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Tbc1d24
Gene Detail
Symbol

Name
ID
Tbc1d24
TBC1 domain family, member 24
MGI:2443456
Synonyms
C530046L02Rik, mKIAA1171
Feature Type
protein coding gene
Genetic Map
Chromosome 17
12.30 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr17:24175431-24205562 bp, - strand
From NCBI annotation of GRCm38

  30132 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:27469  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TBC1D24
Gene Tree: Tbc1d24

Human
homologs
TBC1D24, TBC1 domain family, member 24
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 57465
neXtProt AC: NX_Q9ULP9

Human Synonyms: DFNA65, DFNB86, DOORS, EIEE16, FIME, TLDC6

Human Chr (Location): 16p13.3; chr16:2475146-2505733 (+)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human TBC1D24

Mutations,
alleles, and
phenotypes
All mutations/alleles(89) : Gene trapped(87) Targeted(2)
Incidental mutations (data from APF )
Interactions
Tbc1d24 interacts with 432 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process neuron projection development
Component cytoplasm
Function GTPase activator activity
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (103)    Tissues (10)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 103
cDNA source data(40)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase LOC100493941, tbc1d24.1 ; ZFIN tbc1d24    NEW 
Molecular
reagents
All nucleic(40) cDNA(40)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000036473 (Evidence)
Entrez Gene 224617 (Evidence)
UniGene 301585
DFCI TC1614427, TC1579490, TC1598165, TC1683552, TC1591779
DoTS DT.110552288, DT.40178875, DT.101737016, DT.110552266, DT.91332326, DT.60100914, DT.94237229, DT.91556966, DT.91582474, DT.94190770
Consensus CDS Project CCDS28477.1, CCDS50012.1
International Mouse Phenotyping Consortium Status Tbc1d24
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 224617 NCBI Gene Model | MGI Sequence Detail 30132 C57BL/6J ±  kb
transcript NM_001163852 RefSeq | MGI Sequence Detail 7946 C57BL/6 
polypeptide Q3UUG6 UniProt | EBI | MGI Sequence Detail 561 Not Applicable 

For the selected sequences
All sequences(67) RefSeq(16) UniProt(2)
Polymorphisms
SNPs within 2kb(273 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000195 Rab-GTPase-TBC domain
InterPro IPR006571 TLDc
Protein Ontology PR:000016108 TBC1 domain family member 24
Graphical View of Protein Domain Structure
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory