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Or5al1 Gene Detail
Summary
  • Symbol
    Or5al1
  • Name
    olfactory receptor family 5 subfamily AL member 1
  • Synonyms
    GA_x6K02T2Q125-47629317-47628376, MOR185-10, Olfr1042
Location &
Maps
more
  • Sequence Map
    Chr2:85989689-85990785 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030876
 protein coding gene Chr2:85987087-85992182 (-)
129S1/SvImJ ENSMUSG00200050828
 protein coding gene Chr2:83008129-83013224 (-)
A/J ENSMUSG00195046955
 protein coding gene Chr2:83071155-83076251 (-)
AKR/J ENSMUSG00220051766
 protein coding gene Chr2:82949883-82954979 (-)
BALB/cJ ENSMUSG00180054598
 protein coding gene Chr2:82998873-83003969 (-)
C3H/HeJ ENSMUSG00175053331
 protein coding gene Chr2:83136948-83142044 (-)
C57BL/6NJ ENSMUSG00215051867
 protein coding gene Chr2:83093214-83098309 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023779
 protein coding gene Chr2:80291616-80292557 (-)
CAST/EiJ ENSTCUG00005052174
 protein coding gene Chr2:82520600-82525694 (-)
CBA/J ENSMUSG00210028509
 protein coding gene Chr2:83164839-83169935 (-)
DBA/2J ENSMUSG00185056639
 protein coding gene Chr2:82995103-83000199 (-)
FVB/NJ ENSMUSG00205048641
 protein coding gene Chr2:82360815-82365909 (-)
JF1/MsJ ENSUMUG00000005485
 protein coding gene Chr2:82948596-82953633 (-)
LP/J ENSMUSG00230043275
 protein coding gene Chr2:84746105-84751201 (-)
NOD/ShiLtJ ENSMUSG00190045624
 protein coding gene Chr2:83060801-83065897 (-)
NZO/HlLtJ ENSMUSG00225050436
 protein coding gene Chr2:92655874-92660970 (-)
PWK/PhJ ENSLUMG00010046007
 protein coding gene Chr2:82971768-82976805 (-)
SPRET/EiJ ENSMSPG00010051837
 protein coding gene Chr2:84932827-84936630 (-)
WSB/EiJ ENSIUOG00005051490
 protein coding gene Chr2:82984073-82989167 (-)



Homology
more
  • Human Ortholog
    OR5AL1, olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR5AL1, olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)
  • Synonyms
    OR5AL1P
  • Links
    NCBI Gene ID: 79482
    UniProt: P0C617

  • Chr Location
    11q12.1; chr11:56412696-56413683 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 257941 NCBI Gene Model | MGI Sequence Detail 1097 C57BL/6J ±  kb
transcript NM_001011777 RefSeq | MGI Sequence Detail 1097 C57BL/6  
polypeptide NP_001011777 RefSeq | MGI Sequence Detail 313 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:7276310
References
more
  • Summaries
    All 22
    Gene Ontology 6
    Phenotypes 6
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory