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Supt7l
Gene Detail
Symbol

Name
ID
Supt7l
suppressor of Ty 7-like
MGI:1919445
Synonyms
2610524B01Rik, 6030455L14Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
17.27 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:31514569-31527807 bp, - strand
From VEGA annotation of GRCm38

  13239 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8907  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 2 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Supt7l

Human
homologs
Human Homolog SUPT7L, suppressor of Ty 7 (S. cerevisiae)-like
NCBI Gene ID 9913
neXtProt AC  NX_O94864
Human Synonyms  SPT7L, STAF65, STAF65G, STAF65(gamma), SUPT7H
Human Chr (Location)  2p23.3; chr2:27650809-27663973 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(13) : Gene trapped(9) Radiation induced(2) Targeted(2)
Genomic Mutations involving Supt7l (2)
Incidental mutations (data from Mutagenetix , APF )
Alleles Annotated to Human Diseases(1)   
Interactions
Supt7l interacts with 179 markers (Mir18, Mir24-1, Mir24-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (22)    Tissues (22)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 20
RT-PCR 2
cDNA source data(43)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(45) cDNA(44) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000028285 (Evidence)
Ensembl Gene ModelENSMUSG00000053134 (Evidence)
Entrez Gene72195 (Evidence)
UniGene164187
DFCITC1725184, TC1580599, TC1641796
DoTSDT.524528, DT.91328260, DT.91321645
NIA Mouse Gene IndexU149813
Consensus CDS ProjectCCDS19186.1
International Mouse Knockout Project StatusSupt7l
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028285 VEGA Gene Model | MGI Sequence Detail 13239 C57BL/6J ±  kb
transcript OTTMUST00000070086 VEGA | MGI Sequence Detail 2688 Not Applicable 
polypeptide OTTMUSP00000035679 VEGA | MGI Sequence Detail 412 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(2) UniProt(7)
Polymorphisms
SNPs within 2kb(52 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006565 Bromodomain transcription factor
Protein Ontology PR:000015838 STAGA complex 65 subunit gamma
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:1924975

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory