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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Sox17+
wild type
MGI:2179997
Summary 9 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Sox17tm1Ysk/Sox17+ B6.129S1-Sox17tm1Ysk MGI:6113926
ht2
Sox17SHIVA/Sox17+ either: C57BL/6-Sox17SHIVA or (involves: C57BL/6 * C3H/HeN) MGI:5751539
ht3
Sox17tm1Ysk/Sox17+ involves: 129S1/Sv * C57BL/6 MGI:6113921
cn4
NipblGt(EUCE313f02)1.1Hmgu/Nipbl+
Sox17tm2.1(icre)Heli/Sox17+
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6J * CD-1 MGI:7492228
cn5
NipblGt(EUCE313f02)Hmgu/Nipbl+
Sox17tm2.1(icre)Heli/Sox17+
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6J * CD-1 MGI:7492242
cn6
Sox17tm2Sjm/Sox17+
Tg(Pdx1-cre)6Tuv/0
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * FVB/N MGI:6113948
cn7
Gt(ROSA)26Sortm1(CAG-Etv2,-GFP)Hkata/Gt(ROSA)26Sor+
Sox17tm1(icre)Heli/Sox17+
involves: 129S2/SvPas * C57BL/6NCrlj * CBA/JNCrlj MGI:5527438
cn8
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Rr271em1Mgn/Rr271+
Sox17tm2(EGFP/cre)Mgn/Sox17+
involves: 129S6/SvEvTac * C57BL/6NCrl * CD-1 MGI:7339251
cx9
Shhtm1(EGFP/cre)Cjt/Shh+
Sox17tm1Ysk/Sox17+
involves: 129S1/Sv * C57BL/6 MGI:6113949


Genotype
MGI:6113926
ht1
Allelic
Composition
Sox17tm1Ysk/Sox17+
Genetic
Background
B6.129S1-Sox17tm1Ysk
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sox17tm1Ysk mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
muscle
• formation of smooth muscle layers in gallbladders is delayed and defective with smooth muscle cells distributed randomly and irregularly with a swirling pattern distinct from wild-type mice at E17
• E13.5 gallbladder explants grown in an in vitro culture system show poor development of the smooth muscle layer

mortality/aging
• perinatal lethality in about 90% of pups after the N5 generation of the backcross onto C57BL/6
• mice maintained at F8-9 backcross to C57BL/6 show approximate 70% neonatal lethality; remaining mice survive to adulthood

liver/biliary system
• defects in development of the bile duct systems during late-organogenic stages
• 21 of 22 fetuses show ectopic extrahepatic ducts in the cystic duct region
• defects in development of the gallbladder during late-organogenic stages (J:194071)
• gallbladder hypoplasia is seen in almost all fetuses and is seen as early as E15.5 (J:194071)
• however, lung, pancreas, esophagus, stomach, duodenum and intestine appear normal (J:194071)
• severe hypotrophy of the gallbladder (J:241569)
• E13.5 gallbladder explants grown in an in vitro culture system show poor development with only a single-layered cuboidal epithelium without any epithelial fold formation and poor development of the smooth muscle layer (J:241569)
• gallbladder explants incubated with SHH-soaked beads show rescue of the gallbladder developmental defects (J:241569)
• hypoplasia of the gallbladder epithelium as early as E15.5-16.5 (J:194071)
• gallbladder forms a hypotrophic, single-layered cuboidal epithelium with no epithelial fold formation by E17.5 and reduced height compared to a pseudostratified columnar epithelium in wild-type mice (J:194071)
• PCNA-positive indices and Ki-67 and BrdU-labeling indices in the gallbladder epithelia are reduced at E15.5 (J:194071)
• epithelial cell deciduation in the gallbladder (J:194071)
• frequencies of primary cilia in the gallbladder epithelia are increased (J:194071)
• organ culture of gallbladder primordia shows defective elongation and shredding of epithelial cells in bile duct epithelia (J:194071)
• gallbladder epithelium exhibits cystic duct-like phenotypes (J:241569)
• in surviving adults
• formation of smooth muscle layers in gallbladders is delayed and defective with smooth muscle cells distributed randomly and irregularly with a swirling pattern distinct from wild-type mice at E17
• E13.5 gallbladder explants grown in an in vitro culture system show poor development of the smooth muscle layer
• marker analysis indicates perinatal onset of hepatic inflammation in livers during E16.5-E17.5 indicating acute hepatitis in fetuses
• Background Sensitivity: hepatitis is more severe on the C57BL/6 background than on a mixed background
• defects in development of liver during late-organogenic stages
• 62.5% of fetuses backcrossed to C57BL/6 for 7-8 generations show peripheral degeneration of liver lobules with varying severity at E17.5
• peripheral degeneration of liver lobules is first seen at E16.5-E17 and degeneration rapidly expands toward the central proximal region of the lobules
• endoplasmic reticulum enlargement in the cytoplasmic region facing the bile canaliculi in the hepatocytes around the degenerative region
• liver weight is reduced at E16.5
• development of cholestasis at E16.5-17.5 (J:194071)
• gallbladder epithelial cells are occasionally detached from the gallbladder wall and accumulate inside the lumina of the cystic and extrahepatic duct where these cells cause stenosis and atresia in the cystic and extrahepatic ducts to varying degrees
• KCl treatment causes no contraction of the fetal gallbladder at E17.5 in mildly and severely affected mutants, while in the severely affected mice, KCl-induced contraction is reduced
• -autonomous gallbladder contraction is reduced at E17.5
• marker analysis indicates onset of cholecytitis in gallbladder during fetal stages

endocrine/exocrine glands
• defects in development of the bile duct systems during late-organogenic stages
• 21 of 22 fetuses show ectopic extrahepatic ducts in the cystic duct region
• defects in development of the gallbladder during late-organogenic stages (J:194071)
• gallbladder hypoplasia is seen in almost all fetuses and is seen as early as E15.5 (J:194071)
• however, lung, pancreas, esophagus, stomach, duodenum and intestine appear normal (J:194071)
• severe hypotrophy of the gallbladder (J:241569)
• E13.5 gallbladder explants grown in an in vitro culture system show poor development with only a single-layered cuboidal epithelium without any epithelial fold formation and poor development of the smooth muscle layer (J:241569)
• gallbladder explants incubated with SHH-soaked beads show rescue of the gallbladder developmental defects (J:241569)
• hypoplasia of the gallbladder epithelium as early as E15.5-16.5 (J:194071)
• gallbladder forms a hypotrophic, single-layered cuboidal epithelium with no epithelial fold formation by E17.5 and reduced height compared to a pseudostratified columnar epithelium in wild-type mice (J:194071)
• PCNA-positive indices and Ki-67 and BrdU-labeling indices in the gallbladder epithelia are reduced at E15.5 (J:194071)
• epithelial cell deciduation in the gallbladder (J:194071)
• frequencies of primary cilia in the gallbladder epithelia are increased (J:194071)
• organ culture of gallbladder primordia shows defective elongation and shredding of epithelial cells in bile duct epithelia (J:194071)
• gallbladder epithelium exhibits cystic duct-like phenotypes (J:241569)
• in surviving adults
• formation of smooth muscle layers in gallbladders is delayed and defective with smooth muscle cells distributed randomly and irregularly with a swirling pattern distinct from wild-type mice at E17
• E13.5 gallbladder explants grown in an in vitro culture system show poor development of the smooth muscle layer

homeostasis/metabolism
• levels of serum ALT are elevated at E17
• serum levels of ALP are elevated at E17
• intrahepatic levels of bile acids is elevated in livers at E17

immune system
• marker analysis indicates onset of cholecytitis in gallbladder during fetal stages
• marker analysis indicates perinatal onset of hepatic inflammation in livers during E16.5-E17.5 indicating acute hepatitis in fetuses
• Background Sensitivity: hepatitis is more severe on the C57BL/6 background than on a mixed background

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
biliary atresia DOID:13608 OMIM:210500
J:194071 , J:241569




Genotype
MGI:5751539
ht2
Allelic
Composition
Sox17SHIVA/Sox17+
Genetic
Background
either: C57BL/6-Sox17SHIVA or (involves: C57BL/6 * C3H/HeN)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sox17SHIVA mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
cellular
• 2-fold reduction in liver peroxisomes

endocrine/exocrine glands
• partial atrophy of ovaries

growth/size/body

homeostasis/metabolism
• 14 hours, but not 48 hours, after fasting, mutants are more hypoglycemic than controls
• 48 hours after fasting, mutants show impaired production of ketone bodies, producing reduced beta-hydroxybutyrate levels
• mice exhibit lower HDL cholesterol levels
• reduction in serum pantetheinase levels
• in the fed condition, mice exhibit lower levels of triglycerides in the liver-derived VLDL fraction
• however, after fasting, triglyceride levels are similar to wild-type levels
• mice show impaired metabolic adaptation to fasting
• impaired lipid metabolism under fed conditions and reduced adaptation to fasting
• fenofibrate treatment of fasted mice does not lower liver steatosis as it does in wild-type mice

liver/biliary system
• in the fed condition, mice exhibit lower levels of triglycerides in the liver-derived VLDL fraction
• however, after fasting, triglyceride levels are similar to wild-type levels

reproductive system
• partial atrophy of ovaries




Genotype
MGI:6113921
ht3
Allelic
Composition
Sox17tm1Ysk/Sox17+
Genetic
Background
involves: 129S1/Sv * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sox17tm1Ysk mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
endocrine/exocrine glands
• Background Sensitivity: ectopic hepatic duct phenotypes are milder on the mixed background compared to on a C57BL/6 background
• gallbladder hypoplasia is seen in almost all adults

immune system
• Background Sensitivity: hepatitis phenotypes are milder on the mixed background compared to on a C57BL/6 background

liver/biliary system
• Background Sensitivity: ectopic hepatic duct phenotypes are milder on the mixed background compared to on a C57BL/6 background
• gallbladder hypoplasia is seen in almost all adults
• Background Sensitivity: hepatitis phenotypes are milder on the mixed background compared to on a C57BL/6 background




Genotype
MGI:7492228
cn4
Allelic
Composition
NipblGt(EUCE313f02)1.1Hmgu/Nipbl+
Sox17tm2.1(icre)Heli/Sox17+
Genetic
Background
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6J * CD-1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
NipblGt(EUCE313f02)1.1Hmgu mutation (0 available); any Nipbl mutation (126 available)
Sox17tm2.1(icre)Heli mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
cardiovascular system
• heart size is similar to wild-type
• in 26% of hearts at E17.5

growth/size/body
• body size is similar to wild-type




Genotype
MGI:7492242
cn5
Allelic
Composition
NipblGt(EUCE313f02)Hmgu/Nipbl+
Sox17tm2.1(icre)Heli/Sox17+
Genetic
Background
involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6J * CD-1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
NipblGt(EUCE313f02)Hmgu mutation (0 available); any Nipbl mutation (126 available)
Sox17tm2.1(icre)Heli mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
cardiovascular system
• 5% of hearts show an atrial septal defect, statistically indistinguishable from wild-type
• correlates to body size

growth/size/body




Genotype
MGI:6113948
cn6
Allelic
Composition
Sox17tm2Sjm/Sox17+
Tg(Pdx1-cre)6Tuv/0
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * FVB/N
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sox17tm2Sjm mutation (1 available); any Sox17 mutation (29 available)
Tg(Pdx1-cre)6Tuv mutation (3 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
endocrine/exocrine glands
• embryos show varying degrees of shortening of the cystic duct
• embryos exhibit biliary atresia-like phenotypes such as epithelial deciduation and bile duct stenosis/atresia
• epithelial deciduation in the gallbladder
• embryos show varying degrees of shortening of the gallbladder

immune system
• hepatitis in fetuses with normal or mild gallbladder abnormalities but not hepatitis in fetuses with complete lack of the gallbladder

liver/biliary system
• embryos show varying degrees of shortening of the cystic duct
• embryos exhibit biliary atresia-like phenotypes such as epithelial deciduation and bile duct stenosis/atresia
• epithelial deciduation in the gallbladder
• embryos show varying degrees of shortening of the gallbladder
• hepatitis in fetuses with normal or mild gallbladder abnormalities but not hepatitis in fetuses with complete lack of the gallbladder
• 4/55 embryos exhibit severe gross hepatic lesions
• bile duct stenosis




Genotype
MGI:5527438
cn7
Allelic
Composition
Gt(ROSA)26Sortm1(CAG-Etv2,-GFP)Hkata/Gt(ROSA)26Sor+
Sox17tm1(icre)Heli/Sox17+
Genetic
Background
involves: 129S2/SvPas * C57BL/6NCrlj * CBA/JNCrlj
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gt(ROSA)26Sortm1(CAG-Etv2,-GFP)Hkata mutation (0 available); any Gt(ROSA)26Sor mutation (1243 available)
Sox17tm1(icre)Heli mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
mortality/aging
N
• mice are obtained in normal Mendelian ratios

embryo
N
• mice develop without phenotypic abnormalities during embryogenesis




Genotype
MGI:7339251
cn8
Allelic
Composition
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Rr271em1Mgn/Rr271+
Sox17tm2(EGFP/cre)Mgn/Sox17+
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6NCrl * CD-1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze mutation (8 available); any Gt(ROSA)26Sor mutation (1243 available)
Rr271em1Mgn mutation (1 available); any Rr271 mutation (3 available)
Sox17tm2(EGFP/cre)Mgn mutation (1 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
digestive/alimentary system
• absence of ventral pancreato-biliary bud

embryo
• growth retardation from E9.5
• degraded posterior body trunk at E9.5

growth/size/body
• growth retardation from E9.5
• degraded posterior body trunk at E9.5




Genotype
MGI:6113949
cx9
Allelic
Composition
Shhtm1(EGFP/cre)Cjt/Shh+
Sox17tm1Ysk/Sox17+
Genetic
Background
involves: 129S1/Sv * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Shhtm1(EGFP/cre)Cjt mutation (2 available); any Shh mutation (50 available)
Sox17tm1Ysk mutation (0 available); any Sox17 mutation (29 available)
♀ phenotype observed in females
♂ phenotype observed in males
N normal phenotype
endocrine/exocrine glands
• formation of smooth muscle layers in gallbladders is more severely delayed and defective than in either single mutant

muscle
• formation of smooth muscle layers in gallbladders is more severely delayed and defective than in either single mutant

liver/biliary system
• formation of smooth muscle layers in gallbladders is more severely delayed and defective than in either single mutant





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last database update
10/06/2026
MGI 6.29
The Jackson Laboratory