About   Help   FAQ
Itgb2 Gene Detail
Summary
  • Symbol
    Itgb2
  • Name
    integrin beta 2
  • Synonyms
    2E6, Cd18, Mac-1 beta
  • Feature Type
    protein coding gene
  • IDs
    MGI:96611
    NCBI Gene: 16414
  • Gene Overview
    MyGene.info: ITGB2
  • Alliance
    gene page
Location & Maps
more
  • Sequence Map
    Chr10:77530252-77565708 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      35457 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    15 experiments
Homology
more
  • Human Ortholog
    ITGB2, integrin subunit beta 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ITGB2, integrin subunit beta 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CD18, LAD, LCAMB, LFA-1, MAC-1, MF17, MFI7
  • Links
    NCBI Gene ID: 3689
    neXtProt AC: NX_P05107
    UniProt: P05107

  • Chr Location
    21q22.3; chr21:44885949-44928873 (-)  GRCh38.p7
Human Diseases
more
  • Diseases
    2 with Itgb2 mouse models; 1 with human ITGB2 associations

Human Disease Mouse Models
      
IDs
 View 3 models
      
IDs
 View 5 models
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    2 with disease annotations
  • References
    7 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    97 phenotypes from 7 alleles in 15 genetic backgrounds
    10 phenotypes from multigenic genotypes
    6 images
    174 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygotes for targeted null and hypomorphic mutations are subject to granulocytosis, impaired inflammatory and immune responses, and chronic dermatitis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    64
  • GO References
    18
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    252
  • Tissues
    190
  • cDNA Data
    42
  • Literature Summary
    12
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000019985 VEGA Gene Model | MGI Sequence Detail 35457 C57BL/6J ±  kb
    transcript OTTMUST00000047620 VEGA | MGI Sequence Detail 2970 Not Applicable  
    polypeptide OTTMUSP00000021575 VEGA | MGI Sequence Detail 770 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      204 from dbSNP Build 142
    • RFLP
      2
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 64
      Genomic 13
      cDNA 44
      Primer pair 6
      Other 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-11490, MGD-MRK-1832, MGI:2143637
    References
    more
    • Summaries
      All 336
      Developmental Gene Expression 12
      Diseases 7
      Gene Ontology 18
      Phenotypes 174
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:265328 Yakubenko VP, et al., Oxidative modifications of extracellular matrix promote the second wave of inflammation via beta2 integrins. Blood. 2018 Jul 5;132(1):78-88
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
    Warranty Disclaimer & Copyright Notice
    Send questions and comments to User Support.     		last database update
    10/09/2018
    MGI 6.12     		The Jackson Laboratory