75 phenotypes from 15 alleles in 21 genetic backgrounds

Allelic Composition Genetic Background	Annotated Term	Reference
Cd79atm2(cre/Esr1*)Reth/Cd79a+ Rag1tm1.1Sadu/Rag1tm1.1Sadu involves: BALB/c	normal immune system phenotype	J:155473
Rag1/Rag2tm1Mnz/Rag1/Rag2tm1Mnz involves: 129P2/OlaHsd * C57BL/6	abnormal double-negative T cell morphology	J:90487
	abnormal double-positive T cell morphology	J:90487
	abnormal T cell morphology	J:90487
	decreased T cell number	J:90487
Rag1coln/Rag1coln C57BL/6JAnu-Rag1coln/AnuApb	absent B cells	J:104190
	absent T cells	J:104190
Rag1em2Mvw/Rag1em2Mvw A/J-Rag1em2Mvw/MvwJ	absent B cells	J:332675
	absent T cells	J:332675
	arrested B cell differentiation	J:332675
	arrested T cell differentiation	J:332675
Rag1em3Mvw/Rag1em3Mvw 129S1/SvImJ-Rag1em3Mvw/Mvw	absent B cells	J:332675
	absent T cells	J:332675
	arrested B cell differentiation	J:332675
	arrested T cell differentiation	J:332675
Rag1m1Anu/Rag1m1Anu C57BL/6NCrlAnu-Rag1m1Anu	decreased lymphocyte cell number	J:104190
Rag1m1Btlr/Rag1m1Btlr C57BL/6J-Rag1m1Btlr	absent late pro-B cells	J:150635
	decreased CD4-positive, alpha-beta T cell number	J:150635
	decreased CD8-positive, alpha-beta T cell number	J:150635
Rag1m2Btlr/Rag1m2Btlr involves: C57BL/6J	abnormal class switch recombination	J:185495
	decreased B cell number	J:185495
	decreased IgG level	J:185495
	decreased IgM level	J:185495
	decreased T cell number	J:185495
Rag1m3Btlr/Rag1m3Btlr C57BL/6J-Rag1m3Btlr	increased central memory CD8 positive, alpha-beta T cell number	J:272858
Rag1m4Btlr/Rag1m4Btlr C57BL/6J-Rag1m4Btlr	abnormal CD8-positive, alpha-beta T cell differentiation	J:272094
	abnormal T cell differentiation	J:272094
	decreased B cell number	J:272094
	decreased CD8-positive, naive alpha-beta T cell number	J:272094
	increased alpha-beta T cell number	J:272094
	increased CD8-positive, alpha-beta T cell number	J:272094
	increased central memory CD8 positive, alpha-beta T cell number	J:272094
Rag1tm1(cre)Thr/Rag1tm1(cre)Thr Not Specified	abnormal lymphopoiesis	J:86869
	absent lymphocyte	J:86869
Rag1tm1(GFP)Imku/Rag1tm1(GFP)Imku involves: C57BL/6 * CBA	abnormal immunoglobulin V(D)J recombination	J:79416
Rag1tm1.1Sadu/Rag1tm1.1Sadu involves: BALB/c	arrested B cell differentiation	J:155473
Rag1tm1Fwa/Rag1tm1Fwa involves: 129	abnormal B cell differentiation	J:86464
	abnormal T cell differentiation	J:86464
	decreased B cell number	J:86464
	increased double-negative T cell number	J:86464
	thymus hypoplasia	J:86464
Rag1tm1Jsek/Rag1+ involves: 129S6/SvEvTac	abnormal B cell differentiation	J:146912
	abnormal immunoglobulin heavy chain V(D)J recombination	J:146912
	abnormal T cell differentiation	J:146912
	abnormal T cell receptor beta chain V(D)J recombination	J:146912
	decreased double-positive T cell number	J:146912
Rag1tm1Jsek/Rag1tm1Jsek involves: 129S6/SvEvTac	abnormal immunoglobulin heavy chain V(D)J recombination	J:146912
	abnormal immunoglobulin level	J:146912
	abnormal lymphopoiesis	J:146912
	abnormal T cell receptor beta chain V(D)J recombination	J:146912
	abnormal T cell receptor V(D)J recombination	J:146912
	absent immature B cells	J:146912
	absent mature B cells	J:146912
	arrested B cell differentiation	J:146912
	arrested T cell differentiation	J:146912
	decreased CD4-positive, alpha-beta T cell number	J:146912
	decreased CD8-positive, alpha-beta T cell number	J:146912
	decreased double-positive T cell number	J:146912
	decreased gamma-delta T cell number	J:146912
	increased double-negative T cell number	J:146912
	increased pro-B cell number	J:146912
	spontaneous chromosome breakage	J:146912
	thymus hypoplasia	J:146912
Rag1tm1Mom/Rag1tm1Mom B6.129S7-Rag1tm1Mom	decreased IgM level	J:78613
	decreased immunoglobulin level	J:111828
	decreased vascular permeability	J:78613
	dermatitis	J:111828
	ear inflammation	J:111828
	epidermal hyperplasia	J:111828
	increased eosinophil cell number	J:111828
	mixed cellular infiltration to dermis	J:111828
	scaly skin	J:111828
	thick skin	J:111828
Rag1tm1Mom/Rag1tm1Mom involves: 129S7/SvEvBrd	abnormal double-negative T cell morphology	J:112990
	abnormal neuron proliferation	J:170591
	abnormal thymus epithelium morphology	J:125864
	decreased inflammatory response	J:94420
Rag1tm1Mom/Rag1tm1Mom involves: 129S7/SvEvBrd * C57BL/6	abnormal coat/hair pigmentation	J:138466
	abnormal eye morphology	J:138466
	abnormal lymphatic vessel morphology	J:119344
	abnormal respiratory system morphology	J:119344
	abnormal response to infection	J:119344
	abnormal retina morphology	J:138466
	abnormal skin pigmentation	J:138466
	autoimmune response	J:138466
	decreased neutrophil cell number	J:119344
	decreased susceptibility to induced colitis	J:194587
Rag1tm1Mom/Rag1tm1Mom involves: 129S7/SvEvBrd * C57BL/6 * FVB * NOD	decreased lymphocyte cell number	J:111874
	small thymus	J:111874
Rag1tm1Mom/Rag1tm1Mom involves: 129S7/SvEvBrd * C57BL/10	abnormal bone remodeling	J:129304
	normal skeleton phenotype	J:129304
Rag1tm1Mom/Rag1tm1Mom involves: 129S7/SvEvBrd * CD-1	abnormal B cell differentiation	J:1934
	abnormal immunoglobulin V(D)J recombination	J:1934
	abnormal inguinal lymph node morphology	J:1934
	abnormal T cell differentiation	J:1934
	abnormal T cell morphology	J:1934
	abnormal T cell receptor V(D)J recombination	J:1934
	absent mature B cells	J:1934
	normal behavior/neurological phenotype	J:1934
	decreased IgM level	J:1934
	normal nervous system phenotype	J:1934
	spleen hypoplasia	J:1934
	thymus hypoplasia	J:1934
Rag1tm1Mom/Rag1tm1Mom NOD.129S7(B6)-Rag1tm1Mom	abnormal level of surface class II molecules	J:109843
	decreased CD4-positive, alpha-beta T cell number	J:109843
	decreased CD8-positive, alpha-beta T cell number	J:109843
	decreased immunoglobulin level	J:109843
	decreased mature B cell number	J:109843
	impaired natural killer cell mediated cytotoxicity	J:109843
	increased granulocyte number	J:109843
	increased immature B cell number	J:109843
	increased macrophage cell number	J:109843
	increased NK cell number	J:109843
	spleen hypoplasia	J:109843