Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes F9
  • Mouse genes F9
  • Rat genes F9
  • Zfish genes f9a,f9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set F9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	F9	IDA		Human	PMID:14722079
Molecular Function	GO:0005509	calcium ion binding	F9	IDA		Human	PMID:20121197
Molecular Function	GO:0005509	calcium ion binding	F9	IDA		Human	PMID:9169594
Molecular Function	GO:0004175	endopeptidase activity	F9	IDA		Human	PMID:20121197
Molecular Function	GO:0004175	endopeptidase activity	F9	IDA		Human	PMID:2592373
Molecular Function	GO:0046872	metal ion binding	F9	EXP		Human	PMID:14722079
Molecular Function	GO:0008233	peptidase activity	F9	IDA		Mouse	PMID:15178576
Molecular Function	GO:0005515	protein binding	F9	IPI	UniProtKB:P00451:PRO_0000002968	Human	PMID:26157780
Molecular Function	GO:0005515	protein binding	F9	IPI	UniProtKB:Q3U4G3	Human	PMID:26414444
Cellular Component	GO:0062023	collagen-containing extracellular matrix	F9	HDA		Human	PMID:25037231
Cellular Component	GO:0070062	extracellular exosome	F9	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	F9	IDA		Human	PMID:2592373
Cellular Component	GO:0005615	extracellular space	F9	IDA		Human	PMID:8632006
Biological Process	GO:0007596	blood coagulation	F9	IDA		Human	PMID:20121197
Biological Process	GO:0007596	blood coagulation	F9	IDA		Human	PMID:2472424
Biological Process	GO:0007596	blood coagulation	F9	IMP		Human	PMID:2592373
Biological Process	GO:0007596	blood coagulation	F9	IMP	MGI:MGI:3055509	Mouse	PMID:15178576
Biological Process	GO:0007596	blood coagulation	F9	IDA		Rat	PMID:10048754|RGD:2290183
Biological Process	GO:0006508	proteolysis	F9	IDA		Human	PMID:20121197
Biological Process	GO:0051238	sequestering of metal ion	F9	EXP		Human	PMID:14722079
Biological Process	GO:0031638	zymogen activation	F9	IDA		Human	PMID:2592373

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern