Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Sox9

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes SOX9
- Mouse genes Sox9
- Rat genes Sox9
- Zfish genes sox9a,sox9b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sox9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008013	beta-catenin binding	Sox9	IDA		Mouse	MGI:MGI:3044231\|PMID:15132997
Molecular Function	GO:0008013	beta-catenin binding	Sox9	IPI	PR:Q02248	Mouse	PMID:19725955
Molecular Function	GO:0043425	bHLH transcription factor binding	Sox9	IPI	UniProtKB:P21677	Rat	PMID:19828133\|RGD:8553796
Molecular Function	GO:0003682	chromatin binding	SOX9	IDA		Human	PMID:20484372
Molecular Function	GO:0003682	chromatin binding	sox9a	IDA		Zfish	PMID:25568117
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	SOX9	IDA		Human	PMID:10805756
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Sox9	IDA		Mouse	MGI:MGI:5142387\|PMID:10805756
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Sox9	IDA		Mouse	MGI:MGI:5284779\|PMID:17525254
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Sox9	IDA		Mouse	PMID:22500632
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Sox9	IDA		Rat	PMID:10805756\|RGD:8553866
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Sox9	IDA		Rat	PMID:26150426\|RGD:11526869
Molecular Function	GO:0003677	DNA binding	Sox9	IDA		Mouse	MGI:MGI:5009531\|PMID:18403418
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:20484372
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:20530484
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:21367821
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:22110751
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:31194875
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Mouse	MGI:MGI:5142387\|PMID:10805756
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Mouse	MGI:MGI:4950303\|PMID:21367821
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Mouse	MGI:MGI:6251086\|PMID:25229425
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Mouse	MGI:MGI:6414737\|PMID:32103177
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Mouse	MGI:MGI:6414722\|PMID:26146088
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Mouse	PMID:21427722
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Sox9	IDA		Rat	PMID:11875113\|RGD:1299273
Molecular Function	GO:0003700	DNA-binding transcription factor activity	SOX9	IDA		Human	PMID:10805756
Molecular Function	GO:0003700	DNA-binding transcription factor activity	SOX9	IMP		Human	PMID:8640233
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17084361
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Sox9	IDA		Mouse	PMID:9755172
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Sox9	IMP		Rat	PMID:11514554\|RGD:70568
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:20484372
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	SOX9	IDA		Human	PMID:21412441
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Sox9	IDA		Mouse	MGI:MGI:5284779\|PMID:17525254
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Sox9	IDA		Mouse	PMID:22344693
Molecular Function	GO:0097157	pre-mRNA intronic binding	Sox9	IDA		Mouse	PMID:24191021
Molecular Function	GO:0005515	protein binding	SOX9	IPI	UniProtKB:P62157	Human	PMID:12810722
Molecular Function	GO:0005515	protein binding	SOX9	IPI	UniProtKB:O75030	Human	PMID:20530484
Molecular Function	GO:0005515	protein binding	SOX9	IPI	UniProtKB:P32243	Human	PMID:20530484
Molecular Function	GO:0005515	protein binding	SOX9	IPI	UniProtKB:Q3U108	Human	PMID:21346191
Molecular Function	GO:0005515	protein binding	SOX9	IPI	UniProtKB:Q96HY6	Human	PMID:28263186
Molecular Function	GO:0005515	protein binding	Sox9	IPI	UniProtKB:Q6IQX8	Mouse	MGI:MGI:5285147\|PMID:20940257
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:P54843	Mouse	PMID:12381733
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:Q3ULA2	Mouse	PMID:19047045
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:P33242	Mouse	PMID:12732652
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:Q9WVG6	Mouse	PMID:19725955
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:Q9WV60	Mouse	PMID:19047045
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:Q9DBH0	Mouse	PMID:21427722
Molecular Function	GO:0005515	protein binding	Sox9	IPI	PR:P20263	Mouse	PMID:22344693
Molecular Function	GO:0005515	protein binding	sox9a	IPI	ZFIN:ZDB-GENE-030131-2317	Zfish	PMID:25617839
Molecular Function	GO:0034236	protein kinase A catalytic subunit binding	SOX9	IPI	UniProtKB:P05132	Human	PMID:10805756
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	SOX9	IDA		Human	PMID:20530484
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	SOX9	IDA		Human	PMID:22110751
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Sox9	IDA		Mouse	PMID:15590666
Molecular Function	GO:0043565	sequence-specific DNA binding	SOX9	IDA		Human	PMID:31194875
Molecular Function	GO:0043565	sequence-specific DNA binding	Sox9	IDA		Mouse	MGI:MGI:6414722\|PMID:26146088
Molecular Function	GO:0043565	sequence-specific DNA binding	Sox9	IDA		Mouse	MGI:MGI:6251086\|PMID:25229425
Molecular Function	GO:0043565	sequence-specific DNA binding	Sox9	IDA		Mouse	PMID:15800003
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	SOX9	IDA		Human	PMID:28473536
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Sox9	IDA		Mouse	MGI:MGI:86312\|PMID:9119111
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Sox9	IDA		Mouse	PMID:17084361
Cellular Component	GO:0005737	cytoplasm	sox9a	IMP	ZFIN:ZDB-GENO-980202-938	Zfish	PMID:12397114
Cellular Component	GO:0005737	cytoplasm	sox9a	IMP	ZFIN:ZDB-MRPHLNO-070412-1,ZFIN:ZDB-MRPHLNO-070412-2	Zfish	PMID:12397114
Cellular Component	GO:0005654	nucleoplasm	SOX9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SOX9	IDA		Human	PMID:10805756
Cellular Component	GO:0005634	nucleus	SOX9	IDA		Human	PMID:12420222
Cellular Component	GO:0005634	nucleus	SOX9	IDA		Human	PMID:18512230
Cellular Component	GO:0005634	nucleus	SOX9	IDA		Human	PMID:26634652
Cellular Component	GO:0005634	nucleus	SOX9	IDA		Human	PMID:8640233
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	MGI:MGI:5285147\|PMID:20940257
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	MGI:MGI:5285125\|PMID:21512138
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	MGI:MGI:5142387\|PMID:10805756
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	MGI:MGI:4939090\|PMID:21212101
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:24924191
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:15944199
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:23946534
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:23786676
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:19725955
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:15585950
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:18287078
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:17350610
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:16207837
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:12915303
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:25972016
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:15590666
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:19269367
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:21464233
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:19796622
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:21427722
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:12133909
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:21991325
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:12782625
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:15229180
Cellular Component	GO:0005634	nucleus	Sox9	IDA		Mouse	PMID:21346191
Cellular Component	GO:0032991	protein-containing complex	SOX9	IDA		Human	PMID:20530484
Cellular Component	GO:0005667	transcription regulator complex	Sox9	IPI	UniProtKB:Q3U108	Mouse	PMID:21346191
Cellular Component	GO:0005667	transcription regulator complex	Sox9	IDA		Mouse	PMID:22344693
Cellular Component	GO:0005667	transcription regulator complex	Sox9	IDA		Rat	PMID:19828133\|RGD:8553796
Biological Process	GO:0097065	anterior head development	Sox9	IMP	MGI:MGI:5546026	Mouse	PMID:26234751
Biological Process	GO:0003180	aortic valve morphogenesis	SOX9	IDA		Human	PMID:22110751
Biological Process	GO:0006915	apoptotic process	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2684317	Mouse	PMID:17267606
Biological Process	GO:0006915	apoptotic process	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3587654	Mouse	PMID:16085486
Biological Process	GO:0048708	astrocyte differentiation	sox9a	IMP	ZFIN:ZDB-GENO-980202-938	Zfish	PMID:20023158
Biological Process	GO:0060018	astrocyte fate commitment	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19490914
Biological Process	GO:0030282	bone mineralization	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:11371614
Biological Process	GO:0001658	branching involved in ureteric bud morphogenesis	Sox9	IEP		Mouse	MGI:MGI:83252\|PMID:8787755
Biological Process	GO:0060532	bronchus cartilage development	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:24218621
Biological Process	GO:0019933	cAMP-mediated signaling	SOX9	IDA		Human	PMID:10805756
Biological Process	GO:0019933	cAMP-mediated signaling	Sox9	IDA		Rat	PMID:10805756\|RGD:8553866
Biological Process	GO:0060070	canonical Wnt signaling pathway	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:0001502	cartilage condensation	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:12414734
Biological Process	GO:0001502	cartilage condensation	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:10319868
Biological Process	GO:0051216	cartilage development	Sox9	IDA		Mouse	MGI:MGI:6414706\|PMID:15529345
Biological Process	GO:0051216	cartilage development	Sox9	IMP		Mouse	MGI:MGI:5908314\|PMID:28263186
Biological Process	GO:0051216	cartilage development	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:11371614
Biological Process	GO:0051216	cartilage development	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:0051216	cartilage development	Sox9	IEP		Rat	PMID:15512770\|RGD:1599098
Biological Process	GO:0051216	cartilage development	sox9a	IMP	ZFIN:ZDB-MRPHLNO-070412-1,ZFIN:ZDB-MRPHLNO-070412-2	Zfish	PMID:12397114
Biological Process	GO:0051216	cartilage development	sox9a	IMP	ZFIN:ZDB-MRPHLNO-070412-1	Zfish	PMID:18950725
Biological Process	GO:0051216	cartilage development	sox9a	IMP	ZFIN:ZDB-GENO-980202-938	Zfish	PMID:12397114
Biological Process	GO:0051216	cartilage development	sox9a	IMP	ZFIN:ZDB-GENO-030219-2	Zfish	PMID:15689370
Biological Process	GO:0051216	cartilage development	sox9a	IMP	ZFIN:ZDB-MRPHLNO-070412-2	Zfish	PMID:18950725
Biological Process	GO:0051216	cartilage development	sox9b	IMP	ZFIN:ZDB-MRPHLNO-041110-4,ZFIN:ZDB-MRPHLNO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0051216	cartilage development	sox9b	IMP	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0060536	cartilage morphogenesis	sox9a	IMP	ZFIN:ZDB-GENO-980202-938	Zfish	PMID:9007254
Biological Process	GO:0045165	cell fate commitment	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:15893981
Biological Process	GO:0008283	cell population proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2684317	Mouse	PMID:17267606
Biological Process	GO:0008283	cell population proliferation	Sox9	IMP	MGI:MGI:2385469	Mouse	PMID:18723011
Biological Process	GO:0008283	cell population proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3053819	Mouse	PMID:17698607
Biological Process	GO:0061323	cell proliferation involved in heart morphogenesis	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0098609	cell-cell adhesion	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0071364	cellular response to epidermal growth factor stimulus	Sox9	IDA		Mouse	MGI:MGI:5285125\|PMID:21512138
Biological Process	GO:0071504	cellular response to heparin	Sox9	IDA		Mouse	MGI:MGI:5285125\|PMID:21512138
Biological Process	GO:0071347	cellular response to interleukin-1	SOX9	IEP		Human	PMID:20079164
Biological Process	GO:0071260	cellular response to mechanical stimulus	Sox9	IDA		Mouse	MGI:MGI:5285125\|PMID:21512138
Biological Process	GO:0071300	cellular response to retinoic acid	SOX9	IEP		Human	PMID:12420222
Biological Process	GO:0071300	cellular response to retinoic acid	Sox9	IDA		Mouse	PMID:19389355
Biological Process	GO:0071560	cellular response to transforming growth factor beta stimulus	SOX9	IDA		Human	PMID:21401405
Biological Process	GO:0071560	cellular response to transforming growth factor beta stimulus	Sox9	IEP		Mouse	MGI:MGI:5284779\|PMID:17525254
Biological Process	GO:0007417	central nervous system development	Sox9	IEP		Mouse	MGI:MGI:86312\|PMID:9119111
Biological Process	GO:0002063	chondrocyte development	Sox9	IMP		Mouse	PMID:18415932
Biological Process	GO:0002062	chondrocyte differentiation	Sox9	IMP		Mouse	MGI:MGI:3044231\|PMID:15132997
Biological Process	GO:0002062	chondrocyte differentiation	Sox9	IMP		Mouse	MGI:MGI:6414736\|PMID:29644115
Biological Process	GO:0002062	chondrocyte differentiation	Sox9	IDA		Mouse	MGI:MGI:6414737\|PMID:32103177
Biological Process	GO:0002062	chondrocyte differentiation	Sox9	IEP		Mouse	MGI:MGI:86312\|PMID:9119111
Biological Process	GO:0002062	chondrocyte differentiation	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:12414734
Biological Process	GO:0002062	chondrocyte differentiation	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:11371614
Biological Process	GO:0003413	chondrocyte differentiation involved in endochondral bone morphogenesis	SOX9	IMP		Human	PMID:20676705
Biological Process	GO:0003415	chondrocyte hypertrophy	Sox9	IMP		Mouse	MGI:MGI:4950303\|PMID:21367821
Biological Process	GO:0006338	chromatin remodeling	SOX9	IDA		Human	PMID:20484372
Biological Process	GO:0090103	cochlea morphogenesis	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:0007010	cytoskeleton organization	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0035118	embryonic pectoral fin morphogenesis	sox9a	IMP	ZFIN:ZDB-GENO-980202-938	Zfish	PMID:12397114
Biological Process	GO:0035118	embryonic pectoral fin morphogenesis	sox9a	IMP	ZFIN:ZDB-GENO-030219-2	Zfish	PMID:15689370
Biological Process	GO:0035118	embryonic pectoral fin morphogenesis	sox9a	IMP	ZFIN:ZDB-MRPHLNO-070412-1,ZFIN:ZDB-MRPHLNO-070412-2	Zfish	PMID:12397114
Biological Process	GO:0035118	embryonic pectoral fin morphogenesis	sox9b	IMP	ZFIN:ZDB-MRPHLNO-041110-4,ZFIN:ZDB-MRPHLNO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0035118	embryonic pectoral fin morphogenesis	sox9b	IMP	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0003203	endocardial cushion morphogenesis	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:11951052
Biological Process	GO:0060350	endochondral bone morphogenesis	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:11371614
Biological Process	GO:0031018	endocrine pancreas development	Sox9	IMP	MGI:MGI:2385469	Mouse	PMID:18723011
Biological Process	GO:0031018	endocrine pancreas development	sox9b	IMP	ZFIN:ZDB-GENO-161220-6	Zfish	PMID:27565026
Biological Process	GO:0031018	endocrine pancreas development	sox9b	IMP	ZFIN:ZDB-GENO-161220-7	Zfish	PMID:27565026
Biological Process	GO:0007173	epidermal growth factor receptor signaling pathway	Sox9	IDA		Mouse	MGI:MGI:5285125\|PMID:21512138
Biological Process	GO:0050673	epithelial cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3053819	Mouse	PMID:17698607
Biological Process	GO:0050673	epithelial cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:0060517	epithelial cell proliferation involved in prostatic bud elongation	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3689997	Mouse	PMID:18325490
Biological Process	GO:0001837	epithelial to mesenchymal transition	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:15096597
Biological Process	GO:0060441	epithelial tube branching involved in lung morphogenesis	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:24058167
Biological Process	GO:0060441	epithelial tube branching involved in lung morphogenesis	Sox9	IGI	MGI:MGI:96680	Mouse	PMID:24058167
Biological Process	GO:0070371	ERK1 and ERK2 cascade	Sox9	IDA		Mouse	MGI:MGI:5285125\|PMID:21512138
Biological Process	GO:0085029	extracellular matrix assembly	Sox9	IMP	MGI:MGI:2176205,MGI:MGI:2385468	Mouse	PMID:20881014
Biological Process	GO:0030198	extracellular matrix organization	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0030198	extracellular matrix organization	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0010467	gene expression	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:29659575
Biological Process	GO:0002067	glandular epithelial cell differentiation	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17681175
Biological Process	GO:0021780	glial cell fate specification	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:12842915
Biological Process	GO:0003430	growth plate cartilage chondrocyte growth	Sox9	IMP		Mouse	MGI:MGI:5317468\|PMID:22421045
Biological Process	GO:0001942	hair follicle development	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3587654	Mouse	PMID:16085486
Biological Process	GO:0070384	Harderian gland development	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3045749	Mouse	PMID:24924191
Biological Process	GO:0007507	heart development	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:15096597
Biological Process	GO:0003170	heart valve development	Sox9	IMP		Mouse	MGI:MGI:4947506\|PMID:20056916
Biological Process	GO:0003170	heart valve development	sox9b	IMP	ZFIN:ZDB-MRPHLNO-050322-1	Zfish	PMID:23775563
Biological Process	GO:0003188	heart valve formation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0003179	heart valve morphogenesis	Sox9	IMP	MGI:MGI:2176070,MGI:MGI:2385468	Mouse	PMID:17350610
Biological Process	GO:0061008	hepaticobiliary system development	sox9b	IMP	ZFIN:ZDB-GENO-120612-2	Zfish	PMID:22719264
Biological Process	GO:0048873	homeostasis of number of cells within a tissue	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:24218621
Biological Process	GO:0048839	inner ear development	sox9a	IMP	ZFIN:ZDB-MRPHLNO-041110-2	Zfish	PMID:25568117
Biological Process	GO:0048839	inner ear development	sox9a	IMP	ZFIN:ZDB-MRPHLNO-090422-7,ZFIN:ZDB-MRPHLNO-090422-8	Zfish	PMID:19132125
Biological Process	GO:0048839	inner ear development	sox9a	IGI	ZFIN:ZDB-GENO-980202-1565,ZFIN:ZDB-MRPHLNO-090422-7,ZFIN:ZDB-MRPHLNO-090422-8	Zfish	PMID:19132125
Biological Process	GO:0048839	inner ear development	sox9b	IGI	ZFIN:ZDB-GENO-980202-1565,ZFIN:ZDB-MRPHLNO-070130-7,ZFIN:ZDB-MRPHLNO-090422-9	Zfish	PMID:19132125
Biological Process	GO:0048839	inner ear development	sox9b	IMP	ZFIN:ZDB-MRPHLNO-070130-7,ZFIN:ZDB-MRPHLNO-090422-9	Zfish	PMID:19132125
Biological Process	GO:0060575	intestinal epithelial cell differentiation	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17681175
Biological Process	GO:0060729	intestinal epithelial structure maintenance	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17681175
Biological Process	GO:0035622	intrahepatic bile duct development	Sox9	IMP	MGI:MGI:2177602,MGI:MGI:2385468	Mouse	PMID:19403103
Biological Process	GO:0050935	iridophore differentiation	sox9b	IMP	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0032808	lacrimal gland development	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3045749	Mouse	PMID:24924191
Biological Process	GO:0060174	limb bud formation	Sox9	IEP		Mouse	MGI:MGI:5285147\|PMID:20940257
Biological Process	GO:0060487	lung epithelial cell differentiation	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0061145	lung smooth muscle development	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:24218621
Biological Process	GO:0019100	male germ-line sex determination	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2673819	Mouse	PMID:16207837
Biological Process	GO:0019100	male germ-line sex determination	Sox9	IMP	MGI:MGI:3580900	Mouse	PMID:11431689
Biological Process	GO:0008584	male gonad development	SOX9	IEP		Human	PMID:17848411
Biological Process	GO:0008584	male gonad development	SOX9	IMP		Human	PMID:8640233
Biological Process	GO:0008584	male gonad development	Sox9	IEP		Mouse	MGI:MGI:83252\|PMID:8787755
Biological Process	GO:0008584	male gonad development	Sox9	IEP		Mouse	MGI:MGI:5284814\|PMID:12420222
Biological Process	GO:0008584	male gonad development	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:15056615
Biological Process	GO:0008584	male gonad development	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:15056615
Biological Process	GO:0008584	male gonad development	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19124014
Biological Process	GO:0008584	male gonad development	Sox9	IMP	MGI:MGI:3041881	Mouse	PMID:15056615
Biological Process	GO:0008584	male gonad development	Sox9	IMP	MGI:MGI:3580900	Mouse	PMID:11431689
Biological Process	GO:0030238	male sex determination	Sox9	IGI	MGI:MGI:98660	Mouse	PMID:16700629
Biological Process	GO:0030238	male sex determination	Sox9	IGI	MGI:MGI:104723	Mouse	PMID:16700629
Biological Process	GO:0030879	mammary gland development	Sox9	IEP		Mouse	MGI:MGI:5284814\|PMID:12420222
Biological Process	GO:0030318	melanocyte differentiation	sox9b	IMP	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0097152	mesenchymal cell apoptotic process	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:24058167
Biological Process	GO:0010463	mesenchymal cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0010463	mesenchymal cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:0072289	metanephric nephron tubule formation	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:21212101
Biological Process	GO:0072170	metanephric tubule development	Sox9	IEP		Mouse	MGI:MGI:83252\|PMID:8787755
Biological Process	GO:0061138	morphogenesis of a branching epithelium	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3045749	Mouse	PMID:24924191
Biological Process	GO:0061138	morphogenesis of a branching epithelium	Sox9	IGI	MGI:MGI:98358	Mouse	PMID:24924191
Biological Process	GO:0061138	morphogenesis of a branching epithelium	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:21212101
Biological Process	GO:0043066	negative regulation of apoptotic process	SOX9	IMP		Human	PMID:21367821
Biological Process	GO:0043066	negative regulation of apoptotic process	Sox9	IMP		Mouse	MGI:MGI:4950303\|PMID:21367821
Biological Process	GO:0043066	negative regulation of apoptotic process	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2684317	Mouse	PMID:17267606
Biological Process	GO:0043066	negative regulation of apoptotic process	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3587654	Mouse	PMID:16085486
Biological Process	GO:1904864	negative regulation of beta-catenin-TCF complex assembly	Sox9	IMP		Mouse	MGI:MGI:3044231\|PMID:15132997
Biological Process	GO:0070168	negative regulation of biomineral tissue development	SOX9	IDA		Human	PMID:22110751
Biological Process	GO:0070168	negative regulation of biomineral tissue development	Sox9	IMP		Mouse	MGI:MGI:4947506\|PMID:20056916
Biological Process	GO:0030502	negative regulation of bone mineralization	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:11371614
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	Sox9	IMP		Mouse	MGI:MGI:3044231\|PMID:15132997
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	Sox9	IDA		Mouse	MGI:MGI:3768575\|PMID:17875931
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	Sox9	IDA		Mouse	PMID:17698607
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:0032331	negative regulation of chondrocyte differentiation	Sox9	IMP	MGI:MGI:2158693	Mouse	PMID:11371614
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	SOX9	IMP		Human	PMID:20651055
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Sox9	IMP		Mouse	MGI:MGI:4939090\|PMID:21212101
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Sox9	IDA		Mouse	PMID:12782625
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Sox9	IDA		Mouse	PMID:15778499
Biological Process	GO:0030857	negative regulation of epithelial cell differentiation	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:24058167
Biological Process	GO:0050680	negative regulation of epithelial cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3053819	Mouse	PMID:17698607
Biological Process	GO:0050680	negative regulation of epithelial cell proliferation	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17681175
Biological Process	GO:0046322	negative regulation of fatty acid oxidation	Sox9	IDA		Mouse	MGI:MGI:6414737\|PMID:32103177
Biological Process	GO:0010629	negative regulation of gene expression	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:24218621
Biological Process	GO:0002683	negative regulation of immune system process	Sox9	IMP		Mouse	MGI:MGI:4947506\|PMID:20056916
Biological Process	GO:2001054	negative regulation of mesenchymal cell apoptotic process	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:24058167
Biological Process	GO:1902894	negative regulation of miRNA transcription	SOX9	IDA		Human	PMID:26687115
Biological Process	GO:0045662	negative regulation of myoblast differentiation	Sox9	IDA		Mouse	PMID:12782625
Biological Process	GO:0030279	negative regulation of ossification	SOX9	IDA		Human	PMID:29503843
Biological Process	GO:0030279	negative regulation of ossification	Sox9	IMP		Mouse	MGI:MGI:4947506\|PMID:20056916
Biological Process	GO:0045668	negative regulation of osteoblast differentiation	Sox9	IDA		Mouse	MGI:MGI:6323929\|PMID:31121357
Biological Process	GO:0045668	negative regulation of osteoblast differentiation	Sox9	IMP		Mouse	MGI:MGI:5317468\|PMID:22421045
Biological Process	GO:0045668	negative regulation of osteoblast differentiation	Sox9	IDA		Mouse	MGI:MGI:6414737\|PMID:32103177
Biological Process	GO:0046533	negative regulation of photoreceptor cell differentiation	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19490914
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	SOX9	IDA		Human	PMID:29503843
Biological Process	GO:0014032	neural crest cell development	Sox9	IMP	MGI:MGI:3041881	Mouse	PMID:15691760
Biological Process	GO:0048665	neuron fate specification	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:12842915
Biological Process	GO:0007219	Notch signaling pathway	Sox9	IDA		Mouse	PMID:25446530
Biological Process	GO:0030903	notochord development	Sox9	IEP		Mouse	MGI:MGI:86312\|PMID:9119111
Biological Process	GO:0006334	nucleosome assembly	SOX9	IDA		Human	PMID:20484372
Biological Process	GO:0048709	oligodendrocyte differentiation	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17084361
Biological Process	GO:0048709	oligodendrocyte differentiation	sox9a	IMP	ZFIN:ZDB-GENO-980202-938	Zfish	PMID:20023158
Biological Process	GO:0001503	ossification	Sox9	IEP		Mouse	MGI:MGI:86312\|PMID:9119111
Biological Process	GO:0043049	otic placode formation	sox9a	IGI	ZFIN:ZDB-GENE-980526-280,ZFIN:ZDB-GENE-990415-50	Zfish	PMID:12668634
Biological Process	GO:0043049	otic placode formation	sox9b	IGI	ZFIN:ZDB-GENO-030219-2	Zfish	PMID:12668634
Biological Process	GO:0043049	otic placode formation	sox9b	IMP		Zfish	PMID:12668634
Biological Process	GO:0071599	otic vesicle development	Sox9	IEP		Mouse	MGI:MGI:86312\|PMID:9119111
Biological Process	GO:0030916	otic vesicle formation	Sox9	IMP	MGI:MGI:1932522,MGI:MGI:2385468	Mouse	PMID:18377888
Biological Process	GO:0030916	otic vesicle formation	sox9a	IGI	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:15689370
Biological Process	GO:0030916	otic vesicle formation	sox9b	IGI	ZFIN:ZDB-GENO-030219-2	Zfish	PMID:15689370
Biological Process	GO:0031016	pancreas development	sox9b	IMP	ZFIN:ZDB-GENO-120612-2	Zfish	PMID:22719264
Biological Process	GO:0031016	pancreas development	sox9b	IMP	ZFIN:ZDB-GENO-120612-2	Zfish	PMID:22537488
Biological Process	GO:0033339	pectoral fin development	sox9a	IMP		Zfish	PMID:9007245
Biological Process	GO:0090190	positive regulation of branching involved in ureteric bud morphogenesis	Sox9	IMP		Mouse	MGI:MGI:4939090\|PMID:21212101
Biological Process	GO:0061036	positive regulation of cartilage development	SOX9	IDA		Human	PMID:21401405
Biological Process	GO:0061036	positive regulation of cartilage development	SOX9	IDA		Human	PMID:29503843
Biological Process	GO:0061036	positive regulation of cartilage development	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:0008284	positive regulation of cell population proliferation	SOX9	IMP		Human	PMID:20651055
Biological Process	GO:0008284	positive regulation of cell population proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2684317	Mouse	PMID:17267606
Biological Process	GO:0008284	positive regulation of cell population proliferation	Sox9	IMP	MGI:MGI:2385469	Mouse	PMID:18723011
Biological Process	GO:2000138	positive regulation of cell proliferation involved in heart morphogenesis	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	SOX9	IMP		Human	PMID:20676705
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	SOX9	IDA		Human	PMID:21401405
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	Sox9	IMP		Mouse	MGI:MGI:4950303\|PMID:21367821
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	Sox9	IDA		Mouse	MGI:MGI:5285147\|PMID:20940257
Biological Process	GO:1902732	positive regulation of chondrocyte proliferation	SOX9	IDA		Human	PMID:29503843
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	SOX9	IDA		Human	PMID:10805756
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	SOX9	IMP		Human	PMID:20651055
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Sox9	IDA		Mouse	MGI:MGI:86312\|PMID:9119111
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Sox9	IDA		Mouse	PMID:15778499
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17084361
Biological Process	GO:0030858	positive regulation of epithelial cell differentiation	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:17681175
Biological Process	GO:0010634	positive regulation of epithelial cell migration	SOX9	IMP		Human	PMID:21512138
Biological Process	GO:0010634	positive regulation of epithelial cell migration	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0050679	positive regulation of epithelial cell proliferation	SOX9	IEP		Human	PMID:20103652
Biological Process	GO:0050679	positive regulation of epithelial cell proliferation	Sox9	IMP		Mouse	MGI:MGI:4421595\|PMID:20103652
Biological Process	GO:0050679	positive regulation of epithelial cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:1901203	positive regulation of extracellular matrix assembly	Sox9	IMP	MGI:MGI:2176205,MGI:MGI:2385468	Mouse	PMID:20881014
Biological Process	GO:0010628	positive regulation of gene expression	SOX9	IDA		Human	PMID:24681825
Biological Process	GO:0010628	positive regulation of gene expression	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19124014
Biological Process	GO:0010628	positive regulation of gene expression	Sox9	IDA		Rat	PMID:19828133\|RGD:8553796
Biological Process	GO:0090184	positive regulation of kidney development	Sox9	IGI	UniProtKB:Q04886	Mouse	MGI:MGI:4939090\|PMID:21212101
Biological Process	GO:2000020	positive regulation of male gonad development	SOX9	IDA		Human	PMID:21412441
Biological Process	GO:0002053	positive regulation of mesenchymal cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:0002053	positive regulation of mesenchymal cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:2000741	positive regulation of mesenchymal stem cell differentiation	SOX9	IDA		Human	PMID:21401405
Biological Process	GO:0014068	positive regulation of phosphatidylinositol 3-kinase signaling	Sox9	IMP		Mouse	MGI:MGI:4950303\|PMID:21367821
Biological Process	GO:0045732	positive regulation of protein catabolic process	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:0001934	positive regulation of protein phosphorylation	Sox9	IMP		Mouse	MGI:MGI:4950303\|PMID:21367821
Biological Process	GO:0001934	positive regulation of protein phosphorylation	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:2000648	positive regulation of stem cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:2000648	positive regulation of stem cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	SOX9	IDA		Human	PMID:20530484
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	SOX9	IDA		Human	PMID:22110751
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	SOX9	IDA		Human	PMID:8640233
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	MGI:MGI:5284779\|PMID:17525254
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IMP		Mouse	MGI:MGI:5285147\|PMID:20940257
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IGI	UniProtKB:Q01705	Mouse	MGI:MGI:6158746\|PMID:22110751
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:98367	Mouse	PMID:9755172
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:21757499
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:10825206
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:17644814
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:2443039	Mouse	PMID:21346191
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:9171829
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:98368	Mouse	PMID:9755172
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:12381733
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:1922863	Mouse	PMID:21427722
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:15590666
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:12732652
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:1914144	Mouse	PMID:21427722
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:21757499
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sox9	IDA		Rat	PMID:11875113\|RGD:1299273
Biological Process	GO:0003342	proepicardium development	sox9b	IMP	ZFIN:ZDB-MRPHLNO-050322-1	Zfish	PMID:23775563
Biological Process	GO:0003342	proepicardium development	sox9b	IMP	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:23775563
Biological Process	GO:0030850	prostate gland development	SOX9	IEP		Human	PMID:20103652
Biological Process	GO:0030850	prostate gland development	Sox9	IEP		Mouse	MGI:MGI:4421595\|PMID:20103652
Biological Process	GO:0060512	prostate gland morphogenesis	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3689997	Mouse	PMID:18325490
Biological Process	GO:0043491	protein kinase B signaling	Sox9	IMP		Mouse	MGI:MGI:4950303\|PMID:21367821
Biological Process	GO:0034504	protein localization to nucleus	Sox9	IDA		Mouse	PMID:21427722
Biological Process	GO:0006468	protein phosphorylation	Sox9	IDA		Mouse	PMID:19047045
Biological Process	GO:0065003	protein-containing complex assembly	SOX9	IDA		Human	PMID:20530484
Biological Process	GO:0031099	regeneration	sox9b	IMP	ZFIN:ZDB-GENO-151231-8	Zfish	PMID:24315993
Biological Process	GO:0061046	regulation of branching involved in lung morphogenesis	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0030155	regulation of cell adhesion	Sox9	IMP	MGI:MGI:1932522,MGI:MGI:2385468	Mouse	PMID:18377888
Biological Process	GO:0010564	regulation of cell cycle process	SOX9	IMP		Human	PMID:12420222
Biological Process	GO:0045595	regulation of cell differentiation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3053819	Mouse	PMID:17698607
Biological Process	GO:0042127	regulation of cell population proliferation	Sox9	IMP	MGI:MGI:2429649,MGI:MGI:3587654	Mouse	PMID:16085486
Biological Process	GO:0060784	regulation of cell proliferation involved in tissue homeostasis	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3053819	Mouse	PMID:17698607
Biological Process	GO:2000794	regulation of epithelial cell proliferation involved in lung morphogenesis	Sox9	IMP		Mouse	PMID:24191021
Biological Process	GO:0010468	regulation of gene expression	Sox9	IDA		Mouse	PMID:27325675
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:19796622
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:23840004
Biological Process	GO:0072034	renal vesicle induction	Sox9	IMP		Mouse	MGI:MGI:4939090\|PMID:21212101
Biological Process	GO:0070542	response to fatty acid	Sox9	IDA		Mouse	MGI:MGI:6414737\|PMID:32103177
Biological Process	GO:0014070	response to organic cyclic compound	Sox9	IEP		Rat	PMID:30599193\|RGD:151893501
Biological Process	GO:0060041	retina development in camera-type eye	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19490914
Biological Process	GO:0060041	retina development in camera-type eye	sox9b	IMP	ZFIN:ZDB-GENO-081106-1	Zfish	PMID:19210963
Biological Process	GO:0060221	retinal rod cell differentiation	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19490914
Biological Process	GO:0060021	roof of mouth development	sox9b	IMP	ZFIN:ZDB-GENO-100428-3	Zfish	PMID:22052544
Biological Process	GO:0060009	Sertoli cell development	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19124014
Biological Process	GO:0060009	Sertoli cell development	Sox9	IEP		Rat	PMID:11875113\|RGD:1299273
Biological Process	GO:0060008	Sertoli cell differentiation	Sox9	IMP	MGI:MGI:3041881	Mouse	PMID:15056615
Biological Process	GO:0060008	Sertoli cell differentiation	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:15056615
Biological Process	GO:0007165	signal transduction	Sox9	IMP		Mouse	MGI:MGI:4939090\|PMID:21212101
Biological Process	GO:0001501	skeletal system development	SOX9	IMP		Human	PMID:8640233
Biological Process	GO:0035019	somatic stem cell population maintenance	Sox9	IMP	MGI:MGI:2176173,MGI:MGI:2429649	Mouse	PMID:20871603
Biological Process	GO:0007283	spermatogenesis	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:19124014
Biological Process	GO:0072089	stem cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:3841145	Mouse	PMID:20346939
Biological Process	GO:0072089	stem cell proliferation	Sox9	IMP	MGI:MGI:2385468,MGI:MGI:2450311	Mouse	PMID:17350610
Biological Process	GO:0001894	tissue homeostasis	Sox9	IMP		Mouse	MGI:MGI:4947506\|PMID:20056916
Biological Process	GO:0060534	trachea cartilage development	Sox9	IMP	MGI:MGI:2429649	Mouse	PMID:24218621
Biological Process	GO:0006366	transcription by RNA polymerase II	Sox9	IDA		Mouse	PMID:17644814
Biological Process	GO:0006366	transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:1922863	Mouse	PMID:21427722
Biological Process	GO:0006366	transcription by RNA polymerase II	Sox9	IGI	MGI:MGI:1914144	Mouse	PMID:21427722
Biological Process	GO:0003309	type B pancreatic cell differentiation	sox9b	IMP	ZFIN:ZDB-GENO-161220-13	Zfish	PMID:27565026
Biological Process	GO:0060509	type I pneumocyte differentiation	Sox9	IMP	MGI:MGI:2385468	Mouse	PMID:24058167
Biological Process	GO:0072189	ureter development	Sox9	IGI	MGI:MGI:1923615	Mouse	PMID:20881014
Biological Process	GO:0072197	ureter morphogenesis	Sox9	IGI	MGI:MGI:98370	Mouse	PMID:21212101
Biological Process	GO:0072193	ureter smooth muscle cell differentiation	Sox9	IMP	MGI:MGI:2176205,MGI:MGI:2385468	Mouse	PMID:20881014
Biological Process	GO:0072190	ureter urothelium development	Sox9	IEP		Mouse	MGI:MGI:5285125\|PMID:21512138
Biological Process	GO:0061032	visceral serous pericardium development	sox9b	IMP	ZFIN:ZDB-MRPHLNO-050322-1	Zfish	PMID:23775563
Biological Process	GO:0061032	visceral serous pericardium development	sox9b	IMP	ZFIN:ZDB-GENO-050322-1	Zfish	PMID:23775563

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 05/14/2024 MGI 6.23

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.