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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Chat+
wild type
MGI:2430122
Summary 16 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Chat/Slc18a3tm1.1Vpra/Chat+ involves: 129S4/SvJae * C57BL/6J MGI:4367612
ht2
Chattm1(cre)Lowl/Chat+ involves: 129S6/SvEvTac * C57BL/6 MGI:3689725
cn3
Chattm2(cre)Lowl/Chat+
Mapttm2(FUS)Neas/Mapt+
B6.129-Mapttm2(FUS)Neas Chattm2(cre)Lowl MGI:5823845
cn4
Chattm2(cre)Lowl/Chat+
Mapttm3(FUS)Neas/Mapt+
B6.129-Mapttm3(FUS)Neas Chattm2(cre)Lowl MGI:5823858
cn5
Chattm2(cre)Lowl/Chat+
Mapttm3(Sema3e)Arbr/Mapttm3(Sema3e)Arbr
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6 MGI:3848833
cn6
Chattm2(cre)Lowl/Chat+
Mecp2tm2Bird/Y
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6J MGI:6098759
cn7
Chattm2(cre)Lowl/Chat+
Gt(ROSA)26Sortm9(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Sema6aGt(KST069)Byg/Sema6aGt(KST069)Byg
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6NCr MGI:5562538
cn8
Brsk2tm2.1Jrs/Brsk2tm2.1Jrs
Chattm1(cre)Lowl/Chat+
involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ MGI:5524149
cn9
Mc4rtm1Lowl/Mc4rtm1Lowl
Chattm1(cre)Lowl/Chat+
involves: 129S4/SvJae * 129S6/SvEvTac MGI:5484740
cn10
Mecp2tm1Jae/Y
Chattm2(cre)Lowl/Chat+
involves: 129S4/SvJae * 129S6/SvEvTac * C57BL/6 * C57BL/6J MGI:6098756
cn11
Aplp2tm1Dbo/Aplp2tm1Dbo
Apptm1.1Zhe/Apptm1.1Zhe
Chattm2(cre)Lowl/Chat+
involves: 129S6/SvEvTac * 129S7/SvEvBrd * C57BL/6J MGI:4359069
cn12
Fustm1a(EUCOMM)Wtsi/Fustm1c(EUCOMM)Wtsi
Chattm2(cre)Lowl/Chat+
involves: 129S6/SvEvTac * C3H * C57BL/6 * C57BL/6N MGI:5823868
cn13
Chattm2(cre)Lowl/Chat+
Stmn2em2Jmi/Stmn2em2Jmi
involves: 129S6/SvEvTac * C57BL/6J * C57BL/6N MGI:7523313
cn14
Chattm2(cre)Lowl/Chat+
Plxna2tm1a(EUCOMM)Wtsi/Plxna2tm1Hfu
involves: 129S6/SvEvTac * C57BL/6N * CBA/JNCrlj MGI:5562536
cn15
Mc4rtm2Lowl/Mc4rtm2Lowl
Chattm1(cre)Lowl/Chat+
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
involves: 129S6/SvEvTac * C57BL/6NCr MGI:5484737
cn16
Chattm2(cre)Lowl/Chat+
Cpeb2tm1.1Yshu/Cpeb2tm1.1Yshu
involves: C57BL/6 * C57BL/6J * C57BL/6NJ * SJL/J MGI:5882505


Genotype
MGI:4367612
ht1
Allelic
Composition
Chat/Slc18a3tm1.1Vpra/Chat+
Genetic
Background
involves: 129S4/SvJae * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chat/Slc18a3tm1.1Vpra mutation (0 available); any Chat mutation (63 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
homeostasis/metabolism
• increased intracellular acetylcholine level in the brains of adult mice

nervous system
• miniature endplate potential amplitude and frequency are increased compared to in wild-type mice

behavior/neurological
N
• mice exhibit normal grip force, wire-hanging, gait, and locomotion




Genotype
MGI:3689725
ht2
Allelic
Composition
Chattm1(cre)Lowl/Chat+
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm1(cre)Lowl mutation (1 available); any Chat mutation (63 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
normal phenotype
• heterozygotes are viable and fertile; cre recombinase activity is detected in all cholinergic neurons




Genotype
MGI:5823845
cn3
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Mapttm2(FUS)Neas/Mapt+
Genetic
Background
B6.129-Mapttm2(FUS)Neas Chattm2(cre)Lowl
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Mapttm2(FUS)Neas mutation (0 available); any Mapt mutation (453 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• motor neuron loss is seen at P60 but not P30, when 10% of lumbar level 5 (L5) motor neurons are lost and by P360, there are 18.6% fewer motor neurons overall in the L5 segment
• about 10% denervation of the tibialis anterior neuromuscular junctions (NMJs), first seen at P60 which progresses with age such that at P360, about 25% of NMJs are denervated
• denervation is first noted at P120 in the gastrocnemius muscle where about 10% of NMJs are denervated
• however, even at P360, no denervation is seen in the soleus muscle NMJs




Genotype
MGI:5823858
cn4
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Mapttm3(FUS)Neas/Mapt+
Genetic
Background
B6.129-Mapttm3(FUS)Neas Chattm2(cre)Lowl
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Mapttm3(FUS)Neas mutation (0 available); any Mapt mutation (453 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• significant motor neuron loss is seen at P30 but not P10, and by P360, there are 22.6% fewer motor neurons overall in the lumbar level 5 (L5) segment
• about 10% denervation of the tibialis anterior neuromuscular junctions, first seen at P20 which progresses with age such that at P360, about 30% of NMJs are denervated
• denervation is first noted at P120 in the gastrocnemius muscle where about 13% of NMJs are denervated
• however, even at P360, no denervation is seen in the soleus muscle NMJs




Genotype
MGI:3848833
cn5
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Mapttm3(Sema3e)Arbr/Mapttm3(Sema3e)Arbr
Genetic
Background
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Mapttm3(Sema3e)Arbr mutation (0 available); any Mapt mutation (453 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• 23% of triceps motor neurons receive monosynaptic input from triceps afferents compared to 95% in wild-type mice
• however, triceps and cutaneous maximus motor neurons normally lack monosynaptic input from cutaneous maximus afferents

behavior/neurological
N
• mice exhibit no behavior deficits




Genotype
MGI:6098759
cn6
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Mecp2tm2Bird/Y
Genetic
Background
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Mecp2tm2Bird mutation (1 available); any Mecp2 mutation (46 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
respiratory system
• abnormal hypoxic breathing response

behavior/neurological
N
• mice exhibit normal activity

cardiovascular system
N
• mice exhibit a regular heart rate and show rescue of spontaneous and induced cardiac arrhythmias, long QT, and improved survival

homeostasis/metabolism
N
• mice exhibit a regular body temperature




Genotype
MGI:5562538
cn7
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Gt(ROSA)26Sortm9(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Sema6aGt(KST069)Byg/Sema6aGt(KST069)Byg
Genetic
Background
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6NCr
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Gt(ROSA)26Sortm9(CAG-tdTomato)Hze mutation (7 available); any Gt(ROSA)26Sor mutation (1062 available)
Sema6aGt(KST069)Byg mutation (1 available); any Sema6a mutation (84 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• starburst amacrine cells in flat mount retinas show excess and aberrant light-evoked inhibitory postsynaptic currents




Genotype
MGI:5524149
cn8
Allelic
Composition
Brsk2tm2.1Jrs/Brsk2tm2.1Jrs
Chattm1(cre)Lowl/Chat+
Genetic
Background
involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Brsk2tm2.1Jrs mutation (1 available); any Brsk2 mutation (37 available)
Chattm1(cre)Lowl mutation (1 available); any Chat mutation (63 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• type Ia proprioceptive sensory neuron projections grow normally to the ventral horn




Genotype
MGI:5484740
cn9
Allelic
Composition
Mc4rtm1Lowl/Mc4rtm1Lowl
Chattm1(cre)Lowl/Chat+
Genetic
Background
involves: 129S4/SvJae * 129S6/SvEvTac
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm1(cre)Lowl mutation (1 available); any Chat mutation (63 available)
Mc4rtm1Lowl mutation (2 available); any Mc4r mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
cardiovascular system
• develop obesity induced hypertension but only during active period

homeostasis/metabolism
• higher plasma insulin levels




Genotype
MGI:6098756
cn10
Allelic
Composition
Mecp2tm1Jae/Y
Chattm2(cre)Lowl/Chat+
Genetic
Background
involves: 129S4/SvJae * 129S6/SvEvTac * C57BL/6 * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Mecp2tm1Jae mutation (2 available); any Mecp2 mutation (46 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• 67% of mice die early with a median life span of 16 months

cardiovascular system
• irregular heart rhythm and sudden drops in heart rate
• increase in heart rate variability during both the light and dark cycles
• heart rate during the dark cycle is decreased but is not different during the light cycle
• mice show an increased rate of spontaneous ventricular arrhythmias including premature ventricular contractions and nonsustained ventricular tachycardia
• mice show an increased rate of spontaneous ventricular arrhythmias including premature ventricular contractions and nonsustained ventricular tachycardia
• mice are highly susceptible to inducible arrhythmias

homeostasis/metabolism
• mice are highly susceptible to inducible arrhythmias
• mice exhibit decreased temperature during the dark cycle but not the light cycle

behavior/neurological
N
• mice show no differences in activity during the light or dark cycle

respiratory system
N
• mice do not exhibit increased basal apneas or abnormal hypoxic response

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
Rett syndrome DOID:1206 OMIM:312750
OMIM:613454
J:241788




Genotype
MGI:4359069
cn11
Allelic
Composition
Aplp2tm1Dbo/Aplp2tm1Dbo
Apptm1.1Zhe/Apptm1.1Zhe
Chattm2(cre)Lowl/Chat+
Genetic
Background
involves: 129S6/SvEvTac * 129S7/SvEvBrd * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Aplp2tm1Dbo mutation (1 available); any Aplp2 mutation (31 available)
Apptm1.1Zhe mutation (1 available); any App mutation (118 available)
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at P0, presynaptic and postsynaptic terminal distribution is diffuse and nerve terminal sprouting occurs unlike in wild-type mice that is not as severe as in Aplp2tm1Dbo Apptm1.2Zhe double homozygotes




Genotype
MGI:5823868
cn12
Allelic
Composition
Fustm1a(EUCOMM)Wtsi/Fustm1c(EUCOMM)Wtsi
Chattm2(cre)Lowl/Chat+
Genetic
Background
involves: 129S6/SvEvTac * C3H * C57BL/6 * C57BL/6N
Cell Lines EPD0667_5_C04
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Fustm1a(EUCOMM)Wtsi mutation (0 available); any Fus mutation (57 available)
Fustm1c(EUCOMM)Wtsi mutation (0 available); any Fus mutation (57 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• no motor neuron degeneration is seen up to 1 year of age




Genotype
MGI:7523313
cn13
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Stmn2em2Jmi/Stmn2em2Jmi
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6J * C57BL/6N
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Stmn2em2Jmi mutation (0 available); any Stmn2 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• 16.8% of mice are obtained at P21, indicating a significant deviation from Mendelian ratios

behavior/neurological
• at 3 months of age, mice show a significant decrease in the latency time (s) to fall from an inverted screen relative to control mice

nervous system
• mice develop a distal motor neuropathy
• at 3 months of age, lumbrical muscles show a NMJ phenotype similar to that of single constitutive Stmn2em1Jmi homozygotes, where most lumbrical muscle fibers are partially denervated with highly fragmented postsynaptic endplates

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
motor peripheral neuropathy DOID:2477 J:337175




Genotype
MGI:5562536
cn14
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Plxna2tm1a(EUCOMM)Wtsi/Plxna2tm1Hfu
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6N * CBA/JNCrlj
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Plxna2tm1a(EUCOMM)Wtsi mutation (3 available); any Plxna2 mutation (128 available)
Plxna2tm1Hfu mutation (1 available); any Plxna2 mutation (128 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
vision/eye
• the starburst amacrine cell (SAC) processes that normally stratify in 2 discrete inner plexiform laminae (S2 and S4) fail to completely segregate from each other
• disruption of the dendritic plexus organization of On but not Off SACs
• the starburst amacrine cell (SAC) processes that normally stratify in 2 discrete inner plexiform laminae (S2 and S4) fail to completely segregate from each other

nervous system
• the starburst amacrine cell (SAC) processes that normally stratify in 2 discrete inner plexiform laminae (S2 and S4) fail to completely segregate from each other
• disruption of the dendritic plexus organization of On but not Off SACs
• the starburst amacrine cell (SAC) processes that normally stratify in 2 discrete inner plexiform laminae (S2 and S4) fail to completely segregate from each other
• disruption of the dendritic plexus organization of On but not Off SACs




Genotype
MGI:5484737
cn15
Allelic
Composition
Mc4rtm2Lowl/Mc4rtm2Lowl
Chattm1(cre)Lowl/Chat+
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6NCr
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm1(cre)Lowl mutation (1 available); any Chat mutation (63 available)
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze mutation (8 available); any Gt(ROSA)26Sor mutation (1062 available)
Mc4rtm2Lowl mutation (0 available); any Mc4r mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• biophysical properties of cholinergic neurons are normal
• melanotan II fails to hyperpolarize membrane potentials of all dorsal motor nucleus vagal cholinergic neurons
• similar results with Mc4r agonist THIQ




Genotype
MGI:5882505
cn16
Allelic
Composition
Chattm2(cre)Lowl/Chat+
Cpeb2tm1.1Yshu/Cpeb2tm1.1Yshu
Genetic
Background
involves: C57BL/6 * C57BL/6J * C57BL/6NJ * SJL/J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chattm2(cre)Lowl mutation (4 available); any Chat mutation (63 available)
Cpeb2tm1.1Yshu mutation (0 available); any Cpeb2 mutation (36 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
respiratory system
• whole-body plethysmography revealed respiratory defects similar to those observed in Cpeb2tm1.2Yshu homozygotes but with wide individual variation in severity
• however, tidal volume is normal at P1
• aberrant respiration patterns at P1
• reduced respiratory frequency at P1
• increased apneic episodes at P1
• inhalation of nebulized tiotropium, an anticholinergic bronchodilator, reduces apnea frequency to wild-type levels
• significantly increased methacholine-induced airway reactivity in adult mice

homeostasis/metabolism
• increased pulmonary acetylcholine level at P1
• increased choline acetyltransferase (ChAT) expression in the dorsal motor nucleus of vagus (DMNV)





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last database update
01/06/2026
MGI 6.24
The Jackson Laboratory