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Ppara Gene Detail
Summary
  • Symbol
    Ppara
  • Name
    peroxisome proliferator activated receptor alpha
  • Synonyms
    4933429D07Rik, Nr1c1, Ppar, PPARalpha, PPAR-alpha
  • Feature Type
    protein coding gene
  • IDs
    MGI:104740
    NCBI Gene: 19013
  • Alliance
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:85619184-85687020 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 15, 40.42 cM
  • Mapping Data
    17 experiments
Strain
Comparison
more
  • SNPs within 2kb
    831 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104740
protein coding gene Chr15:85619112-85691052 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022194
protein coding gene Chr15:86636695-86713025 (+)
A/J MGP_AJ_G0022153
protein coding gene Chr15:83401204-83471275 (+)
AKR/J MGP_AKRJ_G0022128
protein coding gene Chr15:85868740-85939217 (+)
BALB/cJ MGP_BALBcJ_G0022159
protein coding gene Chr15:83527881-83596759 (+)
C3H/HeJ MGP_C3HHeJ_G0021929
protein coding gene Chr15:85803114-85877166 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022604
protein coding gene Chr15:89883354-89956391 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020129
protein coding gene Chr15:79722279-79790076 (+)
CAST/EiJ MGP_CASTEiJ_G0021451
protein coding gene Chr15:86612845-86685721 (+)
CBA/J MGP_CBAJ_G0021896
protein coding gene Chr15:92866726-92957426 (+)
DBA/2J MGP_DBA2J_G0022023
protein coding gene Chr15:82864052-82932983 (+)
FVB/NJ MGP_FVBNJ_G0022002
protein coding gene Chr15:81937803-82011480 (+)
LP/J MGP_LPJ_G0022094
protein coding gene Chr15:86805307-86877284 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022022
protein coding gene Chr15:97542057-97618120 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022619
protein coding gene Chr15:85860871-85938116 (+)
PWK/PhJ MGP_PWKPhJ_G0021192
protein coding gene Chr15:82878721-82948710 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021026
protein coding gene Chr15:85570279-85649428 (+)
WSB/EiJ MGP_WSBEiJ_G0021500
protein coding gene Chr15:86366089-86434981 (+)



Homology
more
  • Human Ortholog
    PPARA, peroxisome proliferator activated receptor alpha
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PPARA, peroxisome proliferator activated receptor alpha
  • Synonyms
    hPPAR, NR1C1, PPAR, PPARalpha, PPAR-alpha
  • Links
    NCBI Gene ID: 5465
    neXtProt AC: NX_Q07869
    UniProt: Q07869

  • Chr Location
    22q13.31; chr22:46150521-46243756 (+)  GRCh38

Human Diseases
more
  • Diseases
    1 with Ppara mouse models; 5 with human PPARA associations

Human Disease Mouse Models
      
IDs
View 1 model
      
IDs
IDs
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    3 with disease annotations
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    53 phenotypes from 3 alleles in 9 genetic backgrounds
    25 phenotypes from multigenic genotypes
    2 images
    444 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygotes for a targeted null mutation exhibit loss of diurnal variation in hepatic fatty acid and cholesterol synthesis, increased hepatic lipid and gonadal adipose stores, impaired skin wound healing, and altered metabolic responses to starvation.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000022383 Ensembl Gene Model | MGI Sequence Detail 67837 C57BL/6J ±  kb
    transcript ENSMUST00000109423 Ensembl | MGI Sequence Detail 2519 Not Applicable  
    polypeptide ENSMUSP00000105050 Ensembl | MGI Sequence Detail 468 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • Protein Ontology
      PR:000013056 peroxisome proliferator-activated receptor alpha
    • InterPro Domains
      IPR001723 Nuclear hormone receptor
      IPR000536 Nuclear hormone receptor, ligand-binding domain
      IPR035500 Nuclear hormone receptor-like domain superfamily
      IPR003074 Peroxisome proliferator-activated receptor
      IPR003076 Peroxisome proliferator-activated receptor alpha
      IPR013088 Zinc finger, NHR/GATA-type
      IPR001628 Zinc finger, nuclear hormone receptor-type
    Molecular
    Reagents
    less
    • All nucleic 62
      Genomic 4
      cDNA 44
      Primer pair 11
      Other 3

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGD-MRK-13588, MGD-MRK-28031, MGI:2145949, MGI:2146246, MGI:3026969
    References
    more
    • Summaries
      All 740
      Developmental Gene Expression 62
      Diseases 3
      Gene Ontology 29
      Phenotypes 444
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:344972 Badmus OO, et al., Loss of hepatic PPARalpha in mice causes hypertension and cardiovascular disease. Am J Physiol Regul Integr Comp Physiol. 2023 Jul 1;325(1):R81-R95

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    03/12/2024
    MGI 6.23
    The Jackson Laboratory