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Dcaf17
Gene Detail
Symbol

Name
ID
Dcaf17
DDB1 and CUL4 associated factor 17
MGI:1923013
Synonyms
2810055O12Rik, 4833418A01Rik, A030004A10Rik, A930009G19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 2
42.38 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:71055328-71099142 bp, + strand
From VEGA annotation of GRCm38

  43815 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:65979  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: DCAF17
Gene Tree: Dcaf17

Human
homologs
DCAF17, DDB1 and CUL4 associated factor 17
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 80067
neXtProt AC: NX_Q5H9S7

Human Synonyms: C2orf37

Human Chr (Location): 2q31.1; chr2:171434173-171491027 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human DCAF17

Mutations,
alleles, and
phenotypes
All mutations/alleles(12) : Gene trapped(10) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Dcaf17 interacts with 471 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process biological_process
Component Cul4-RING E3 ubiquitin ligase complex, integral component of membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (82)    Tissues (18)    Images (20)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 82
cDNA source data(86)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase dcaf17    NEW 
Molecular
reagents
All nucleic(89) cDNA(89)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000013153 (Evidence)
Ensembl Gene Model ENSMUSG00000041966 (Evidence)
Entrez Gene 75763 (Evidence)
UniGene 281668
DFCI TC1600999, TC1600113, TC1582104, TC1603582, TC1704217
DoTS DT.103568038, DT.101375050, DT.482975, DT.99841681
NIA Mouse Gene Index U068216, U001888
Consensus CDS Project CCDS16111.1, CCDS50601.1, CCDS50602.1
International Mouse Phenotyping Consortium Status Dcaf17
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000013153 VEGA Gene Model | MGI Sequence Detail 43815 C57BL/6J ±  kb
transcript OTTMUST00000031759 VEGA | MGI Sequence Detail 7739 Not Applicable 
polypeptide OTTMUSP00000014148 VEGA | MGI Sequence Detail 519 Not Applicable 

For the selected sequences
All sequences(85) RefSeq(18) UniProt(6)
Polymorphisms
SNPs within 2kb(430 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000031085 DDB1- and CUL4-associated factor 17
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)
Other
accession IDs
MGI:1919978, MGI:1925539, MGI:2138954, MGI:3028055

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory