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9930021J03Rik Gene Detail
Summary
  • Symbol
    9930021J03Rik
  • Name
    RIKEN cDNA 9930021J03 gene
  • Synonyms
    Gm9832
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444398
    NCBI Gene: 240613
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:29714402-29805989 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 24.30 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    339 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444398
protein coding gene Chr19:29714402-29808053 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025027
protein coding gene Chr19:28190366-28282162 (-)
A/J MGP_AJ_G0025004
protein coding gene Chr19:26782899-26875722 (-)
AKR/J MGP_AKRJ_G0024972
protein coding gene Chr19:27729436-27827655 (-)
BALB/cJ MGP_BALBcJ_G0025003
protein coding gene Chr19:26818247-26912474 (-)
C3H/HeJ MGP_C3HHeJ_G0024759
protein coding gene Chr19:27707643-27803962 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025444
protein coding gene Chr19:28956588-29050363 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022863
protein coding gene Chr19:26727785-26822100 (-)
CAST/EiJ MGP_CASTEiJ_G0024229
protein coding gene Chr19:27544136-27642948 (-)
CBA/J MGP_CBAJ_G0024737
protein coding gene Chr19:30315125-30423606 (-)
DBA/2J MGP_DBA2J_G0024869
protein coding gene Chr19:26727629-26821954 (-)
FVB/NJ MGP_FVBNJ_G0024831
protein coding gene Chr19:26571975-26662112 (-)
LP/J MGP_LPJ_G0024954
protein coding gene Chr19:28181237-28279926 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024858
protein coding gene Chr19:30248305-30346806 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025499
protein coding gene Chr19:27754377-27847935 (-)
PWK/PhJ MGP_PWKPhJ_G0023977
protein coding gene Chr19:26392482-26486398 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023781
protein coding gene Chr19:27035981-27136914 (-)
WSB/EiJ MGP_WSBEiJ_G0024296
protein coding gene Chr19:27798876-27891447 (-)



Homology
more
  • Human Ortholog
    KIAA2026, KIAA2026
  • Vertebrate Orthologs
    9
  • Human Ortholog
    KIAA2026, KIAA2026
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 158358
    neXtProt AC: NX_Q5HYC2
    UniProt: Q5HYC2

  • Chr Location
    9p24.1; chr9:5860254-6008479 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046138 Ensembl Gene Model | MGI Sequence Detail 91588 C57BL/6J ±  kb
transcript ENSMUST00000177155 Ensembl | MGI Sequence Detail 6632 Not Applicable  
polypeptide ENSMUSP00000135473 Ensembl | MGI Sequence Detail 2027 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    8 Sequences
  • InterPro Domains
    IPR001487 Bromodomain
    IPR036427 Bromodomain-like superfamily
Molecular
Reagents
less
  • All nucleic 50
    cDNA 50

    Microarray probesets 4
Other
Accession IDs
less
MGI:3704495
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory