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Pomp
Gene Detail
 Symbol
Name
ID
Pomp
proteasome maturation protein
MGI:1913787
Synonyms 2510048O06Rik, Ump1
Feature Type protein coding gene
Genetic Map
Chromosome 5
87.52 cM, cytoband G3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:147860628-147875778 bp, + strand
From NCBI annotation of GRCm38

  15151 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41077  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: proteasome maturation protein, UMP1 type
Gene Tree: Pomp

Human
homologs
Human Homolog POMP, proteasome maturation protein
NCBI Gene ID 51371
neXtProt AC  NX_Q9Y244
Human Synonyms  C13orf12, PNAS-110, UMP1
Human Chr (Location)  13q12.3; chr13:28659004-28678957 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human POMP
Alleles
and
phenotypes
All alleles(13) : Targeted(2) Gene trapped(11)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process proteasome assembly
Component cytoplasm, endoplasmic reticulum, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (8)    Tissues (4)    Images (5)
Theiler Stages: 22, 23
Assay TypeResults
RNA in situ 8
cDNA source data(164)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(164) cDNA(164)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000029649 (Evidence)
Entrez Gene66537 (Evidence)
UniGene332855
DFCITC1572835, TC1666769
DoTSDT.496124, DT.94383388
NIA Mouse Gene IndexU006455
Consensus CDS ProjectCCDS39402.1
International Mouse Knockout Project StatusPomp
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 66537 NCBI Gene Model | MGI Sequence Detail 15151 C57BL/6J ±  kb
transcript NM_025624 RefSeq | MGI Sequence Detail 734 C57BL/6 
polypeptide Q9CQT5 UniProt | EBI | MGI Sequence Detail 141 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(16 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008012 Proteasome maturation factor UMP1
Protein Ontology PR:000013017 proteasome maturation protein
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:192873 Shin SW, et al., Mouse zygote-specific proteasome assembly chaperone important for maternal-to-zygotic transition. Biol Open. 2013;2:170-182
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory