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Tsc22d4 Gene Detail
Summary
  • Symbol
    Tsc22d4
  • Name
    TSC22 domain family, member 4
  • Synonyms
    0610009M14Rik, 1700023B23Rik, Thg-1pit
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926079
    NCBI Gene: 78829
Location & Maps
more
  • Sequence Map
    Chr5:137745730-137768450 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      22721 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 76.64 cM, cytoband G1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    C7orf61, chromosome 7 open reading frame 61
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C7orf61, chromosome 7 open reading frame 61
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 402573
    neXtProt AC: NX_Q8IZ16

  • Chr Location
    7q22.1; chr7:100456615-100464271 (-)  GRCh38.p2

  • Human Ortholog
    TSC22D4, TSC22 domain family member 4
    Orthology source: HomoloGene
  • Synonyms
    THG1, THG-1, TILZ2
  • Links
    NCBI Gene ID: 81628
    neXtProt AC: NX_Q9Y3Q8

  • Chr Location
    7p21-p15; chr7:100466519-100479279 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    16
  • Gene trapped
    15
  • Targeted
    1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022818 VEGA Gene Model | MGI Sequence Detail 22721 C57BL/6J ±  kb
transcript OTTMUST00000054843 VEGA | MGI Sequence Detail 2730 Not Applicable  
polypeptide OTTMUSP00000026205 VEGA | MGI Sequence Detail 509 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    9 from dbSNP Build 142
Protein
Information
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  • UniProt
    11 Sequences
  • Protein Ontology
    PR:000016713 TSC22 domain family protein 4
  • InterPro Domains
    IPR031534 Protein of unknown function DUF4703
    IPR000580 TSC-22 / Dip / Bun
Molecular
Reagents
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  • All nucleic 30
    cDNA 28
    Primer pair 2

    Microarray probesets 3
Other
Accession IDs
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MGI:1924190, MGI:2140863
References
more
  • Summaries
    All 40
    Developmental Gene Expression 6
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:201385 Canterini S, et al., Multiple TSC22D4 iso-/phospho-glycoforms display idiosyncratic subcellular localizations and interacting protein partners. FEBS J. 2013 Mar;280(5):1320-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory