Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX10
  • Mouse genes Snx10
  • Rat genes Snx10
  • Zfish genes snx10a,snx10b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx10

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005545	1-phosphatidylinositol binding	SNX10	IMP		Human	PMID:17012226
Molecular Function	GO:0051117	ATPase binding	SNX10	IPI	UniProtKB:Q9Y5K8	Human	PMID:21844891
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:Q15041	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:O95070	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:Q15041	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:Q9UI14	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:P17252	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:P61981	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:Q15047-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SNX10	IPI	UniProtKB:Q92993	Human	PMID:32814053
Cellular Component	GO:0090651	apical cytoplasm	Snx10	IDA		Mouse	PMID:25811986
Cellular Component	GO:0005813	centrosome	SNX10	IDA		Human	PMID:21844891
Cellular Component	GO:0005783	endoplasmic reticulum	SNX10	IDA		Human	PMID:22174188
Cellular Component	GO:0005783	endoplasmic reticulum	Snx10	IDA		Mouse	MGI:MGI:5317512|PMID:22174188
Cellular Component	GO:0031313	extrinsic component of endosome membrane	SNX10	IDA		Human	PMID:17012226
Cellular Component	GO:0005634	nucleus	SNX10	IDA		Human	PMID:22174188
Cellular Component	GO:0005634	nucleus	Snx10	IDA		Mouse	MGI:MGI:5317512|PMID:22174188
Cellular Component	GO:0030141	secretory granule	Snx10	IDA		Mouse	PMID:25811986
Biological Process	GO:0035630	bone mineralization involved in bone maturation	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0046849	bone remodeling	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0045453	bone resorption	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0055074	calcium ion homeostasis	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0019725	cellular homeostasis	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Snx10	IEP		Mouse	PMID:20439489
Biological Process	GO:0060271	cilium assembly	SNX10	IMP		Human	PMID:21844891
Biological Process	GO:0060271	cilium assembly	snx10a	IMP		Zfish	PMID:21844891|ZFIN:ZDB-PUB-110817-6
Biological Process	GO:0060271	cilium assembly	snx10a	IMP	ZFIN:ZDB-MRPHLNO-131126-6	Zfish	PMID:21844891
Biological Process	GO:0006897	endocytosis	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0007032	endosome organization	SNX10	IMP		Human	PMID:17012226
Biological Process	GO:0051649	establishment of localization in cell	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0001696	gastric acid secretion	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0001947	heart looping	snx10a	IMP	ZFIN:ZDB-MRPHLNO-131126-6	Zfish	PMID:21844891
Biological Process	GO:0001947	heart looping	snx10a	IGI	ZFIN:ZDB-MRPHLNO-131126-6,ZFIN:ZDB-MRPHLNO-131126-9	Zfish	PMID:21844891
Biological Process	GO:0070121	Kupffer's vesicle development	snx10a	IMP		Zfish	PMID:21844891|ZFIN:ZDB-PUB-110817-6
Biological Process	GO:0070986	left/right axis specification	snx10a	IMP		Zfish	PMID:21844891|ZFIN:ZDB-PUB-110817-6
Biological Process	GO:0070986	left/right axis specification	snx10a	IMP	ZFIN:ZDB-MRPHLNO-131126-6	Zfish	PMID:21844891
Biological Process	GO:0030316	osteoclast differentiation	Snx10	IMP		Mouse	MGI:MGI:5317512|PMID:22174188
Biological Process	GO:0071539	protein localization to centrosome	SNX10	IMP		Human	PMID:21844891
Biological Process	GO:0061512	protein localization to cilium	SNX10	IMP		Human	PMID:21844891
Biological Process	GO:0097178	ruffle assembly	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986
Biological Process	GO:0044691	tooth eruption	Snx10	IMP	MGI:MGI:5690193	Mouse	PMID:25811986

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern