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Tgfbr1 Gene Detail
Summary
  • Symbol
    Tgfbr1
  • Name
    transforming growth factor, beta receptor I
  • Synonyms
    Alk-5, ALK5, TbetaRI, TbetaR-I
  • Feature Type
    protein coding gene
  • IDs
    MGI:98728
    NCBI Gene: 21812
  • Gene Overview
    MyGene.info: TGFBR1
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:47353222-47414926 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 26.02 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    164 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98728
protein coding gene Chr4:47353222-47414931 (.)
129S1/SvImJ MGP_129S1SvImJ_G0028267
protein coding gene Chr4:45733278-45794892 (+)
A/J MGP_AJ_G0028226
protein coding gene Chr4:44009013-44071238 (+)
AKR/J MGP_AKRJ_G0028176
protein coding gene Chr4:45123712-45184935 (+)
BALB/cJ MGP_BALBcJ_G0028246
protein coding gene Chr4:44132419-44193653 (+)
C3H/HeJ MGP_C3HHeJ_G0027967
protein coding gene Chr4:45717731-45781435 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028687
protein coding gene Chr4:47411724-47476189 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025996
protein coding gene Chr4:41389917-41450372 (+)
CAST/EiJ MGP_CASTEiJ_G0027406
protein coding gene Chr4:45298383-45389494 (+)
CBA/J MGP_CBAJ_G0027933
protein coding gene Chr4:48920685-48984505 (+)
DBA/2J MGP_DBA2J_G0028083
protein coding gene Chr4:43915196-43975759 (+)
FVB/NJ MGP_FVBNJ_G0028050
protein coding gene Chr4:43180724-43246018 (+)
LP/J MGP_LPJ_G0028182
protein coding gene Chr4:45785626-45844236 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028074
protein coding gene Chr4:51956953-52020600 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028722
protein coding gene Chr4:45347743-45410919 (+)
PWK/PhJ MGP_PWKPhJ_G0027131
protein coding gene Chr4:44026424-44089182 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026959
protein coding gene Chr4:44850390-44911524 (+)
WSB/EiJ MGP_WSBEiJ_G0027484
protein coding gene Chr4:45268011-45329686 (+)



Homology
more
  • Human Ortholog
    TGFBR1, transforming growth factor beta receptor 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    TGFBR1, transforming growth factor beta receptor 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    AAT5, ACVRLK4, ALK5, ALK-5, ESS1, LDS1, LDS1A, LDS2A, MSSE, SKR4, tbetaR-I, TBR-i, TBRI, TGFR-1
  • Links
    NCBI Gene ID: 7046
    neXtProt AC: NX_P36897
    UniProt: P36897

  • Chr Location
    9q22.33; chr9:99104038-99154192 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    2 with Tgfbr1 mouse models

Human Disease Mouse Models
      
IDs
View 1 model
IDs
View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    3 with disease annotations
  • References
    4 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    66 phenotypes from 11 alleles in 16 genetic backgrounds
    20 phenotypes from multigenic genotypes
    1 images
    96 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygotes for some targeted null mutations exhibit defects of the yolk sac and placenta, lack circulating erythrocytes, and die at midgestation. Mutant endothelial cells show enhanced proliferation, improper migration, and reduced fibronectin production.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 21812 NCBI Gene Model | MGI Sequence Detail 61705 C57BL/6J ±  kb
    transcript NM_009370 RefSeq | MGI Sequence Detail 5779 C57BL/6  
    polypeptide Q64729 UniProt | EBI | MGI Sequence Detail 503 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 170
      cDNA 153
      Primer pair 13
      Other 4

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGD-MRK-15070, MGI:2140434
    References
    more
    • Summaries
      All 260
      Developmental Gene Expression 78
      Diseases 4
      Gene Ontology 36
      Phenotypes 96
    • Earliest
      J:16378 Segarini PR, TGF-beta receptors: a complicated system of multiple binding proteins. Biochim Biophys Acta. 1993 Dec 23;1155(3):269-75
    • Latest
      J:264375 Bird TG, et al., TGFbeta inhibition restores a regenerative response in acute liver injury by suppressing paracrine senescence. Sci Transl Med. 2018 Aug 15;10(454)

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    12/11/2018
    MGI 6.13
    The Jackson Laboratory