS2, DP2, DP2.5, DP3, GS, PPP1R46
  • Links
    NCBI Gene ID: 324
    neXtProt AC: NX_P25054

  • Chr Location
    5q22.2; chr5:112707505-112846239 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    6 with Apc mouse models; 5 with human APC associations

Human Disease Mouse Models
       Colorectal Cancer; CRC   OMIM: 114500 View 9 models
Familial Adenomatous Polyposis 1; FAP1   OMIM: 175100 View 9 models
Hepatocellular Carcinoma   OMIM: 114550 View 1 model
       Breast Cancer   OMIM: 114480 View 2 models
Ovarian Cancer   OMIM: 167000 View 2 models
Prostate Cancer   OMIM: 176807 View 1 model
       Desmoid Disease, Hereditary   OMIM: 135290
Gastric Cancer   OMIM: 613659
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    11 with disease annotations
  • References
    59 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    218 phenotypes from 26 alleles in 54 genetic backgrounds
    133 phenotypes from multigenic genotypes
    20 images
    971 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    89
  • Chemically induced (ENU)
    2
  • Gene trapped
    62
  • Targeted
    25
  • Genomic Mutations
    1 involving Apc
  • Incidental Mutations
Most targeted and hypomorphic heterozygous mutants develop intestinal polyps and colorectal cancer, associated with anemia from intestinal bleeding. Homozygotes are embryonic lethal. Homozygotes for a mild alleles survive and have less extreme tumor incidence.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035932 VEGA Gene Model | MGI Sequence Detail 97685 C57BL/6J ±  kb
transcript OTTMUST00000092329 VEGA | MGI Sequence Detail 8867 Not Applicable  
polypeptide OTTMUSP00000051004 VEGA | MGI Sequence Detail 2842 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    553 from dbSNP Build 142
  • PCR
  • RFLP
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 240
    Genomic 1
    cDNA 230
    Primer pair 8
    Other 1

    Microarray probesets 8
Other
Accession IDs
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MGD-MRK-1347, MGD-MRK-16245, MGI:2147196, MGI:2147309, MGI:2147352
References
more
  • Summaries
    All 1112
    Developmental Gene Expression 57
    Diseases 59
    Gene Ontology 107
    Phenotypes 971
  • Earliest
    J:103 Lane PW, et al., Mahogany, a recessive color mutation in linkage group V of the mouse. J Hered. 1960;51:228-230
  • Latest
    J:232780 Tao Y, et al., Hsp70 exerts oncogenic activity in the Apc mutant Min mouse model. Carcinogenesis. 2016 Jul;37(7):731-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory