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Hbb-bs
Gene Detail
Symbol

Name
ID
Member of
Hbb-bs
hemoglobin, beta adult s chain
MGI:5474852
Hbb cluster
Synonyms
beta s
Feature Type
protein coding gene
Genetic Map
Chromosome 7
Syntenic
Sequence Map
Chr7:103826534-103828096 bp, - strand
From VEGA annotation of GRCm38

  1563 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68066  Vertebrate Homology Class
1 human; 2 mouse; 4 rat; 1 chimpanzee; 1 rhesus macaque; 3 dog

Gene Tree: Hbb-bs

Human
homologs
Human Homolog HBB, hemoglobin, beta
NCBI Gene ID 3043
neXtProt AC  NX_P68871
Human Synonyms  beta-globin, CD113t-C
Human Chr (Location)  11p15.5; chr11:5225466-5227071 (-)  GRCh38
Disease Associations  (7) Diseases Associated with Human HBB
Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(11)
Interactions
Hbb-bs interacts with 9 markers (Mir203, Mir298, Mir450-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Component blood microparticle, extracellular vesicular exosome, ...
Function haptoglobin binding, hemoglobin alpha binding, ...
Expression
Literature Summary: (3 records)
Data Summary: Results (89)    Tissues (33)    Images (13)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 43
RT-PCR 46
cDNA source data(38)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(40) cDNA(38) Primer pair(2)
Other database
links
VEGA Gene ModelOTTMUSG00000023334 (Evidence)
Ensembl Gene ModelENSMUSG00000052305 (Evidence)
Entrez Gene100503605 (Evidence)
Consensus CDS ProjectCCDS52339.1
International Mouse Knockout Project StatusHbb-bs
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023334 VEGA Gene Model | MGI Sequence Detail 1563 C57BL/6J ±  kb
transcript OTTMUST00000045644 VEGA | MGI Sequence Detail 778 Not Applicable 
polypeptide OTTMUSP00000020530 VEGA | MGI Sequence Detail 147 Not Applicable 

For the selected sequences
All sequences(54) RefSeq(2)
Polymorphisms
SNPs within 2kb(96 from dbSNP Build 137)    SNPs within 2kb including multiple locations(134)
References
(Earliest) J:32353 Weaver S, et al., The adult beta-globin genes of the single type mouse C57BL. Cell. 1981 May;24(2):403-11
(Latest) J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
All references(16)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory