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Sel1l3 Gene Detail
Summary
  • Symbol
    Sel1l3
  • Name
    sel-1 suppressor of lin-12-like 3 (C. elegans)
  • Synonyms
    2310045A20Rik, mKIAA0746
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916941
    NCBI Gene: 231238
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:53264425-53370794 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 28.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2591 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916941
 protein coding gene Chr5:53264425-53371269 (-)
129S1/SvImJ ENSMUSG00200000846
 protein coding gene Chr5:48817918-48924284 (-)
A/J ENSMUSG00195014844
 protein coding gene Chr5:48191400-48297722 (-)
AKR/J ENSMUSG00220000567
 protein coding gene Chr5:48272846-48379164 (-)
BALB/cJ ENSMUSG00180006195
 protein coding gene Chr5:47966819-48073764 (-)
C3H/HeJ ENSMUSG00175014792
 protein coding gene Chr5:49994098-50100419 (-)
C57BL/6NJ ENSMUSG00215001693
 protein coding gene Chr5:48739771-48846153 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027223
 protein coding gene Chr5:47054272-47163392 (-)
CAST/EiJ ENSTCUG00005003064
 protein coding gene Chr5:48095308-48202398 (-)
CBA/J ENSMUSG00210024027
 protein coding gene Chr5:48941026-49047334 (-)
DBA/2J ENSMUSG00185000058
 protein coding gene Chr5:50819534-50925851 (-)
FVB/NJ ENSMUSG00205002766
 protein coding gene Chr5:47793834-47900190 (-)
JF1/MsJ ENSUMUG00000000529
 protein coding gene Chr5:55377595-55484912 (-)
LP/J ENSMUSG00230009182
 protein coding gene Chr5:55481522-55587895 (-)
NOD/ShiLtJ ENSMUSG00190000435
 protein coding gene Chr5:47886520-47992834 (-)
NZO/HlLtJ ENSMUSG00225028065
 protein coding gene Chr5:60599272-60705581 (-)
PWK/PhJ ENSLUMG00010001476
 protein coding gene Chr5:48039900-48147079 (-)
SPRET/EiJ ENSMSPG00010012576
 protein coding gene Chr5:49524007-49637817 (-)
WSB/EiJ ENSIUOG00005018508
 protein coding gene Chr5:50843981-50952287 (-)



Homology
more
  • Human Ortholog
    SEL1L3, SEL1L family member 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SEL1L3, SEL1L family member 3
  • Synonyms
    Sel-1L3
  • Links
    NCBI Gene ID: 23231
    UniProt: Q68CR1

  • Chr Location
    4p15.2; chr4:25713964-25863760 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    23 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    792
  • Tissues
    41
  • cDNA Data
    43
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 231238 NCBI Gene Model | MGI Sequence Detail 106370 C57BL/6J ±  kb
    transcript NM_172710 RefSeq | MGI Sequence Detail 4532 C57BL/6  
    polypeptide Q80TS8 UniProt | EBI | MGI Sequence Detail 1137 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 45
      cDNA 43
      Primer pair 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2140876
    References
    more
    • Summaries
      All 54
      Developmental Gene Expression 7
      Gene Ontology 1
      Phenotypes 23
    • Earliest
      J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory