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Nim1k Gene Detail
Summary
  • Symbol
    Nim1k
  • Name
    NIM1 serine/threonine protein kinase
  • Synonyms
    E130304F04Rik, Nim1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442399
    NCBI Gene: 245269
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:119710094-119755882 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    412 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442399
 protein coding gene Chr13:119710094-119755882 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020977
 protein coding gene Chr13:122653781-122701361 (-)
A/J MGP_AJ_G0020927
 protein coding gene Chr13:117780504-117830478 (-)
AKR/J MGP_AKRJ_G0020902
 protein coding gene Chr13:121238711-121285631 (-)
BALB/cJ MGP_BALBcJ_G0020927
 protein coding gene Chr13:118344222-118393654 (-)
C3H/HeJ MGP_C3HHeJ_G0020715
 protein coding gene Chr13:121096252-121143583 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021363
 protein coding gene Chr13:126335490-126381324 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018932
 protein coding gene Chr13:112616457-112663779 (-)
CAST/EiJ MGP_CASTEiJ_G0020236
 protein coding gene Chr13:120846423-120900798 (-)
CBA/J MGP_CBAJ_G0020678
 protein coding gene Chr13:131078920-131130768 (-)
DBA/2J MGP_DBA2J_G0020801
 protein coding gene Chr13:117257787-117303869 (-)
FVB/NJ MGP_FVBNJ_G0020785
 protein coding gene Chr13:115867883-115913566 (-)
LP/J MGP_LPJ_G0020878
 protein coding gene Chr13:122724474-122770038 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020811
 protein coding gene Chr13:131878182-131927155 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021398
 protein coding gene Chr13:120860698-120905893 (-)
PWK/PhJ MGP_PWKPhJ_G0019988
 protein coding gene Chr13:116141024-116186811 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019810
 protein coding gene Chr13:117005574-117056782 (-)
WSB/EiJ MGP_WSBEiJ_G0020294
 protein coding gene Chr13:121463177-121510285 (-)



Homology
more
  • Human Ortholog
    NIM1K, NIM1 serine/threonine protein kinase
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NIM1K, NIM1 serine/threonine protein kinase
    Orthology source: HGNC, HomoloGene
  • Synonyms
    NIM1
  • Links
    NCBI Gene ID: 167359
    neXtProt AC: NX_Q8IY84
    UniProt: Q8IY84

  • Chr Location
    5p12; chr5:43192054-43280850 (+)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 25286
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NIM1K
  • Gene Tree
    Nim1k
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    12
  • Tissues
    8
  • cDNA Data
    21
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 245269 NCBI Gene Model | MGI Sequence Detail 45789 C57BL/6J ±  kb
transcript NM_175538 RefSeq | MGI Sequence Detail 4103 C57BL/6  
polypeptide Q8BHI9 UniProt | EBI | MGI Sequence Detail 436 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 22

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/04/2018
MGI 6.13 		The Jackson Laboratory