Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PSD
  • Mouse genes Psd
  • Rat genes Psd
  • Zfish genes psda
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Psd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	PSD	IDA		Human	PMID:23603394
Molecular Function	GO:0005515	protein binding	PSD	IPI	UniProtKB:P70398	Human	PMID:20339350
Molecular Function	GO:0005515	protein binding	Psd	IPI	UniProtKB:Q9CY18|UniProtKB:Q9WV80	Mouse	MGI:MGI:5562465|PMID:24261326
Cellular Component	GO:0032154	cleavage furrow	PSD	IDA		Human	PMID:23603394
Cellular Component	GO:0043197	dendritic spine	Psd	IDA		Mouse	MGI:MGI:5562465|PMID:24261326
Cellular Component	GO:0016020	membrane	Psd	IDA		Rat	PMID:15009133|RGD:1303370
Cellular Component	GO:0014069	postsynaptic density	Psd	IDA		Mouse	MGI:MGI:5562465|PMID:24261326
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Psd	IEP		Mouse	PMID:24261326
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Psd	IDA		Mouse	PMID:24261326
Cellular Component	GO:0032587	ruffle membrane	PSD	IDA		Human	PMID:23603394
Biological Process	GO:0030182	neuron differentiation	Psd	IEP		Rat	PMID:11834294|RGD:632586
Biological Process	GO:0031175	neuron projection development	Psd	IDA		Mouse	MGI:MGI:5562465|PMID:24261326
Biological Process	GO:0150052	regulation of postsynapse assembly	Psd	IDA		Rat	PMID:16672654|RGD:8554141
Biological Process	GO:0150052	regulation of postsynapse assembly	Psd	IMP		Rat	PMID:16672654|RGD:8554141

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern