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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Chd7+
wild type
MGI:3051254
Summary 49 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Chd7Gt(S20-7E1)Sor/Chd7+ 129S1.129S4(B6)-Chd7Gt(S20-7E1)Sor MGI:7493591
ht2
Chd7tm2a(EUCOMM)Wtsi/Chd7+ 129S5;B6N-Chd7tm2a(EUCOMM)Wtsi/Wtsi MGI:5781596
ht3
Chd7Gt(S20-7E1)Sor/Chd7+ B6;129S-Chd7Gt(S20-7E1)Sor/DmmJ MGI:7397298
ht4
Chd7Looper/Chd7+ BALB/c-Chd7Looper MGI:6281675
ht5
Chd7Trooper/Chd7+ BALB/c-Chd7Trooper MGI:7493334
ht6
Chd7Flo/Chd7+ C3HeB/FeJ-Chd7Flo MGI:3511743
ht7
Chd7Whi/Chd7+ C3HeB/FeJ-Chd7Whi MGI:3589435
ht8
Chd7Gt(XK403)Byg/Chd7+ either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1) MGI:4410380
ht9
Chd7Gt(S20-7E1)Sor/Chd7+ either: (involves: 129S4/SvJae * C57BL/6J) or (involves: 129S1/SvImJ * 129S4/SvJae C57BL/6J) MGI:3719118
ht10
Chd7Gt(XK403)Byg/Chd7+ involves: 129P2/OlaHsd * C57BL/6 MGI:4410358
ht11
Chd7Gt(RRR136)Byg/Chd7+ involves: 129P2/OlaHsd * C57BL/6 MGI:4410356
ht12
Chd7Gt(XK403)Byg/Chd7+ involves: 129P2/OlaHsd * C57BL/6 * DBA/2 MGI:7488670
ht13
Chd7Gt(XK403)Byg/Chd7+ involves: 129P2/OlaHsd * C57BL/6J MGI:7506303
ht14
Chd7Gt(S20-7E1)Sor/Chd7+ involves: 129S1/SvImJ * 129S4/SvJae MGI:7496091
ht15
Chd7Gt(S20-7E1)Sor/Chd7+ involves: 129S1/SvImJ * 129S4/SvJae * C57BL/6J MGI:3708350
ht16
Chd7Gt(S20-7E1)Sor/Chd7+ involves: 129S1/SvImJ * 129S4/SvJae * C57BL/6J * DBA/2J MGI:7496044
ht17
Chd7Gt(S20-7E1)Sor/Chd7+ involves: 129S4/SvJaeSor MGI:4835277
ht18
Chd7Gt(S20-7E1)Sor/Chd7+ involves: 129S4/SvJaeSor * C57BL/6J MGI:5807347
ht19
Chd7tm2a(EUCOMM)Wtsi/Chd7+ involves: 129S5/SvEvBrd * C57BL/6N MGI:7492422
ht20
Chd7tm2a(EUCOMM)Wtsi/Chd7+ involves: 129S6/SvEvTac * C57BL/6N MGI:5559523
ht21
Chd7Todo/Chd7+ involves: BALB/cAnNCrl * C3H/HeN MGI:2174776
ht22
Chd7Ome/Chd7+ involves: BALB/cByJ * C57BL/6J MGI:5437367
ht23
Chd7Obt/Chd7+ involves: BALB/c * C3H/HeN MGI:2684768
ht24
Chd7Cycn/Chd7+ involves: BALB/c * C3H/HeN MGI:2684757
ht25
Chd7Edy/Chd7+ involves: BALB/c * C3H/HeN MGI:2684771
ht26
Chd7Dz/Chd7+ involves: BALB/c * C3H/HeN MGI:2684749
ht27
Chd7Lda/Chd7+ involves: BALB/c * C3H/HeN MGI:2177302
ht28
Chd7Mt/Chd7+ involves: BALB/c * C3H/HeN MGI:2177301
ht29
Chd7Looper/Chd7+ involves: BALB/c * C57BL/6 MGI:6281682
ht30
Chd7Flo/Chd7+ involves: C3HeB/FeJ MGI:3616772
ht31
Chd7Whi/Chd7+ involves: C3HeB/FeJ MGI:3616771
ht32
Chd7Coa1/Chd7+ involves: C57BL/6J MGI:5436060
cn33
Chd7Whi/Chd7+ B6.C3Fe-Chd7Whi MGI:4410366
cn34
Chd7Gt(XK403)Byg/Chd7+
H2az2Tg(Wnt1-cre)11Rth/H2az2+
either: (involves: 129P2/OlaHsd * C57BL/6 * C57BL/6J * CBA/J) or (involves: 129P2/OlaHsd * C57BL/6J * CBA/J * CD-1) MGI:4410359
cn35
Chd7Gt(XK403)Byg/Chd7+
Mesp1tm2(cre)Ysa/Mesp1+
either: (involves: 129P2/OlaHsd * C57BL/6 * CBA) or (involves: 129P2/OlaHsd * C57BL/6 * CBA * CD-1) MGI:4410361
cn36
Chd7Gt(XK403)Byg/Chd7+
Tfap2atm1(cre)Moon/Tfap2a+
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1) MGI:4410362
cn37
Chd7Gt(XK403)Byg/Chd7+
Tg(Tbx1-cre)1Joe/0
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1) MGI:4410360
cn38
Chd7tm1.1Dmm/Chd7+
Foxg1tm1(cre)Skm/Foxg1+
involves: 129 * C57BL/6 * Swiss Webster MGI:4835273
cn39
Chd7tm1.1Dmm/Chd7+
Tg(rx3-icre)1Mjam/0
involves: 129S6/SvEvTac MGI:5774943
cn40
Chd7tm2c(EUCOMM)Wtsi/Chd7+
Tg(Atoh1-cre)1Bfri/0
involves: C57BL/6 * C57BL/6J * C57BL/6N * CBA MGI:7518227
cn41
Chd7tm2c(EUCOMM)Wtsi/Chd7+
Tg(Neurod1-cre)RZ24Gsat/0
involves: C57BL/6J * C57BL/6N * FVB/NTac MGI:7518243
cx42
Chd7Whi/Chd7+
Tbx1tm1Bld/Tbx1+
B6.Cg-Chd7Whi Tbx1tm1Bld MGI:4410367
cx43
Chd7Whi/Chd7+
Fgfr1Hspy/Fgfr1+
C3HeB/FeJ-Chd7Whi Fgfr1Hspy MGI:7491994
cx44
Chd7Gt(XK403)Byg/Chd7+
Tbx1tm1Bld/Tbx1+
either: (involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6) or (involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6 * CD-1) MGI:4410364
cx45
Chd7Gt(XK403)Byg/Chd7+
Fgf8tm1.2Mrt/Fgf8+
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1) MGI:4410379
cx46
Chd7Gt(XK403)Byg/Chd7+
Fgf8tm2Mrt/Fgf8+
involves: 129 * 129P2/OlaHsd * C57BL/6J * DBA/2J MGI:7506305
cx47
Aldh1a3tm1Gdu/Aldh1a3tm1Gdu
Chd7Gt(S20-7E1)Sor/Chd7+
involves: 129S4/SvJaeSor * C57BL/6 * C57BL/6J MGI:7506323
cx48
Aldh1a3tm1Gdu/Aldh1a3+
Chd7Gt(S20-7E1)Sor/Chd7+
involves: 129S4/SvJaeSor * C57BL/6 * C57BL/6J MGI:7506322
cx49
Chd7Gt(S20-7E1)Sor/Chd7+
Arb2aTg(Tyr)TpNpln/Arb2a+
involves: 129S4/SvJaeSor * C57BL/6 * FVB/N MGI:7429212


Genotype
MGI:7493591
ht1
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
129S1.129S4(B6)-Chd7Gt(S20-7E1)Sor
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• female mice exhibit delayed puberty
• vaginal opening is significantly delayed and occurs an average of 5 days later than in wild-type females (P32 versus P27)
• however, vaginal opening occurs at a body size of ~15 gm, similar to wild-type females
• female mice never achieve cyclicity and exhibit highly erratic estrus cycles, with no apparent pattern of timing or duration of cycle stages
• female mice achieve first estrus on P43, that is, 10 days later than wild-type females (P33)
• females have first estrus at a body size of ~15 gm, whereas wild-type females have first estrus at ~18 gm

taste/olfaction
• 10% decrease in the number of basal cells
• cilia markers are consistently patchy indicating regional decreases in cilia components
• patchy distribution is confirmed by SEM
• the normal arrangement in parallel stacked columns in the epithelium is lost
• 30% reduction in number
• E10.5 embryos show a 49% reduction in phospho-histone H3-positive proliferating cells in the olfactory placode relative to wild-type controls
• embryos exhibit a significant reduction in TUNEL-positive cells in the nasal region relative to wild-type embryos at E10.5 (-21%), E11.5 (-11%) and E12.5 (-13%]
• expression levels of Otx2, Bmp4 and Fgfr1 (involved in proliferation and/or neurogenesis) are significantly decreased in the olfactory placode at E10.5
• however, the size of the E10.5 olfactory placode is normal and invagination of the olfactory placode to form the olfactory pit appears unaffected
• 50% reduction in proliferating basal cells in adults
• 4 and 8 weeks after chemical ablation neuronal regeneration is impaired or delayed
• little to no response to 6 different odorants (amyl acetate, octanal, haptaldehyde, hexanal, eugenol, and carvone) tested by electro-olfactogram

nervous system
• GnRH neurogenesis is impaired resulting in reduced GnRH neurons in embryos and adult mice
• the normal arrangement in parallel stacked columns in the epithelium is lost
• 30% reduction in number
• both adult male and female mice show a 35% reduction in the total number of GnRH-positive neuron cell bodies in the hypothalamus relative to wild-type controls
• embryos show a 30% reduction in the total number of GnRH-positive neurons in the nasal region at E11.5 and E12.5, consistent with fewer GnRH neurons in the adult hypothalamus
• however, GnRH neurons show normal distribution throughout the rostral-caudal axis from the nasal region to the cerebellum, suggesting normal GnRH neuronal migration
• adult male and female mice show, respectively, a 51% and 54% reduction in anti-GnRH immunofluorescence in the median eminence
• however, immunofluorescence of arginine vasopressin (AVP)-positive fibers in the median eminence is normal
• expression levels of Gnrhr (gonadotropin releasing hormone receptor) are significantly reduced in the adult pituitary gland
• decreased length
• decreased length but not width
• however, intact OMP-positive olfactory bulb glomeruli are present
• expression levels of Gnrh1 (gonadotropin releasing hormone 1) and Otx2 (orthodenticle homeobox 2) are significantly reduced in the adult hypothalamus
• reduced olfactory interneuron activity
• 4 and 8 weeks after chemical ablation neuronal regeneration is impaired or delayed

homeostasis/metabolism
N
• both male and female mice show normal serum levels of growth hormone (GH) and insulin-like growth factor I (IGF1) relative to wild-type controls
• 2 h after administration of leuprolide, a GnRH agonist, both male and female mice show a normal increase in serum levels of LH and FSH relative to similarly treated wild-type controls
• female mice show normal serum levels of insulin and leptin relative to wild-type females
• 2 h after administration of antide, a gonadotropin-releasing hormone (GnRH) antagonist, male mice show a normal decrease in serum levels of LH and FSH relative to similarly treated wild-type controls
• at late estrus, 3-4-month-old female mice show an 83% reduction in serum FSH levels relative to wild-type controls
• in contrast, male mice show normal serum FSH levels
• at late estrus, 3-4-month-old female mice show a 74% reduction in serum LH levels relative to wild-type controls
• male mice show an 86% reduction in serum LH levels relative to wild-type controls

cellular
• cilia markers are consistently patchy indicating regional decreases in cilia components
• patchy distribution is confirmed by SEM
• embryos exhibit a significant reduction in TUNEL-positive cells in the nasal region relative to wild-type embryos at E10.5 (-21%), E11.5 (-11%) and E12.5 (-13%]
• GnRH neurogenesis is impaired resulting in reduced GnRH neurons in embryos and adult mice
• E10.5 embryos show a 49% reduction in phospho-histone H3-positive proliferating cells in the olfactory placode relative to wild-type controls

endocrine/exocrine glands
N
• mice show normal pituitary gland histology at E10.5, E14.5, E18.5 and in adulthood
• both adult male and female mice show a 35% reduction in the total number of GnRH-positive neuron cell bodies in the hypothalamus relative to wild-type controls
• embryos show a 30% reduction in the total number of GnRH-positive neurons in the nasal region at E11.5 and E12.5, consistent with fewer GnRH neurons in the adult hypothalamus
• however, GnRH neurons show normal distribution throughout the rostral-caudal axis from the nasal region to the cerebellum, suggesting normal GnRH neuronal migration
• adult male and female mice show, respectively, a 51% and 54% reduction in anti-GnRH immunofluorescence in the median eminence
• however, immunofluorescence of arginine vasopressin (AVP)-positive fibers in the median eminence is normal
• expression levels of Gnrhr (gonadotropin releasing hormone receptor) are significantly reduced in the adult pituitary gland

growth/size/body
• 10% decrease in the number of basal cells
• cilia markers are consistently patchy indicating regional decreases in cilia components
• patchy distribution is confirmed by SEM
• the normal arrangement in parallel stacked columns in the epithelium is lost
• 30% reduction in number
• both male and female mice are significantly smaller than wild-type controls

respiratory system
• 10% decrease in the number of basal cells
• cilia markers are consistently patchy indicating regional decreases in cilia components
• patchy distribution is confirmed by SEM
• the normal arrangement in parallel stacked columns in the epithelium is lost
• 30% reduction in number
• 50% reduction in proliferating basal cells in adults
• 4 and 8 weeks after chemical ablation neuronal regeneration is impaired or delayed

craniofacial
• 10% decrease in the number of basal cells
• cilia markers are consistently patchy indicating regional decreases in cilia components
• patchy distribution is confirmed by SEM
• the normal arrangement in parallel stacked columns in the epithelium is lost
• 30% reduction in number

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:148116 , J:174086




Genotype
MGI:5781596
ht2
Allelic
Composition
Chd7tm2a(EUCOMM)Wtsi/Chd7+
Genetic
Background
129S5;B6N-Chd7tm2a(EUCOMM)Wtsi/Wtsi
Cell Lines EPD0019_1_D07
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm2a(EUCOMM)Wtsi mutation (1 available); any Chd7 mutation (134 available)
Data Sources
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
IMPC - WTSI
IMPC - WTSI

skeleton

growth/size/body




Genotype
MGI:7397298
ht3
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
B6;129S-Chd7Gt(S20-7E1)Sor/DmmJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• highly penetrant semicircular abnormalities at E14.5 primarily affecting the lateral and posterior canals

vision/eye
• 40% reduction in the number of cones at P15
• reduced length at P15
• shorter outer segments at P15
• however, there is no detectable difference in rod density

nervous system
• 40% reduction in the number of cones at P15
• reduced length at P15
• shorter outer segments at P15
• however, there is no detectable difference in rod density




Genotype
MGI:6281675
ht4
Allelic
Composition
Chd7Looper/Chd7+
Genetic
Background
BALB/c-Chd7Looper
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Looper mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• mice exhibit a longer latency to fall from a rotating rod
• however, they show normal digigait test results, indicating that directional control, but not motor coordination, is impaired
• mice startle less than wild-type littermates in response to mixed frequency noise
• mice spend more time moving than controls during locomotor cell testing, indicating hyperactivity
• on average, mice run twice as quickly and travel twice as far as controls
• mice exhibit circling behavior
• mice are inclined to circle within the center of the test arena compared to controls that prefer the edges
• during the swim test, mice swim in circles compared to controls that occasionally float motionless or seek refuge at the outskirts of the test arena

craniofacial
• stapes shows an ectopic bone bridge extending from the tubercle to the otic capsule
• fusion of the stapedial footplate to the oval window of the cochlea
• ossicles show a range of malformations
• however, mid-modiolar cochlea sections are normal
• the incus shows malformation of the facet
• the incus shows incomplete development of the long process
• the incus shows incomplete development of the short process
• the malleus manubrium protrudes at an abnormally acute angle while the neck is thickened and malformed
• stapes is rounded and small with an ectopic bone bridge extending from the tubercle to the otic capsule
• fusion of the stapedial footplate to the oval window of the cochlea

growth/size/body
• mice are 30% lighter than controls

hearing/vestibular/ear
• stapes shows an ectopic bone bridge extending from the tubercle to the otic capsule
• fusion of the stapedial footplate to the oval window of the cochlea
• ossicles show a range of malformations
• however, mid-modiolar cochlea sections are normal
• the incus shows malformation of the facet
• the incus shows incomplete development of the long process
• the incus shows incomplete development of the short process
• the malleus manubrium protrudes at an abnormally acute angle while the neck is thickened and malformed
• stapes is rounded and small with an ectopic bone bridge extending from the tubercle to the otic capsule
• fusion of the stapedial footplate to the oval window of the cochlea
• incomplete development of the lateral semicircular canal
• various degrees of hypoplasia of the posterior canal
• various degrees of hypoplasia of the anterior canal
• auditory brainstem response (ABR) thresholds are elevated between 4 and 32 kHz
• Background Sensitivity: the average click ABR threshold is higher on the BALB/c background than on a mixed C57BL/6 and BALB/c background
• mice exhibit hearing loss

homeostasis/metabolism

immune system
• 11 of 16 mice show eye irritation and blepharoconjunctivitis
• 11 of 16 mice show eye irritation and blepharoconjunctivitis

skeleton
• stapes shows an ectopic bone bridge extending from the tubercle to the otic capsule
• fusion of the stapedial footplate to the oval window of the cochlea
• ossicles show a range of malformations
• however, mid-modiolar cochlea sections are normal
• the incus shows malformation of the facet
• the incus shows incomplete development of the long process
• the incus shows incomplete development of the short process
• the malleus manubrium protrudes at an abnormally acute angle while the neck is thickened and malformed
• stapes is rounded and small with an ectopic bone bridge extending from the tubercle to the otic capsule
• fusion of the stapedial footplate to the oval window of the cochlea
• incus shows deformed glenoid cavity

vision/eye
• 11 of 16 mice show eye irritation and blepharoconjunctivitis
• 11 of 16 mice show eye irritation and blepharoconjunctivitis
• mice exhibit variable, narrowed palpebral fissures and lid edema, often with one eye severely affected and one moderately affected or normal eye
• however, coloboma is not seen

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:252089




Genotype
MGI:7493334
ht5
Allelic
Composition
Chd7Trooper/Chd7+
Genetic
Background
BALB/c-Chd7Trooper
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Trooper mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• in 4% of mice

immune system
• blepharoconjunctivitis in 12% (6 of 52) of mice
• blepharoconjunctivitis in 12% (6 of 52) of mice

hearing/vestibular/ear
• in non-circling mice, the stapes footplate is deformed and does not contact the oval window
• in circling mice, the footplate fuses to the oval window
• small, rounded shape in mice showing circling behavior
• intersection of the posterior and superior canals is enlarged and misshapen
• variable levels of hypoplasia
• variable levels of hypoplasia
• thresholds are elevated between 4 and 16 kHz, with the greatest shifts seen at lower frequencies
• average threshold shifts of 35-40 dB SPL at 4 and 8 kHz
• average threshold shifts of 20 dB SPL at 16 kHz

vision/eye
• blepharoconjunctivitis in 12% (6 of 52) of mice
• blepharoconjunctivitis in 12% (6 of 52) of mice

growth/size/body

craniofacial
• in non-circling mice, the stapes footplate is deformed and does not contact the oval window
• in circling mice, the footplate fuses to the oval window
• small, rounded shape in mice showing circling behavior

skeleton
• in non-circling mice, the stapes footplate is deformed and does not contact the oval window
• in circling mice, the footplate fuses to the oval window
• small, rounded shape in mice showing circling behavior

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:262283




Genotype
MGI:3511743
ht6
Allelic
Composition
Chd7Flo/Chd7+
Genetic
Background
C3HeB/FeJ-Chd7Flo
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Flo mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• mutants showed a delay in resuming upright position
• when picked up by the tail and lowered toward a surface, mutants had an abnormal reaching response consisting of curling toward the abdomen
• mutants circled on average 70 times in 10 min compared to 0 times in wild-type without apparent deafness

hearing/vestibular/ear
• various degrees of abnormalities (from small to completely obliterated) of the round window
• mutants exhibited a more square-shaped stapes than wild-type mice
• mutants exhibited a smaller stapes footplate than wild-type mice
• 2 out of 6 adult mutants had four rows of outer hair cells at the extreme apex of the cochlea and P1 mutants showed larger numbers of outer hair cells in the apical region
• various degrees of abnormality, ranging from constriction of the canal to complete truncation

skeleton
• various degrees of abnormalities (from small to completely obliterated) of the round window
• mutants exhibited a more square-shaped stapes than wild-type mice
• mutants exhibited a smaller stapes footplate than wild-type mice

nervous system
• 2 out of 6 adult mutants had four rows of outer hair cells at the extreme apex of the cochlea and P1 mutants showed larger numbers of outer hair cells in the apical region

craniofacial
• various degrees of abnormalities (from small to completely obliterated) of the round window
• mutants exhibited a more square-shaped stapes than wild-type mice
• mutants exhibited a smaller stapes footplate than wild-type mice




Genotype
MGI:3589435
ht7
Allelic
Composition
Chd7Whi/Chd7+
Genetic
Background
C3HeB/FeJ-Chd7Whi
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Whi mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• show a trend toward reduced response
• increase in the number of squares crossed in a modified SHIRPA
• increase in activity in both the periphery and center of an open field
• 47% increase in response latency

hearing/vestibular/ear
N
• positive Preyer reflex to clickbox indicates heterozygotes are not profoundly deaf
• malleus and incus appear normal
• the round window is smaller or entirely absent
• the shape of the stapes varies greatly and is only occassionally normal
• additional inner hair cells are found
• patches of an extra row of outer hair cells are frequent
• incomplete expressivity such that some inner ears lack semicircular canal whereas it is truncated in others
• majority of heterozygotes have truncated lateral semicircular canal rather than complete absence and ampulla is present
• thinning of the superior canal is occassionally seen but no truncation

growth/size/body
• decreased by 30%
• decreased by 16%
• both male and female adult mice exhibited a significantly lower body weight than wild-type controls (J:161880)
• decreased weight from early life to adulthood (J:330596)
• at 14 weeks of age

vision/eye
N
• no eye abnormalities are seen

homeostasis/metabolism
• show a trend toward reduced response
• increased blood urea levels
• decreased fasted insulin level
• decreased HDL and LDL levels
• glucose tolerance on average is similar to controls but has a binomial distribution with two groups (high and low responders) identified

immune system
• tends to be increased but not statistically significant

nervous system
• adult females showed slightly reduced numbers of hypothalamic GnRH1 neurons
• however, no difference in GnRH1 neuron density is noted at E16.5
• adult females showed a slightly reduced gonadotropin-releasing hormone (GnRH1) neuron density in the median eminence relative to wild-type controls
• additional inner hair cells are found
• patches of an extra row of outer hair cells are frequent
• severely enlarged third dorsal ventricle
• absence of midline crossing resulting in dysgenesis of the corpus callosum in one of 3 mice
• abnormally shaped
• 2 of 23 adult mice had abnormal olfactory bulbs; one olfactory bulb consisted of two parts while a second one showed asymmetrical hypoplasia
• however, the layered organization of the adult olfactory bulb was normal and no morphological abnormalities were noted in the olfactory epithelia or olfactory bulbs at E16.5
• adult mice exhibited a slightly decreased olfactory bulb/brain length ratio relative to wild-type controls
• 1 of 23 adult mice exhibited mild asymmetrical olfactory bulb hypoplasia

hematopoietic system
• tends to be increased but not statistically significant

reproductive system
• mean testis weight of adult males was significantly lower than in wild-type controls
• however, most males showed a significantly increased testis weight/body weight ratio (gonadosomatic index, GSI) due to a lower body weight
• 2 of 12 adult males exhibited severely hypoplastic testes with a reduced gonadosomatic index (GSI)
• all (9 of 9) adult females had abnormal uteri
• most uteri were shorter and wider than in wild-type controls
• however, the combined weights of the uteri and ovaries were relatively normal
• a cyst in one uterine horn and one unilateral hypoplastic uterine horn were identified
• wider than normal uterine horns were observed
• number of days required to produce the first litter was significantly greater in both male and female mice than in wild-type controls
• however, the % of heterozygous x wild-type matings that did not produce a litter after 2 months was not different from that of wild-type x wild-type matings

taste/olfaction
• although mice showed an increased response to BALB/c urine compared with water, the response was significantly lower than in wild-type controls, as determined by the mean number of sniff bouts and their cumulative duration
• number of mice that did not explore the urine (non-responders) was greater (5 of 21) than in wild-type controls (1 of 19)
• poorer performance in smell test may be secondary to olfactory dysfunction or to balance disturbances

adipose tissue
• decreased by 30%

endocrine/exocrine glands
• adult females showed slightly reduced numbers of hypothalamic GnRH1 neurons
• however, no difference in GnRH1 neuron density is noted at E16.5
• adult females showed a slightly reduced gonadotropin-releasing hormone (GnRH1) neuron density in the median eminence relative to wild-type controls
• mean testis weight of adult males was significantly lower than in wild-type controls
• however, most males showed a significantly increased testis weight/body weight ratio (gonadosomatic index, GSI) due to a lower body weight
• 2 of 12 adult males exhibited severely hypoplastic testes with a reduced gonadosomatic index (GSI)

craniofacial
• the round window is smaller or entirely absent
• the shape of the stapes varies greatly and is only occassionally normal

skeleton
• the round window is smaller or entirely absent
• the shape of the stapes varies greatly and is only occassionally normal

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:330596




Genotype
MGI:4410380
ht8
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Genetic
Background
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
cardiovascular system

craniofacial

embryo




Genotype
MGI:3719118
ht9
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
either: (involves: 129S4/SvJae * C57BL/6J) or (involves: 129S1/SvImJ * 129S4/SvJae C57BL/6J)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at 3 weeks to 11 months, heterozygotes exhibit variable asymmetric defects in posterior and lateral semicircular canals
• in contrast, the anterior semicircular canal and corresponding ampulla and crista remain normal in all heterozygotes
• notably, the utricle and saccule are present in all heterozygous ears, with no differences in shape, hair cell morphology, macular innervation or otoconia relative to wild-type ears
• at 3 weeks to 11 months, 42 of 50 heterozygous ears display a short common crus
• in the remaning 8 ears (where a distinct PSCC is absent), the area of the common crus either forms a widened bony cavity which contains a patulous common epithelial lumen (6 of 8) or appears as a cavity of normal width, which is associated with a small truncated out-pouching from the superior end in place of a normal PSCC (2 of 8)
• at 3 weeks to 11 months, all heterozygotes exhibit morphological changes in the lateral canal (LSCC), ranging from a mild alteration in canal shape to total truncation; 14 of 25 heterozygotes display similar, but not identical, defects of the LSCC between ears, and 11 of 25 show different malformation of the LSCC between ears
• although the lateral ampulla is present in most heterozygous ears, 4 of 50 ears show absence of both the ampulla and corresponding cristae; of these four, the LSCC formed a complete but smaller loop in one ear, a bird-beak in another ear, and was truncated in the remaining two ears
• none of the heterozygotes are missing the lateral ampulla in both ears
• variability is noted between different heterozygotes as well as between the right and left ear of the same mouse; of the 13 mice with at least one loop malformation of the LSCC, 5 had bilateral loops, 6 had a bird-beak deformity of the contralateral canal, and 2 had a contralateral LSCC truncation
• variability in loop size is often observed between the ears of mice with bilateral loops; of 12 heterozygotes with at least one LSCC truncation, 7 had bilateral truncations, 3 had a contralateral bird-beak, and 2 had a contralateral loop
• only 2 of the 11 heterozygotes with at least one beak had bilateral beaks; the site and extent of narrowing is variable between the ears of those mice with bilateral peaks
• the extent of LSCC truncation is also variable between ears in some mice
• intra-mouse variability is greater for the beak morphology than for the loop and truncated LSCCs
• at 3 weeks to 11 months, 19 of 50 heterozygous ears exhibit complete truncation of the non-ampullated end of the LSCC, with canal length varying from >50% of the expected circumference to no more than a tiny bud off the ampulla
• in others, LSCCs appear as complete patent loops of reduced diameter, resulting in a more circular morphology (18 of 50 ears), with significant variability noted in the diameter of the arc of the canal and of the canal lumen
• some LSCCs, display a point of luminal narrowing along their arcs which resembles a bird's beak (13 of 50 ears), most commonly found at the non-ampullated end of the canal
• this constriction is mild in some cases, but in others, the connection between the non-ampullated end and the vestibule is narrow
• at 3 weeks to 11 months, 42 of 50 heterozygotes display a complete but dysplastic posterior semicircular canal (PSCC) of a more circular "D" shape resulting from a reduced arc diameter, wider canal lumen, and a shorter common crus
• in a few ears, the superior aspect of the PSCC joins the vertical portion of the anterior semicircular canal farther along it course, resulting in an even smaller canal arc
• the size and shape of PSCC is often variable between ears of the same mouse and is bilaterally absent in only 1 of the 7 mice with absence of a distinct PSCC
• however, the posterior crista is always present within the bony posterior ampulla, regardless of whether a distinct PSCC is present
• 8 of 50 ears in 7 of 25 heterozygotes lack a distinct PSCC; only one of these 7 mice shows bilateral absence of the PSCC
• although the lateral ampulla is present in most heterozygous ears, 4 of 50 ears show absence of both the ampulla and corresponding cristae
• when present, lateral cristae show normal shape, surface morphology and neurofilament staining pattern relative to wild-type cristae; however, the width of lateral cristae is smaller in some ears
• in contrast, all anterior cristae display a normal surface morphology and innervation pattern relative to wild-type cristae
• although posterior cristae are present in all 26 heterozygous ears studied, they show morphological and/or innervation defects
• no lateral sensory epithelium is found in the 4 heterozygous ears lacking a lateral ampulla
• posterior cristae exhibit morphological ranging from a reduction in the surface area of the saddle-shaped sensory epithelium to a flattening of the saddle into a round, patch-like epithelium in all 26 ears studied
• the posterior spetum cruciatum was normal in 3 (of 26) ears and was absent in 2 ears, both of which showed a small patch-like epithelium; the other 21 had a small area devoid of stereocilia at the edge of the sensory epithelium, resembling a rudimentary septum cruciatum, located at the center of the crista
• at 3 weeks to 11 months, heterozygotes display defects in vestibular sensory epithelial innervation despite the presence of intact hair cells in target organs

nervous system
• at 3 weeks to 11 months, heterozygotes display defects in vestibular sensory epithelial innervation despite the presence of intact hair cells in target organs
• at 3 weeks to 11 months, the vestibular nerve bundle entering the lateral cristae is visibly smaller in some ears, independent of the degree of severity of lateral canal dysplasia

behavior/neurological
• 9 of 25 heterozygotes display rapid bi-directional circling during much of their walking hours, although they do stop to eat, rest and mate
• all 9 circling mice display severe bilateral lateral canal defects (truncation or bird-beak defects on each side)
• only 3 mice with such severe bilateral lateral canal defects do not cicle, whereas all 13 mice with the less severe loop defects in at least one ear are non-ciclers
• no cicling mouse is found to have a completely patent lateral semicircular canal
• of the 18 heterozygotes with complete bilateral posterior canals, 6 circle and 12 do not
• of the 6 heterozygotes in which one posterior canal is missing while the contralateral posterior canal is intact, 2 circle and 4 do not
• 6 of 9 circlers and 12 of 18 non-circlers have both posterior canals present
• circling behavior is stronly correlated with lateral canal morphology

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:123608




Genotype
MGI:4410358
ht10
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Pharyngeal arch artery patterning defects in Chd7Whi/Chd7+, Chd7Gt(XK403)Byg/Chd7+ and Chd7Gt(XK403)Byg/Chd7+ Tbx1tm1Bld/Tbx1+ embryos

mortality/aging
• fewer than expected mice survive

cardiovascular system
• in 54% of mice at E10.5
• in 46% of mice at E10.5 (23% left and 38% right)
• 8% of mice exhibit defects in the left sixth branchial arch artery unlike wild-type mice
• 2% of mice exhibit defects in the right pulmonary trunk defect
• at E14.5, 4% of mice exhibit type B interrupted aortic arches unlike wild-type mice
• at E14.5, 2% of mice exhibit cervical arch or B-segment coarcation unlike wild-type mice
• at E14.5, 16% of mice exhibit aberrant right subclavian artery unlike wild-type mice
• 28% of mice exhibit abnormal great vessels unlike wild-type mice

nervous system
• the vagus nerve is reduced compared to in wild-type mice

embryo
• in 54% of mice at E10.5
• in 46% of mice at E10.5 (23% left and 38% right)
• 8% of mice exhibit defects in the left sixth branchial arch artery unlike wild-type mice
• mice exhibit subtly altered neural crest cell migration to the caudal pharyngeal region compared with wild-type mice

craniofacial
• in 54% of mice at E10.5
• in 46% of mice at E10.5 (23% left and 38% right)
• 8% of mice exhibit defects in the left sixth branchial arch artery unlike wild-type mice

behavior/neurological

cellular
• mice exhibit subtly altered neural crest cell migration to the caudal pharyngeal region compared with wild-type mice




Genotype
MGI:4410356
ht11
Allelic
Composition
Chd7Gt(RRR136)Byg/Chd7+
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(RRR136)Byg mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
cardiovascular system
• in 33% of mice at E10.5
• in 29% of mice at E10.5 (18% left and 18% right)
• 7% of mice exhibit defects in the left sixth branchial arch artery unlike wild-type mice
• at E14.5, 5% of mice exhibit cervical arch or B-segment coarcation unlike wild-type mice
• 2 mice exhibit defects in the left common carotid unlike wild-type mice
• 14% of mice exhibit abnormal great vessels unlike wild-type mice

behavior/neurological

immune system
• in 11% of mice
• in 11% of mice

craniofacial
• in 33% of mice at E10.5
• in 29% of mice at E10.5 (18% left and 18% right)
• 7% of mice exhibit defects in the left sixth branchial arch artery unlike wild-type mice

embryo
• in 33% of mice at E10.5
• in 29% of mice at E10.5 (18% left and 18% right)
• 7% of mice exhibit defects in the left sixth branchial arch artery unlike wild-type mice

hematopoietic system
• in 11% of mice
• in 11% of mice

endocrine/exocrine glands
• in 11% of mice
• in 11% of mice




Genotype
MGI:7488670
ht12
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6 * DBA/2
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• 64% of adult mice exhibit a subtle cerebellar foliation anomaly, with variable severity between individual mice
• most pronounced foliation anomaly involves a small and posteriorly shifted lobule VIII associated with a shallow secondary fissure
• foliation defects result from defects in the timing and position of fissure formation during cerebellar development
• however, remaining 36% of mice exhibit a normal foliation structure
• adult mice (~P60) show a 9% reduction in mean total brain volume
• adult mice show a 9.7% reduction in mean total cortical volume
• mice that exhibit foliation defects in the vermis also show a hemisphere-specific foliation defect; overall penetrance of this foliation phenotype in the hemispheres is also 67%
• adult mice show a 15% reduction of simplex lobule in the anterior hemisphere of the cerebellum
• delayed formation of the superior posterior fissure results in a shallower fissure at later stages, incomplete separation of the simplex and Crus I lobules and hypoplasia of the simplex lobule
• mildly affected mice exhibit a deeper prepyramidal fissure and a correspondingly shallower secondary fissure, resulting in a subtle posterior shift of lobule VIII
• severely affected mice show a markedly smaller and even more posteriorly shifted lobule VIII associated with a shallow secondary fissure
• in some mice, the superior posterior fissure that separates the simplex lobule from Crus I appears to be shallower, leading to partial fusion of these lobules in the anterior cerebellar hemispheres
• at E18.5, mice show a general delay in fissure formation in the vermis, with shallower preculminate and primary fissures and absence of the secondary and posterolateral fissures
• at E18.5 and P0, 60% of mice show defects in fissure formation in the vermis, in agreement with the incidence foliation defects in adult mice; formation of the preculminate, primary, secondary, and posterolateral fissures is delayed while the prepyramidal fissure is shifted to a more posterior position
• similar to findings in the vermis, delayed fissure formation is seen in the hemispheres at P2; formation of the superior posterior fissure is specifically delayed, resulting in a shallower fissure at later stages, incomplete separation of the simplex and Crus I lobules and hypoplasia of the simplex lobule
• adult mice show a 16% reduction of lobule VIII in the posterior vermis of the cerebellum
• at P21, three of 7 mice show a small posterior shift of lobule VIII along lobule IX, while 2 of 7 mice show a more pronounced shift of lobule VIII accompanied by hypoplasia
• total incidence of foliation change affecting lobule VIII in the vermis is 67% (12 of 18)
• adult mice show a ~12% reduction in mean total cerebellar volume
• severely affected mice show a 17% in mean cerebellar volume
• ~65% (12 of 18) mice exhibit mild, but significant, cerebellar hypoplasia

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:262209




Genotype
MGI:7506303
ht13
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• cerebellar size is similar to controls




Genotype
MGI:7496091
ht14
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S1/SvImJ * 129S4/SvJae
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at 4 and 16 kHz but not at 32 kHz
• however, Wave 1 peak amplitude and peak latency are similar to controls

nervous system
• decrease in the number of satellite glial cells but neuron density in the adult spiral ganglion
• decrease in the number of satellite glial cells but neuron density in the adult spiral ganglion
• increase in myelin thickness on the spiral ganglion neurons
• myelin thickness is increased by 10% in the apex and 15% in the base spiral ganglia

cellular
• decrease in the number of satellite glial cells but neuron density in the adult spiral ganglion

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:332873




Genotype
MGI:3708350
ht15
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S1/SvImJ * 129S4/SvJae * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Chd7Gt(S20-7E1)Sor/Chd7+ mice exhibit defects of the semicircular canals

mortality/aging
• reduction in survival at weaning

reproductive system
• decreased fertility or nurturing behaviors in females that exhibit head-bobbing, circling and hyperactivity

hearing/vestibular/ear
• variability in the severity of defects in the lateral and posterior semicircular canals is seen between the left and right ears as well as between mice
• however, anterior semicircular canal is normal
• in 5 of 8 mice at E16.5
• severely truncated in 3 of 8 mice at E16.5 with outpouching at the ampulla present and truncation most notably at the nonampullated end
• in 4 of 8 mice at E16.5
• variable severity of truncations of the canal and reduction in size of the ampulla in 4 of 8 mice

behavior/neurological
• 24% of F2 offspring exhibit head-bobbing
• F1 mice have very few circlers while 24% of F2 offspring exhibit circling
• decreased fertility or nurturing behaviors in females that exhibit head-bobbing, circling and hyperactivity

embryo

growth/size/body
• despite similar growth velocities mice weigh less than wild-type

endocrine/exocrine glands
N
• at E10.5 Rathke's pouch is normal and the pituitary at E12.5-E16.5 is also normal despite the fact that in the human disease, patients have hypogonadotrophic hypogonadism

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:119812




Genotype
MGI:7496044
ht16
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S1/SvImJ * 129S4/SvJae * C57BL/6J * DBA/2J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• during exposure to 123 dB broadband noise 7 of 17 mice died

hearing/vestibular/ear
• generally smaller than in controls
• fusion of the arch to the dorsal wall of the middle ear cavity
• stapes defects are seen in 5 of 7 mice
• flattened
• fusion of the footplate to the otic capsule
• increase in the abundance of supernumerary rows of outer hair cells
• fusion of the stapedial footplate to the otic capsule
• increased mean thresholds at 4 kHz and 16 kHz but not at 32 kHz at 5 weeks of age
• increase in thresholds correlates with the absence of a free stapes
• flattened or absent at the mid-frequency range (8, 16, and 24 kHz) in most mice
• of the 10 mice that survived exposure to 123 dB broadband noise, 6 showed no inner or outer hair cell loss, normal distribution of nerve fibers in the cochlea and no change in hearing thresholds unlike exposure-matched controls
• the other 4 mice showed responses similar to exposure-matched controls
• resistance to noise-induced hearing loss correlates with presence of a fixed stapes
• mild hearing loss at low to mid frequencies

craniofacial
• generally smaller than in controls
• fusion of the arch to the dorsal wall of the middle ear cavity
• stapes defects are seen in 5 of 7 mice
• flattened
• fusion of the footplate to the otic capsule

skeleton
• generally smaller than in controls
• fusion of the arch to the dorsal wall of the middle ear cavity
• stapes defects are seen in 5 of 7 mice
• flattened
• fusion of the footplate to the otic capsule

nervous system
• increase in the abundance of supernumerary rows of outer hair cells

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:220430




Genotype
MGI:4835277
ht17
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S4/SvJaeSor
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• significantly fewer proliferating cells in the neurogenic domain of the ear at E9.5 and E10.5

nervous system
• decrease in the number of proliferating cells in the vestibulocochlear ganglion at E9.5 but not at E10.5
• significantly fewer proliferating cells in the neurogenic domain of the ear at E9.5 and E10.5
• decrease in the number of proliferating cells at E9.5 but not at E10.5
• decrease in the number of neuroblasts at E10.5 in the ventral otic epithelium and at E9.5 and E10.5 in the vestibulocochlear ganglion
• however, the number of neuroblasts is normal at E11.5

cellular
• decrease in the number of proliferating cells in the vestibulocochlear ganglion at E9.5 but not at E10.5
• significantly fewer proliferating cells in the neurogenic domain of the ear at E9.5 and E10.5




Genotype
MGI:5807347
ht18
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S4/SvJaeSor * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• tubules are generally less circular and frequently have irregular linings

vision/eye
• full penetrance of coloboma, although the extent of involvement within the retina and iris varies
• coloboma is seen at E15.5

endocrine/exocrine glands
• tubules are generally less circular and frequently have irregular linings

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:231044




Genotype
MGI:7492422
ht19
Allelic
Composition
Chd7tm2a(EUCOMM)Wtsi/Chd7+
Genetic
Background
involves: 129S5/SvEvBrd * C57BL/6N
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm2a(EUCOMM)Wtsi mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• absence of midline crossing resulting in dysgenesis of the corpus callosum in 3 of 3 mice
• 32% decrease in size
• 41% increase in size
• abnormally shaped
• increase of 100% on average on both sides of the brain

behavior/neurological
N
• no increase in locomotor activity during a modified SHIRPA or in the open field unlike mice heterozygous for Chd7Whi
• no change in heat sensitivity compared to controls
• show a trend toward reduced response
• less severe than in mice heterozygous for Chd7Whi

hematopoietic system
• percentage tends to be decreased but is not statistically significant

vision/eye
• abnormal pupil position or shape in 5 of 14 mice
• opaque lenses in mice with normal pupils only

homeostasis/metabolism
• show a trend toward reduced response

growth/size/body
• decreased by 16%
• decreased weight from early life to adulthood
• at 14 weeks of age

skeleton
• marginally reduced (15%)

immune system
• percentage tends to be decreased but is not statistically significant

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:330596




Genotype
MGI:5559523
ht20
Allelic
Composition
Chd7tm2a(EUCOMM)Wtsi/Chd7+
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6N
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm2a(EUCOMM)Wtsi mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological




Genotype
MGI:2174776
ht21
Allelic
Composition
Chd7Todo/Chd7+
Genetic
Background
involves: BALB/cAnNCrl * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Todo mutation (2 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal




Genotype
MGI:5437367
ht22
Allelic
Composition
Chd7Ome/Chd7+
Genetic
Background
involves: BALB/cByJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Ome mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Ear abnormalities in Chd7Ome/Chd7+ mice

reproductive system

cellular
• mice exhibit increased goblet cell density in the middle ear compared with wild-type mice

hearing/vestibular/ear
• the footplate is thinner and partially fused with surrounding bones
• the head of the stapes is shifted toward the anterior crus
• obturator foramen is smaller due to inward growth of the footplate and anterior crus
• greater Eustachian tube angle
• mice exhibit decreased epithelial cilia density in the middle ear compared with wild-type mice
• mice exhibit increased goblet cell density in the middle ear compared with wild-type mice
• mean ABR thresholds in each age-group from P21 to P120 are significantly higher than those of wild-type mice at all the frequencies tested
• mutant mice have amplitudes below zero at every frequency tested from P21 to P120, substantially lower than those in wild-type mice
• as early as P11, most mice exhibit otitis media with effusion, thickened epithelia, a dilated periosteum and inflammatory cells, increased goblet cells, cilia loss in the middle ear and Eustachian without bacterial cause compared with wild-type mice

craniofacial
• larger skull height/skull length ratio
• the footplate is thinner and partially fused with surrounding bones
• the head of the stapes is shifted toward the anterior crus
• obturator foramen is smaller due to inward growth of the footplate and anterior crus
• larger nose bone length to skull length ratio

growth/size/body
• larger nose bone length to skull length ratio
• at weaning
• at weaning

behavior/neurological

immune system
• as early as P11, most mice exhibit otitis media with effusion, thickened epithelia, a dilated periosteum and inflammatory cells, increased goblet cells, cilia loss in the middle ear and Eustachian without bacterial cause compared with wild-type mice

nervous system

skeleton
• larger skull height/skull length ratio
• the footplate is thinner and partially fused with surrounding bones
• the head of the stapes is shifted toward the anterior crus
• obturator foramen is smaller due to inward growth of the footplate and anterior crus

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:187200




Genotype
MGI:2684768
ht23
Allelic
Composition
Chd7Obt/Chd7+
Genetic
Background
involves: BALB/c * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Obt mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• developmental defect in timing of the fusion of the different regions of the semicircular canal
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal




Genotype
MGI:2684757
ht24
Allelic
Composition
Chd7Cycn/Chd7+
Genetic
Background
involves: BALB/c * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Cycn mutation (2 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal




Genotype
MGI:2684771
ht25
Allelic
Composition
Chd7Edy/Chd7+
Genetic
Background
involves: BALB/c * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Edy mutation (2 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• incomplete penetrance, 91% of bones; pointed or bobble-shaped end of the incudomalleal articulatory area; also seen in control mice at lower incidence (56%)
• incomplete penetrance, 11% of bones; abnormal incudomalleal joint
• incomplete penetrance, 64% of bones; malformed stirrup and/or abnormal crura
• thin or skewed crura
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal
• slight increase in CAP thresholds in mutant mice at various ages
• normal endocochlear potentials are seen

skeleton
• incomplete penetrance, 91% of bones; pointed or bobble-shaped end of the incudomalleal articulatory area; also seen in control mice at lower incidence (56%)
• incomplete penetrance, 11% of bones; abnormal incudomalleal joint
• incomplete penetrance, 64% of bones; malformed stirrup and/or abnormal crura
• thin or skewed crura
• defects involving the incudomalleal articulatory area varying from complete absence to a pointed or bobble-shaped end

nervous system
• slight increase in CAP thresholds in mutant mice at various ages
• normal endocochlear potentials are seen

craniofacial
• incomplete penetrance, 91% of bones; pointed or bobble-shaped end of the incudomalleal articulatory area; also seen in control mice at lower incidence (56%)
• incomplete penetrance, 11% of bones; abnormal incudomalleal joint
• incomplete penetrance, 64% of bones; malformed stirrup and/or abnormal crura
• thin or skewed crura




Genotype
MGI:2684749
ht26
Allelic
Composition
Chd7Dz/Chd7+
Genetic
Background
involves: BALB/c * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Dz mutation (2 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal




Genotype
MGI:2177302
ht27
Allelic
Composition
Chd7Lda/Chd7+
Genetic
Background
involves: BALB/c * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Lda mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal




Genotype
MGI:2177301
ht28
Allelic
Composition
Chd7Mt/Chd7+
Genetic
Background
involves: BALB/c * C3H/HeN
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Mt mutation (2 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• described as head weaving

growth/size/body
• described as small in size

hearing/vestibular/ear
• truncation of lateral canal with occasional absence of lateral ampulla
• variable penetrance of defects including small or absent canal and ampullae; variability often noted within left and right ears of same animal




Genotype
MGI:6281682
ht29
Allelic
Composition
Chd7Looper/Chd7+
Genetic
Background
involves: BALB/c * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Looper mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• Background Sensitivity: B.S. the average click auditory brainstem response (ABR) threshold is lower on the mixed C57BL/6 and BALB/c background than on the BALB/c background, but still increased compared to wild-type mice




Genotype
MGI:3616772
ht30
Allelic
Composition
Chd7Flo/Chd7+
Genetic
Background
involves: C3HeB/FeJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Flo mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• after mating to wild-type mice only 32% of pups at weaning are heterozygous

reproductive system
• females have vulva abnormalities
• most females have clitoral hypoplasia

vision/eye
• about 50% of mice have symptoms of keratoconjunctivitis sicca due to dry eyes

immune system
• about 50% of mice have symptoms of keratoconjunctivitis sicca due to dry eyes




Genotype
MGI:3616771
ht31
Allelic
Composition
Chd7Whi/Chd7+
Genetic
Background
involves: C3HeB/FeJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Whi mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• after mating to wild-type mice only 33% of pups at weaning are heterozygous

behavior/neurological
• 1 of 28 of mice was a non-circler but displayed severe headshaking
• seen in 27 of 28 of mice with the 1 non-circler displaying severe headshaking

craniofacial
• at E15.5, 35% of mice have palate defects ranging from partial closure to complete cleft
• at E16.5, in some mice the palate shelves touch but have not fused while in others the palate remains open
• at E15.5 most mice with cleft palate had fewer folds in the palate
• at E16.5 in 2 of 3 mice with cleft palate the choanae are less well developed and the nasal bucal membrane persists
• at E15.5, the pinna primordium is smaller than in wild-type

hearing/vestibular/ear
• at E15.5, the pinna primordium is smaller than in wild-type

cardiovascular system
• at E15.5, 3 of 5 mice had an interventricular septal defect and these mice also had edema
• at E15.5 and E16.5, a few mice have mild to severe hemorrhage

homeostasis/metabolism
• at E15.5 and E16.5, about 45% of mice display mild or severe edema

growth/size/body
• at E15.5, 35% of mice have palate defects ranging from partial closure to complete cleft
• at E16.5, in some mice the palate shelves touch but have not fused while in others the palate remains open
• at E15.5 most mice with cleft palate had fewer folds in the palate
• at E16.5 in 2 of 3 mice with cleft palate the choanae are less well developed and the nasal bucal membrane persists
• at E15.5, the pinna primordium is smaller than in wild-type
• seen after weaning

adipose tissue

limbs/digits/tail
• at E15.5, toes on the hind feet had not fully separated; however, by E16.5 separation is complete

reproductive system
• 94% of females have vulva abnormalities
• most females have clitoral hypoplasia; however, no genital anomalies are seen in males

respiratory system
• at E16.5 in 2 of 3 mice with cleft palate the choanae are less well developed and the nasal bucal membrane persists

vision/eye
• about 50% of mice have symptoms of keratoconjunctivitis sicca due to dry eyes with the right eye more commonly affected (13 of 28) compared to the left eye (3 of 28)

digestive/alimentary system
• at E15.5, 35% of mice have palate defects ranging from partial closure to complete cleft
• at E16.5, in some mice the palate shelves touch but have not fused while in others the palate remains open
• at E15.5 most mice with cleft palate had fewer folds in the palate

immune system
• about 50% of mice have symptoms of keratoconjunctivitis sicca due to dry eyes with the right eye more commonly affected (13 of 28) compared to the left eye (3 of 28)

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:104123




Genotype
MGI:5436060
ht32
Allelic
Composition
Chd7Coa1/Chd7+
Genetic
Background
involves: C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Coa1 mutation (0 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• only 55% survive to maturity

growth/size/body

behavior/neurological

hearing/vestibular/ear
• hearing loss

nervous system
• shorter invaginated cortical neuroepithelium at E12.5 in the dorsal midline region
• wider gap in the dorsal midline at E13.5
• decrease in apoptosis in the dorsomedial region at E10.5 and inadequate midline invagination
• however, proliferation is similar to controls
• with variable severity
• slightly expanded at E12.5
• expanded at E13.5, E15.5 and E17.5
• remarkably expanded in pups
• detectable at E12.5
• expanded at E15.5, E17.5 and in pups
• axons fail to cross the midline at E17.5
• axons fail to cross the midline at E17.5
• agenesis at E17.5
• thin frontal cortex with variable severity
• thin parietal cortex with variable severity
• arhinencephaly with variable severity
• no visible olfactory bulb in severely affected mice
• in mice with a mild phenotype

reproductive system

vision/eye
• eye defects

embryo
• shorter invaginated cortical neuroepithelium at E12.5 in the dorsal midline region




Genotype
MGI:4410366
cn33
Allelic
Composition
Chd7Whi/Chd7+
Genetic
Background
B6.C3Fe-Chd7Whi
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Whi mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Malformations of the semicircular canals in Chd7Whi/Chd7+, Tbx1tm1Bld/Tbx1+, and Chd7Whi/Chd7+ Tbx1tm1Bld/Tbx1+ mice

hearing/vestibular/ear
• 20% of mice exhibit lateral canal truncations unlike wild-type mice
• 67% of mice possess an ampulla only unlike wild-type mice
• 93% mice exhibit posterior canal truncations unlike wild-type mice
• 7% of mice exhibit posterior canal fused to the crus commune unlike wild-type mice




Genotype
MGI:4410359
cn34
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
H2az2Tg(Wnt1-cre)11Rth/H2az2+
Genetic
Background
either: (involves: 129P2/OlaHsd * C57BL/6 * C57BL/6J * CBA/J) or (involves: 129P2/OlaHsd * C57BL/6J * CBA/J * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
H2az2Tg(Wnt1-cre)11Rth mutation (2 available); any H2az2 mutation (25 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Effects of Cre-mediated rescue of Chd7Gt(XK403)Byg mutation on the arch artery phenotype at E10.5

cardiovascular system

craniofacial

embryo




Genotype
MGI:4410361
cn35
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Mesp1tm2(cre)Ysa/Mesp1+
Genetic
Background
either: (involves: 129P2/OlaHsd * C57BL/6 * CBA) or (involves: 129P2/OlaHsd * C57BL/6 * CBA * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
Mesp1tm2(cre)Ysa mutation (3 available); any Mesp1 mutation (18 available)
phenotype observed in females
phenotype observed in males
N normal phenotype



Genotype
MGI:4410362
cn36
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Tfap2atm1(cre)Moon/Tfap2a+
Genetic
Background
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
Tfap2atm1(cre)Moon mutation (1 available); any Tfap2a mutation (39 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Effects of Cre-mediated rescue of Chd7Gt(XK403)Byg mutation on the arch artery phenotype at E10.5

embryo
N
• mice exhibit normal pharyngeal arch morphology




Genotype
MGI:4410360
cn37
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Tg(Tbx1-cre)1Joe/0
Genetic
Background
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
Tg(Tbx1-cre)1Joe mutation (0 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Effects of Cre-mediated rescue of Chd7Gt(XK403)Byg mutation on the arch artery phenotype at E10.5




Genotype
MGI:4835273
cn38
Allelic
Composition
Chd7tm1.1Dmm/Chd7+
Foxg1tm1(cre)Skm/Foxg1+
Genetic
Background
involves: 129 * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (134 available)
Foxg1tm1(cre)Skm mutation (2 available); any Foxg1 mutation (30 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• decrease in the number of proliferating cells in the otic epithelium at E10.5
• truncated or hypoplastic

nervous system
• decrease in the number of proliferating cells at E9.5 but not at E10.5




Genotype
MGI:5774943
cn39
Allelic
Composition
Chd7tm1.1Dmm/Chd7+
Tg(rx3-icre)1Mjam/0
Genetic
Background
involves: 129S6/SvEvTac
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (134 available)
Tg(rx3-icre)1Mjam mutation (0 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
vision/eye
• mice show full-depth colobomas at E12.5 with complete penetrance

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:231044




Genotype
MGI:7518227
cn40
Allelic
Composition
Chd7tm2c(EUCOMM)Wtsi/Chd7+
Tg(Atoh1-cre)1Bfri/0
Genetic
Background
involves: C57BL/6 * C57BL/6J * C57BL/6N * CBA
Cell Lines EPD0019_1_D07
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm2c(EUCOMM)Wtsi mutation (0 available); any Chd7 mutation (134 available)
Tg(Atoh1-cre)1Bfri mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• rapid degeneration of inner hair cells at P10 and P14
• incidence is reduced compared to homozygous mice (5 of 24 mice)
• degeneration of outer hair cells is slower than that of inner hair cells
• incidence is reduced compared to homozygous mice (5 of 24)
• only 1 of 7 shows severe-profound hearing loss

nervous system
• rapid degeneration of inner hair cells at P10 and P14
• incidence is reduced compared to homozygous mice (5 of 24 mice)
• degeneration of outer hair cells is slower than that of inner hair cells
• incidence is reduced compared to homozygous mice (5 of 24)




Genotype
MGI:7518243
cn41
Allelic
Composition
Chd7tm2c(EUCOMM)Wtsi/Chd7+
Tg(Neurod1-cre)RZ24Gsat/0
Genetic
Background
involves: C57BL/6J * C57BL/6N * FVB/NTac
Cell Lines EPD0019_1_D07
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm2c(EUCOMM)Wtsi mutation (0 available); any Chd7 mutation (134 available)
Tg(Neurod1-cre)RZ24Gsat mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear

nervous system
• slower degeneration of neurons between P1 and P21, reducing numbers to 50% that of controls by P21
• slower degeneration of spiral ganglion neurons between P1 and P21, reducing numbers to 50% that of controls by P21




Genotype
MGI:4410367
cx42
Allelic
Composition
Chd7Whi/Chd7+
Tbx1tm1Bld/Tbx1+
Genetic
Background
B6.Cg-Chd7Whi Tbx1tm1Bld
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Whi mutation (1 available); any Chd7 mutation (134 available)
Tbx1tm1Bld mutation (1 available); any Tbx1 mutation (36 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Malformations of the semicircular canals in Chd7Whi/Chd7+, Tbx1tm1Bld/Tbx1+, and Chd7Whi/Chd7+ Tbx1tm1Bld/Tbx1+ mice

hearing/vestibular/ear
• all mice exhibit defects in the lateral canal including canal truncation (16%), presence of only the ampulla (67%), or absence of the canal (17%) unlike wild-type mice
• 58% mice exhibit posterior canal truncations unlike wild-type mice
• 42% of mice exhibit posterior canal fused to the crus commune unlike wild-type mice




Genotype
MGI:7491994
cx43
Allelic
Composition
Chd7Whi/Chd7+
Fgfr1Hspy/Fgfr1+
Genetic
Background
C3HeB/FeJ-Chd7Whi Fgfr1Hspy
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Whi mutation (1 available); any Chd7 mutation (134 available)
Fgfr1Hspy mutation (1 available); any Fgfr1 mutation (218 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• no mice were recovered at weaning (0/55)
• 2 mice were recovered at P0 (1 dead), suggesting perinatal or early postnatal lethality

growth/size/body
• at E16.5, mice showed cleft palate with variable penetrance
• at E16.5, mice showed choanal atresia with variable penetrance

craniofacial
• at E16.5, mice showed cleft palate with variable penetrance
• at E16.5, mice showed choanal atresia with variable penetrance

cardiovascular system
• at E16.5, mice showed a heart defect with variable penetrance

digestive/alimentary system
• at E16.5, mice showed cleft palate with variable penetrance

respiratory system
• at E16.5, mice showed choanal atresia with variable penetrance

nervous system
N
• mice showed a normal distribution of the GnRH1 neurons at E16.5
• mice do NOT display olfactory bulb defects

reproductive system
N
• mice do NOT display hypogonadotropic hypogonadism




Genotype
MGI:4410364
cx44
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Tbx1tm1Bld/Tbx1+
Genetic
Background
either: (involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6) or (involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6 * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
Tbx1tm1Bld mutation (1 available); any Tbx1 mutation (36 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Pharyngeal arch artery patterning defects in Chd7Whi/Chd7+, Chd7Gt(XK403)Byg/Chd7+ and Chd7Gt(XK403)Byg/Chd7+ Tbx1tm1Bld/Tbx1+ embryos

cardiovascular system
• at E10.5, 6 of 17 mice exhibit bilateral fourth pharyngeal arch aplasia compared with 1 of 9 single heterozygotes
• at E14.5, mice exhibit an increase in interrupted aortic arches compared with either single heterozygote
• at E14.5, 7 of 17 mice exhibit aberrant right subclavian artery unlike wild-type mice

craniofacial
• at E10.5, 6 of 17 mice exhibit bilateral fourth pharyngeal arch aplasia compared with 1 of 9 single heterozygotes

embryo
• at E10.5, 6 of 17 mice exhibit bilateral fourth pharyngeal arch aplasia compared with 1 of 9 single heterozygotes

hearing/vestibular/ear

hematopoietic system
• at E14.5, 4 of 17 mice exhibit ectopic thymus gland unlike single heterozygotes

immune system
• at E14.5, 4 of 17 mice exhibit ectopic thymus gland unlike single heterozygotes

endocrine/exocrine glands
• at E14.5, 4 of 17 mice exhibit ectopic thymus gland unlike single heterozygotes




Genotype
MGI:4410379
cx45
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Fgf8tm1.2Mrt/Fgf8+
Genetic
Background
either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * CD-1)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
Fgf8tm1.2Mrt mutation (0 available); any Fgf8 mutation (21 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
cardiovascular system

craniofacial

embryo




Genotype
MGI:7506305
cx46
Allelic
Composition
Chd7Gt(XK403)Byg/Chd7+
Fgf8tm2Mrt/Fgf8+
Genetic
Background
involves: 129 * 129P2/OlaHsd * C57BL/6J * DBA/2J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(XK403)Byg mutation (0 available); any Chd7 mutation (134 available)
Fgf8tm2Mrt mutation (1 available); any Fgf8 mutation (21 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• cerebellar vermis aplasia present at birth
• due to cerebellar vermis aplasia
• cerebellar hemispheres are similar in size to controls




Genotype
MGI:7506323
cx47
Allelic
Composition
Aldh1a3tm1Gdu/Aldh1a3tm1Gdu
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S4/SvJaeSor * C57BL/6 * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Aldh1a3tm1Gdu mutation (1 available); any Aldh1a3 mutation (24 available)
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• reduced penetrance of semicircular canal abnormalities compared to mice heterozygous for the Chd7 mutation alone




Genotype
MGI:7506322
cx48
Allelic
Composition
Aldh1a3tm1Gdu/Aldh1a3+
Chd7Gt(S20-7E1)Sor/Chd7+
Genetic
Background
involves: 129S4/SvJaeSor * C57BL/6 * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Aldh1a3tm1Gdu mutation (1 available); any Aldh1a3 mutation (24 available)
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• semicircular abnormalities at E14.5 similar to mice heterozygous for the Chd7 mutation alone




Genotype
MGI:7429212
cx49
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7+
Arb2aTg(Tyr)TpNpln/Arb2a+
Genetic
Background
involves: 129S4/SvJaeSor * C57BL/6 * FVB/N
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Arb2aTg(Tyr)TpNpln mutation (0 available); any Arb2a mutation (29 available)
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (134 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• mice exhibit a higher frequency of premature postnatal death
• lower than expected number of mice at birth

growth/size/body
• mice are smaller at weaning age than wild-type mice or either single heterozygote

behavior/neurological

reproductive system
• mice exhibit a higher frequency of male-to-female sex reversal

vision/eye
• E12.5 eyes show a wider choroidal fissure than in either single heterozygote
• coloboma is much more severe than in single heterozygotes





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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory