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Tmtc4 Gene Detail
Summary
  • Symbol
    Tmtc4
  • Name
    transmembrane and tetratricopeptide repeat containing 4
  • Synonyms
    4930403J22Rik, 5730419O14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921050
    NCBI Gene: 70551
  • Gene Overview
    MyGene.info: TMTC4
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:122918971-122983282 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 66.04 cM, cytoband E5
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    256 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921050
protein coding gene Chr14:122918971-122984035 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021676
protein coding gene Chr14:120836926-120905158 (-)
A/J MGP_AJ_G0021636
protein coding gene Chr14:116162104-116232578 (-)
AKR/J MGP_AKRJ_G0021612
protein coding gene Chr14:119910612-119977360 (-)
BALB/cJ MGP_BALBcJ_G0021642
protein coding gene Chr14:116708718-116773226 (-)
C3H/HeJ MGP_C3HHeJ_G0021419
protein coding gene Chr14:119809189-119873553 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022082
protein coding gene Chr14:125487555-125557074 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019620
protein coding gene Chr14:111977538-112041171 (-)
CAST/EiJ MGP_CASTEiJ_G0020935
protein coding gene Chr14:117701547-117767794 (-)
CBA/J MGP_CBAJ_G0021388
protein coding gene Chr14:130250620-130324170 (-)
DBA/2J MGP_DBA2J_G0021511
protein coding gene Chr14:116012208-116076399 (-)
FVB/NJ MGP_FVBNJ_G0021489
protein coding gene Chr14:114366983-114431673 (-)
LP/J MGP_LPJ_G0021579
protein coding gene Chr14:121743104-121809321 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021516
protein coding gene Chr14:135222633-135289483 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022105
protein coding gene Chr14:119495384-119562613 (-)
PWK/PhJ MGP_PWKPhJ_G0020679
protein coding gene Chr14:113062922-113129443 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020517
protein coding gene Chr14:115683310-115755418 (-)
WSB/EiJ MGP_WSBEiJ_G0020991
protein coding gene Chr14:120182714-120248643 (-)



Homology
more
  • Human Ortholog
    TMTC4, transmembrane and tetratricopeptide repeat containing 4
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TMTC4, transmembrane and tetratricopeptide repeat containing 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84899
    neXtProt AC: NX_Q5T4D3
    UniProt: Q5T4D3

  • Chr Location
    13q32.3; chr13:100603836-100675025 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 70551 NCBI Gene Model | MGI Sequence Detail 64312 C57BL/6J ±  kb
transcript NM_001360598 RefSeq | MGI Sequence Detail 3631 C57BL/6  
polypeptide Q8BG19 UniProt | EBI | MGI Sequence Detail 741 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 47
    cDNA 46
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1917801
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory