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Olfr1042 Gene Detail
Summary
  • Symbol
    Olfr1042
  • Name
    olfactory receptor 1042
  • Synonyms
    GA_x6K02T2Q125-47629317-47628376, MOR185-10
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030876
    NCBI Gene: 257941
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:86159345-86160441 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 49.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030876
protein coding gene Chr2:86156743-86161838 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025956
protein coding gene Chr2:86989397-86990338 (-)
A/J MGP_AJ_G0025926
protein coding gene Chr2:83539714-83540655 (-)
AKR/J MGP_AKRJ_G0025896
protein coding gene Chr2:85757295-85761010 (-)
BALB/cJ MGP_BALBcJ_G0025928
protein coding gene Chr2:83737153-83738180 (-)
C3H/HeJ MGP_C3HHeJ_G0025684
protein coding gene Chr2:86000351-86002577 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026375
protein coding gene Chr2:89753138-89755857 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023779
protein coding gene Chr2:80291616-80292557 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0025665
protein coding gene Chr2:92826453-92827394 (-)
DBA/2J MGP_DBA2J_G0025796
protein coding gene Chr2:83074548-83075489 (-)
FVB/NJ MGP_FVBNJ_G0025758
protein coding gene Chr2:82282544-82283440 (-)
LP/J MGP_LPJ_G0025893
protein coding gene Chr2:86932775-86935189 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025788
protein coding gene Chr2:95254469-95255410 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026430
protein coding gene Chr2:85996252-85997193 (-)
PWK/PhJ MGP_PWKPhJ_G0024888
protein coding gene Chr2:82989726-82990667 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024695
protein coding gene Chr2:86071912-86072853 (-)
WSB/EiJ MGP_WSBEiJ_G0025216
protein coding gene Chr2:86662384-86663325 (-)



Homology
more
  • Human Ortholog
    OR5AL1, olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)
  • Vertebrate Orthologs
    4
  • Human Ortholog
    OR5AL1, olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)
    Orthology source: HGNC
  • Synonyms
    OR5AL1P
  • Links
    NCBI Gene ID: 79482
    UniProt: P0C617

  • Chr Location
    11q12.1; chr11:56412697-56413681 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 257941 NCBI Gene Model | MGI Sequence Detail 1097 C57BL/6J ±  kb
transcript NM_001011777 RefSeq | MGI Sequence Detail 1097 C57BL/6  
polypeptide NP_001011777 RefSeq | MGI Sequence Detail 313 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 16
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory